RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 WDR5BQ86VZ2 330 aa16.49■□□□□ 0.23
CDKN1A-201ENST00000244741 DHFR2Q86XF0 187 aa16.49■□□□□ 0.23
CDKN1A-201ENST00000244741 ZNF547Q8IVP9 402 aa16.49■□□□□ 0.23
CDKN1A-201ENST00000244741 SLC22A18ASQ8N1D0 253 aa16.49■□□□□ 0.23
CDKN1A-201ENST00000244741 ASB12Q8WXK4 309 aa16.49■□□□□ 0.23
CDKN1A-201ENST00000244741 ESAMQ96AP7 390 aa16.49■□□□□ 0.23
CDKN1A-201ENST00000244741 EME1Q96AY2 570 aa16.49■□□□□ 0.23
CDKN1A-201ENST00000244741 SLC52A3Q9NQ40 469 aa16.49■□□□□ 0.23
CDKN1A-201ENST00000244741 CNOT11Q9UKZ1 510 aaKnown RBP16.49■□□□□ 0.23
CDKN1A-201ENST00000244741 PNMA8BQ9ULN7 279 aaPredicted RBP16.49■□□□□ 0.23
CDKN1A-201ENST00000244741 CACNB4O00305 520 aaPredicted RBP16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 CRCPO75575 148 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 MATN4O95460 622 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 OR56A5P0C7T3 313 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 RPS3P23396 243 aaKnown RBP eCLIP16.48■□□□□ 0.233e-9■■□□□ 11.5
CDKN1A-201ENST00000244741 ITPKAP23677 461 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 IRX1P78414 480 aaPredicted RBP16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 BOP1Q14137 746 aaKnown RBP16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 ANGPT1Q15389 498 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 ENPP7Q6UWV6 458 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 SLC36A4Q6YBV0 504 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 MACC1Q6ZN28 852 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 DENND6BQ8NEG7 585 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 CADM4Q8NFZ8 388 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 CD200R1Q8TD46 325 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 TSACCQ96A04 125 aaPredicted RBP16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 FGF22Q9HCT0 170 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 TRMT6Q9UJA5 497 aaKnown RBP16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 PCTPQ9UKL6 214 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 PCDHB1Q9Y5F3 818 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 SNX13Q9Y5W8 968 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 GPR45Q9Y5Y3 372 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 C7orf72A4D263 438 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 ZNF839A8K0R7 811 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 FXYD1O00168 92 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 STX16O14662 325 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 ANGPT2O15123 496 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 PGM3O95394 542 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 CEACAM5P06731 702 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 PABPC4LP0CB38 370 aaKnown RBP16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 ATP6V1B2P21281 511 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 CD27P26842 260 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 CCR7P32248 378 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 HSPA13P48723 471 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 DHPSP49366 369 aaPredicted RBP16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 CLCN7P51798 805 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 PFN3P60673 137 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 MYBPC1Q00872 1141 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 GTF2H3Q13889 308 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 CAPRIN1Q14444 709 aaKnown RBP16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 RPS6KA2Q15349 733 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 LPAL2Q16609 132 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 NRF1Q16656 503 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 HMBOX1Q6NT76 420 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 SCIMPQ6UWF3 145 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 AMIGO2Q86SJ2 522 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 SATL1Q86VE3 508 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 SLC15A3Q8IY34 581 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 GALNT15Q8N3T1 639 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 FAM110BQ8TC76 370 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 LINGO1Q96FE5 620 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 PDXPQ96GD0 296 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 HOPXQ9BPY8 73 aaPredicted RBP16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 HGH1Q9BTY7 390 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 C1QTNF3Q9BXJ4 246 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 ABCD2Q9UBJ2 740 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 PLEKHM1Q9Y4G2 1056 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 ASB1Q9Y576 335 aa16.48■□□□□ 0.23
CDKN1A-201ENST00000244741 CCDC163A0A0D9SF12 145 aa16.47■□□□□ 0.23
CDKN1A-201ENST00000244741 THEGLP0DJG4 465 aa16.47■□□□□ 0.23
CDKN1A-201ENST00000244741 IL2P60568 153 aa16.47■□□□□ 0.23
CDKN1A-201ENST00000244741 HSPA14Q0VDF9 509 aa16.47■□□□□ 0.23
CDKN1A-201ENST00000244741 MTX3Q5HYI7 312 aa16.47■□□□□ 0.23
CDKN1A-201ENST00000244741 BLOC1S3Q6QNY0 202 aa16.47■□□□□ 0.23
CDKN1A-201ENST00000244741 CPNE9Q8IYJ1 553 aa16.47■□□□□ 0.23
CDKN1A-201ENST00000244741 MINDY1Q8N5J2 469 aa16.47■□□□□ 0.23
CDKN1A-201ENST00000244741 ELMO1Q92556 727 aa16.47■□□□□ 0.23
CDKN1A-201ENST00000244741 KCNJ9Q92806 393 aa16.47■□□□□ 0.23
CDKN1A-201ENST00000244741 ZCCHC2Q9C0B9 1178 aaKnown RBP16.47■□□□□ 0.23
CDKN1A-201ENST00000244741 CMTM6Q9NX76 183 aa16.47■□□□□ 0.23
CDKN1A-201ENST00000244741 SLC23A2Q9UGH3 650 aa16.47■□□□□ 0.23
CDKN1A-201ENST00000244741 VPS4BO75351 444 aa16.47■□□□□ 0.23
CDKN1A-201ENST00000244741 ESRRBO95718 433 aa16.47■□□□□ 0.23
CDKN1A-201ENST00000244741 WNT1P04628 370 aa16.47■□□□□ 0.23
CDKN1A-201ENST00000244741 PRR35P0CG20 571 aa16.47■□□□□ 0.23
CDKN1A-201ENST00000244741 IDO1P14902 403 aa16.47■□□□□ 0.23
CDKN1A-201ENST00000244741 GSTT1P30711 240 aa16.47■□□□□ 0.23
CDKN1A-201ENST00000244741 GRIA3P42263 894 aa16.47■□□□□ 0.23
CDKN1A-201ENST00000244741 RBBP7Q16576 425 aa16.47■□□□□ 0.23
CDKN1A-201ENST00000244741 PRAMEF14Q5SWL7 426 aa16.47■□□□□ 0.23
CDKN1A-201ENST00000244741 LPCAT2Q7L5N7 544 aa16.47■□□□□ 0.23
CDKN1A-201ENST00000244741 CHST15Q7LFX5 561 aaPredicted RBP16.47■□□□□ 0.23
CDKN1A-201ENST00000244741 GPSM1Q86YR5 675 aa16.47■□□□□ 0.23
CDKN1A-201ENST00000244741 CANT1Q8WVQ1 401 aa16.47■□□□□ 0.23
CDKN1A-201ENST00000244741 GAB3Q8WWW8 586 aa16.47■□□□□ 0.23
CDKN1A-201ENST00000244741 TEX37Q96LM6 180 aa16.47■□□□□ 0.23
CDKN1A-201ENST00000244741 NOL11Q9H8H0 719 aaKnown RBP16.47■□□□□ 0.23
CDKN1A-201ENST00000244741 DMTF1Q9Y222 760 aa16.47■□□□□ 0.23
CDKN1A-201ENST00000244741 HS3ST3A1Q9Y663 406 aa16.47■□□□□ 0.23
CDKN1A-201ENST00000244741 PLXND1Q9Y4D7 1925 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms