RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 ZDHHC4Q9NPG8 344 aa8.89□□□□□ -0.99
SYDE2-201ENST00000234668 KCTD5Q9NXV2 234 aa8.89□□□□□ -0.99
SYDE2-201ENST00000234668 ZDHHC3Q9NYG2 299 aa8.89□□□□□ -0.99
SYDE2-201ENST00000234668 KIAA1522Q9P206 1035 aaPredicted RBP8.89□□□□□ -0.99
SYDE2-201ENST00000234668 MYO9BQ13459 2157 aa8.89□□□□□ -0.99
SYDE2-201ENST00000234668 TRBV5-4A0A0C4DH59 114 aa8.89□□□□□ -0.99
SYDE2-201ENST00000234668 LOC100130705A0A1B0GUX0 176 aa8.89□□□□□ -0.99
SYDE2-201ENST00000234668 TULP3O75386 442 aa8.89□□□□□ -0.99
SYDE2-201ENST00000234668 RPS3P23396 243 aaKnown RBP eCLIP8.89□□□□□ -0.99
SYDE2-201ENST00000234668 AOAHP28039 575 aa8.89□□□□□ -0.99
SYDE2-201ENST00000234668 DGKEP52429 567 aa8.89□□□□□ -0.99
SYDE2-201ENST00000234668 NOGQ13253 232 aa8.89□□□□□ -0.99
SYDE2-201ENST00000234668 MTA1Q13330 715 aa8.89□□□□□ -0.99
SYDE2-201ENST00000234668 NAE1Q13564 534 aa8.89□□□□□ -0.99
SYDE2-201ENST00000234668 MYBPC3Q14896 1274 aa8.89□□□□□ -0.99
SYDE2-201ENST00000234668 TBC1D25Q3MII6 688 aa8.89□□□□□ -0.99
SYDE2-201ENST00000234668 ZNF697Q5TEC3 545 aa8.89□□□□□ -0.99
SYDE2-201ENST00000234668 IRAK1BP1Q5VVH5 260 aa8.89□□□□□ -0.99
SYDE2-201ENST00000234668 TPRG1Q6ZUI0 275 aa8.89□□□□□ -0.99
SYDE2-201ENST00000234668 BTLAQ7Z6A9 289 aa8.89□□□□□ -0.99
SYDE2-201ENST00000234668 ZDHHC21Q8IVQ6 265 aa8.89□□□□□ -0.99
SYDE2-201ENST00000234668 ZNF555Q8NEP9 628 aa8.89□□□□□ -0.99
SYDE2-201ENST00000234668 TBC1D15Q8TC07 691 aa8.89□□□□□ -0.99
SYDE2-201ENST00000234668 GIPC3Q8TF64 312 aa8.89□□□□□ -0.99
SYDE2-201ENST00000234668 ZNF296Q8WUU4 475 aaPredicted RBP8.89□□□□□ -0.99
SYDE2-201ENST00000234668 USP7Q93009 1102 aa8.89□□□□□ -0.99
SYDE2-201ENST00000234668 ACDQ96AP0 544 aa8.89□□□□□ -0.99
SYDE2-201ENST00000234668 DTNBP1Q96EV8 351 aa8.89□□□□□ -0.99
SYDE2-201ENST00000234668 SAMD11Q96NU1 681 aa8.89□□□□□ -0.99
SYDE2-201ENST00000234668 RNF208Q9H0X6 261 aa8.89□□□□□ -0.99
SYDE2-201ENST00000234668 GORASP2Q9H8Y8 452 aa8.89□□□□□ -0.99
SYDE2-201ENST00000234668 DCAF13Q9NV06 445 aaKnown RBP8.89□□□□□ -0.99
SYDE2-201ENST00000234668 ITM2BQ9Y287 266 aa8.89□□□□□ -0.99
SYDE2-201ENST00000234668 MYO15AQ9UKN7 3530 aa8.89□□□□□ -0.99
SYDE2-201ENST00000234668 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.88□□□□□ -0.99
SYDE2-201ENST00000234668 TRIM64CA6NLI5 447 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 ETHE1O95571 254 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 NPPAP01160 153 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 LAMP1P11279 417 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 ACPPP15309 386 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 ENGP17813 658 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 TGFBR1P36897 503 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 BMXP51813 675 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 NAA20P61599 178 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 PPP2R2BQ00005 443 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 IRF8Q02556 426 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 NFATC3Q12968 1075 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 RAB33AQ14088 237 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 SPCS2Q15005 226 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 FXNQ16595 210 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 XKR6Q5GH73 641 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 PDE12Q6L8Q7 609 aaKnown RBP8.88□□□□□ -0.99
SYDE2-201ENST00000234668 NOXRED1Q6NXP6 359 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 GALNT18Q6P9A2 607 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 ZNF773Q6PK81 442 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 OTOP2Q7RTS6 562 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 DCP2Q8IU60 420 aaKnown RBP8.88□□□□□ -0.99
SYDE2-201ENST00000234668 SYT12Q8IV01 421 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 SLC39A11Q8N1S5 342 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 DRAXINQ8NBI3 349 aaPredicted RBP8.88□□□□□ -0.99
SYDE2-201ENST00000234668 PXYLP1Q8TE99 480 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 VWCEQ96DN2 955 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 TMEM121BQ9BXQ6 578 aaPredicted RBP8.88□□□□□ -0.99
SYDE2-201ENST00000234668 AASDHPPTQ9NRN7 309 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 TUBA8Q9NY65 449 aaPredicted RBP8.88□□□□□ -0.99
SYDE2-201ENST00000234668 STOML2Q9UJZ1 356 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 ANAPC1Q9H1A4 1944 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 ANTXRLA6NF34 631 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 ZBBXA8MT70 800 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 E7EQ34 232 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 PLK4O00444 970 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 OPN1SWP03999 348 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 OR56A5P0C7T3 313 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 CCNA2P20248 432 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 MSH3P20585 1137 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 PDHA2P29803 388 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 BDKRB1P46663 353 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 CCR3P51677 355 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 METAP1P53582 386 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 CTSCP53634 463 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 SH3BGRP55822 239 aaPredicted RBP8.88□□□□□ -0.99
SYDE2-201ENST00000234668 SNRPD1P62314 119 aaKnown RBP8.88□□□□□ -0.99
SYDE2-201ENST00000234668 NTHL1P78549 312 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 MEF2AQ02078 507 aaPredicted RBP8.88□□□□□ -0.99
SYDE2-201ENST00000234668 DEFB115Q30KQ5 88 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 ARSIQ5FYB1 569 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 BROXQ5VW32 411 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 TPGS2Q68CL5 300 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 C22orf39Q6P5X5 142 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 USP45Q70EL2 814 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 LSRQ86X29 649 aaPredicted RBP8.88□□□□□ -0.99
SYDE2-201ENST00000234668 RNF168Q8IYW5 571 aaPredicted RBP8.88□□□□□ -0.99
SYDE2-201ENST00000234668 ARL10Q8N8L6 244 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 ADAMTS16Q8TE57 1224 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 ASB11Q8WXH4 323 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 SH3KBP1Q96B97 665 aa8.88□□□□□ -0.99
SYDE2-201ENST00000234668 TRMT2BQ96GJ1 504 aaKnown RBP8.88□□□□□ -0.99
SYDE2-201ENST00000234668 CPPED1Q9BRF8 314 aaPredicted RBP8.88□□□□□ -0.99
SYDE2-201ENST00000234668 RIOK2Q9BVS4 552 aaKnown RBP8.88□□□□□ -0.99
SYDE2-201ENST00000234668 ERVK-18Q9QC07 812 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms