RNA–Protein interactions for RNA: ENST00000244763.8

SSR1-201, Transcript of signal sequence receptor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR1, Length 9,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-201ENST00000244763 SCN1BQ07699 218 aa7.18□□□□□ -1.26
SSR1-201ENST00000244763 SCRN3Q0VDG4 424 aa7.18□□□□□ -1.26
SSR1-201ENST00000244763 SP140Q13342 867 aa7.18□□□□□ -1.26
SSR1-201ENST00000244763 SOWAHAQ2M3V2 549 aa7.18□□□□□ -1.26
SSR1-201ENST00000244763 CHCHD4Q8N4Q1 142 aa7.18□□□□□ -1.26
SSR1-201ENST00000244763 SIDT2Q8NBJ9 832 aaKnown RBP7.18□□□□□ -1.26
SSR1-201ENST00000244763 OR10A6Q8NH74 314 aa7.18□□□□□ -1.26
SSR1-201ENST00000244763 PCDH19Q8TAB3 1148 aa7.18□□□□□ -1.26
SSR1-201ENST00000244763 FOXJ1Q92949 421 aa7.18□□□□□ -1.26
SSR1-201ENST00000244763 LGALS13Q9UHV8 139 aa7.18□□□□□ -1.26
SSR1-201ENST00000244763 MYH2Q9UKX2 1941 aa7.18□□□□□ -1.26
SSR1-201ENST00000244763 GMFGO60234 142 aa7.18□□□□□ -1.26
SSR1-201ENST00000244763 POP7O75817 140 aaKnown RBP7.18□□□□□ -1.26
SSR1-201ENST00000244763 F2P00734 622 aa7.18□□□□□ -1.26
SSR1-201ENST00000244763 MLLT6P55198 1093 aaPredicted RBP7.18□□□□□ -1.26
SSR1-201ENST00000244763 SLBPQ14493 270 aaKnown RBP eCLIP7.18□□□□□ -1.26
SSR1-201ENST00000244763 EMC10Q5UCC4 262 aa7.18□□□□□ -1.26
SSR1-201ENST00000244763 GRASPQ7Z6J2 395 aaPredicted RBP7.18□□□□□ -1.26
SSR1-201ENST00000244763 LDB1Q86U70 411 aaPredicted RBP7.18□□□□□ -1.26
SSR1-201ENST00000244763 FAM86B1Q8N7N1 296 aa7.18□□□□□ -1.26
SSR1-201ENST00000244763 PIGKQ92643 395 aa7.18□□□□□ -1.26
SSR1-201ENST00000244763 ALG3Q92685 438 aa7.18□□□□□ -1.26
SSR1-201ENST00000244763 NXPE2Q96DL1 559 aa7.18□□□□□ -1.26
SSR1-201ENST00000244763 ZNF570Q96NI8 536 aa7.18□□□□□ -1.26
SSR1-201ENST00000244763 IFT27Q9BW83 186 aa7.18□□□□□ -1.26
SSR1-201ENST00000244763 FLRT1Q9NZU1 646 aa7.18□□□□□ -1.26
SSR1-201ENST00000244763 DNAJB9Q9UBS3 223 aa7.18□□□□□ -1.26
SSR1-201ENST00000244763 EIF2B4Q9UI10 523 aaKnown RBP7.18□□□□□ -1.26
SSR1-201ENST00000244763 MYH10P35580 1976 aa7.18□□□□□ -1.26
SSR1-201ENST00000244763 C2orf74A8MZ97 194 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 ENPP3O14638 875 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 NUAK1O60285 661 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 OR1I1O60431 355 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 RYKP34925 604 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 ASPAP45381 313 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 NRG1Q02297 640 aaPredicted RBP7.17□□□□□ -1.26
SSR1-201ENST00000244763 CYP1B1Q16678 543 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 ZNF792Q3KQV3 632 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 PAOXQ6QHF9 649 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 ZNF550Q7Z398 422 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 TREML1Q86YW5 311 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 GPR65Q8IYL9 337 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 NODALQ96S42 347 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 CMKLR1Q99788 373 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 OR51V1Q9H2C8 321 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 RMI1Q9H9A7 625 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 ZIM2Q9NZV7 527 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 FMN2Q9NZ56 1722 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 SH3PXD2BA1X283 911 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 CXCR6O00574 342 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 NDUFS4O43181 175 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 FARS2O95363 451 aaKnown RBP7.17□□□□□ -1.26
SSR1-201ENST00000244763 LATS1O95835 1130 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 HAPLN1P10915 354 aaPredicted RBP7.17□□□□□ -1.26
SSR1-201ENST00000244763 GP1BBP13224 206 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 MTTPP55157 894 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 RALGPS2Q86X27 583 aaPredicted RBP7.17□□□□□ -1.26
SSR1-201ENST00000244763 FAM47BQ8NA70 645 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 MNTQ99583 582 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 WDR55Q9H6Y2 383 aaPredicted RBP7.17□□□□□ -1.26
SSR1-201ENST00000244763 SCML1Q9UN30 329 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 WASF3Q9UPY6 502 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 IQCF5A8MTL0 148 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 LAMTOR5O43504 91 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 BMP6P22004 513 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 SMSP52788 366 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 TAS2R39P59534 338 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 CXorf57Q6NSI4 855 aaKnown RBP7.17□□□□□ -1.26
SSR1-201ENST00000244763 ARHGAP22Q7Z5H3 698 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 CIR1Q86X95 450 aaPredicted RBP7.17□□□□□ -1.26
SSR1-201ENST00000244763 ZDHHC14Q8IZN3 488 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 KLK6Q92876 244 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 SLC17A7Q9P2U7 560 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 CDH22Q9UJ99 828 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 PCDHGB6Q9Y5F9 930 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 HAS3O00219 553 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 SYNGR4O95473 234 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 TGFB1P01137 390 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 CYP4B1P13584 511 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 GADD45AP24522 165 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 DNAJA1P31689 397 aaKnown RBP7.17□□□□□ -1.26
SSR1-201ENST00000244763 RBM34P42696 430 aaKnown RBP7.17□□□□□ -1.26
SSR1-201ENST00000244763 NRIP1P48552 1158 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 BTN3A2P78410 334 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 TARDBPQ13148 414 aaKnown RBP eCLIP7.17□□□□□ -1.262e-15■■□□□ 11.6
SSR1-201ENST00000244763 CRB2Q5IJ48 1285 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 SETD6Q8TBK2 473 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 PEX13Q92968 403 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.17□□□□□ -1.26
SSR1-201ENST00000244763 NLGN3Q9NZ94 848 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 NADKO95544 446 aaPredicted RBP7.17□□□□□ -1.26
SSR1-201ENST00000244763 EBLN1P0CF75 366 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 ITGA3P26006 1051 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 CCNHP51946 323 aaPredicted RBP7.17□□□□□ -1.26
SSR1-201ENST00000244763 LSM3P62310 102 aaKnown RBP7.17□□□□□ -1.26
SSR1-201ENST00000244763 ARF5P84085 180 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 IRF5Q13568 498 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 FAM174BQ3ZCQ3 159 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 TMIGD1Q6UXZ0 262 aa7.17□□□□□ -1.26
SSR1-201ENST00000244763 OR5K1Q8NHB7 308 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms