RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 STRA6Q9BX79 667 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 ABCG5Q9H222 651 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 CARS2Q9HA77 564 aaKnown RBP12.59□□□□□ -0.39
VAMP4-201ENST00000236192 MS4A12Q9NXJ0 267 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 BCL9O00512 1426 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 MYH1P12882 1939 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 SLIT3O75094 1523 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 A0A1W2PQL4 384 aaPredicted RBP12.58□□□□□ -0.39
VAMP4-201ENST00000236192 TCP10L2B9ZVM9 353 aa12.58□□□□□ -0.39
VAMP4-201ENST00000236192 M0QZ92 97 aa12.58□□□□□ -0.39
VAMP4-201ENST00000236192 PAPSS2O95340 614 aaPredicted RBP12.58□□□□□ -0.39
VAMP4-201ENST00000236192 S100A8P05109 93 aa12.58□□□□□ -0.39
VAMP4-201ENST00000236192 SPNP16150 400 aa12.58□□□□□ -0.39
VAMP4-201ENST00000236192 IL2P60568 153 aa12.58□□□□□ -0.39
VAMP4-201ENST00000236192 ADARB1P78563 741 aaKnown RBP12.58□□□□□ -0.39
VAMP4-201ENST00000236192 GPR158Q5T848 1215 aa12.58□□□□□ -0.39
VAMP4-201ENST00000236192 GDPGP1Q6ZNW5 385 aa12.58□□□□□ -0.39
VAMP4-201ENST00000236192 SVBPQ8N300 66 aa12.58□□□□□ -0.39
VAMP4-201ENST00000236192 SYNPOQ8N3V7 929 aa12.58□□□□□ -0.39
VAMP4-201ENST00000236192 CLRN3Q8NCR9 226 aa12.58□□□□□ -0.39
VAMP4-201ENST00000236192 FOPNLQ96NB1 174 aa12.58□□□□□ -0.39
VAMP4-201ENST00000236192 OR51E2Q9H255 320 aa12.58□□□□□ -0.39
VAMP4-201ENST00000236192 TNKS2Q9H2K2 1166 aa12.58□□□□□ -0.39
VAMP4-201ENST00000236192 SDHAF2Q9NX18 166 aa12.58□□□□□ -0.39
VAMP4-201ENST00000236192 PADI2Q9Y2J8 665 aa12.58□□□□□ -0.39
VAMP4-201ENST00000236192 FABP1P07148 127 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 ADORA3P0DMS8 318 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 HMGB2P26583 209 aaKnown RBP12.58□□□□□ -0.4
VAMP4-201ENST00000236192 ICAM3P32942 547 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 SLC25A11Q02978 314 aaKnown RBP12.58□□□□□ -0.4
VAMP4-201ENST00000236192 TTLL9Q3SXZ7 439 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 USP39Q53GS9 565 aaKnown RBP12.58□□□□□ -0.4
VAMP4-201ENST00000236192 ADNP2Q6IQ32 1131 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 ZSWIM9Q86XI8 627 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 CSPG4P5Q96PW8 444 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 DNTTIP1Q9H147 329 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 MAGIXQ9H6Y5 334 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 C11orf16Q9NQ32 467 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 KCTD5Q9NXV2 234 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 ASB4Q9Y574 426 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 PREX1Q8TCU6 1659 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 PIK3C2BO00750 1634 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 ENTPD6O75354 484 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 CLTBP09497 229 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 NMBRP28336 390 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 CDH12P55289 794 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 SYT6Q5T7P8 510 aaPredicted RBP12.58□□□□□ -0.4
VAMP4-201ENST00000236192 TCEAL6Q6IPX3 200 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 NCEH1Q6PIU2 408 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 B3GNT8Q7Z7M8 397 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 TCTE3Q8IZS6 198 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 KDM1BQ8NB78 822 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 DYNC2LI1Q8TCX1 351 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 DCLRE1CQ96SD1 692 aaKnown RBP12.58□□□□□ -0.4
VAMP4-201ENST00000236192 S100A13Q99584 98 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 USB1Q9BQ65 265 aaKnown RBP12.58□□□□□ -0.4
VAMP4-201ENST00000236192 SPNS1Q9H2V7 528 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 FN3KQ9H479 309 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 FBRSL1Q9HCM7 1045 aaKnown RBP12.58□□□□□ -0.4
VAMP4-201ENST00000236192 ACOXLQ9NUZ1 547 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 ANGPT4Q9Y264 503 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 TLR6Q9Y2C9 796 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 PPP2R3BQ9Y5P8 575 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 MYH2Q9UKX2 1941 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 TEX13CA0A0J9YWL9 993 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 E9PI62 339 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 SLC9A3R1O14745 358 aaPredicted RBP12.58□□□□□ -0.4
VAMP4-201ENST00000236192 OAZ2O95190 189 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 ITGAMP11215 1152 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 CCR1P32246 355 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 GZMKP49863 264 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 ILDR2Q71H61 639 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 LMO3Q8TAP4 145 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 NANPQ8TBE9 248 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 GTPBP3Q969Y2 492 aaKnown RBP12.58□□□□□ -0.4
VAMP4-201ENST00000236192 CELF6Q96J87 481 aaKnown RBP12.58□□□□□ -0.4
VAMP4-201ENST00000236192 THUMPD1Q9NXG2 353 aaKnown RBP12.58□□□□□ -0.4
VAMP4-201ENST00000236192 EXTL2Q9UBQ6 330 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 DCLK1O15075 740 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 STSP08842 583 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 RAB5CP51148 216 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 FCGRTP55899 365 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 TAS2R39P59534 338 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 NOMO2Q5JPE7 1267 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 TRAPPC3LQ5T215 181 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 MAMDC4Q6UXC1 1216 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 CEP97Q8IW35 865 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 PCNPQ8WW12 178 aaKnown RBP12.58□□□□□ -0.4
VAMP4-201ENST00000236192 OR51J1Q9H342 316 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 ATXN3LQ9H3M9 355 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 AGO4Q9HCK5 861 aaKnown RBP12.58□□□□□ -0.4
VAMP4-201ENST00000236192 PRKAG2Q9UGJ0 569 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 COPS3Q9UNS2 423 aa12.58□□□□□ -0.4
VAMP4-201ENST00000236192 M0R036 132 aa12.57□□□□□ -0.4
VAMP4-201ENST00000236192 CTDSP2O14595 271 aa12.57□□□□□ -0.4
VAMP4-201ENST00000236192 EEDO75530 441 aaKnown RBP12.57□□□□□ -0.4
VAMP4-201ENST00000236192 KRT33AO76009 404 aa12.57□□□□□ -0.4
VAMP4-201ENST00000236192 ALPLP05186 524 aa12.57□□□□□ -0.4
VAMP4-201ENST00000236192 UFM1P61960 85 aa12.57□□□□□ -0.4
VAMP4-201ENST00000236192 ZBTB37Q5TC79 503 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms