RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 DFNA5O60443 496 aa13.49□□□□□ -0.25
HCFC2-201ENST00000229330 ENTPD6O75354 484 aa13.49□□□□□ -0.25
HCFC2-201ENST00000229330 PIGRP01833 764 aa13.49□□□□□ -0.25
HCFC2-201ENST00000229330 HIST1H2ABP04908 130 aa13.49□□□□□ -0.25
HCFC2-201ENST00000229330 CCR4P51679 360 aa13.49□□□□□ -0.25
HCFC2-201ENST00000229330 ZNF280AP59817 542 aaPredicted RBP13.49□□□□□ -0.25
HCFC2-201ENST00000229330 PPP2R2DQ66LE6 453 aa13.49□□□□□ -0.25
HCFC2-201ENST00000229330 LCN8Q6JVE9 175 aa13.49□□□□□ -0.25
HCFC2-201ENST00000229330 CAPN13Q6MZZ7 669 aaPredicted RBP13.49□□□□□ -0.25
HCFC2-201ENST00000229330 CES5AQ6NT32 575 aa13.49□□□□□ -0.25
HCFC2-201ENST00000229330 CYS1Q717R9 158 aa13.49□□□□□ -0.25
HCFC2-201ENST00000229330 HIST3H2AQ7L7L0 130 aa13.49□□□□□ -0.25
HCFC2-201ENST00000229330 DNAJB7Q7Z6W7 309 aaPredicted RBP13.49□□□□□ -0.25
HCFC2-201ENST00000229330 TMPRSS11BQ86T26 416 aa13.49□□□□□ -0.25
HCFC2-201ENST00000229330 AMIGO3Q86WK7 504 aa13.49□□□□□ -0.25
HCFC2-201ENST00000229330 SNX33Q8WV41 574 aa13.49□□□□□ -0.25
HCFC2-201ENST00000229330 HIST1H2ACQ93077 130 aa13.49□□□□□ -0.25
HCFC2-201ENST00000229330 MYRFLQ96LU7 910 aa13.49□□□□□ -0.25
HCFC2-201ENST00000229330 CD93Q9NPY3 652 aa13.49□□□□□ -0.25
HCFC2-201ENST00000229330 TMEM39AQ9NV64 488 aa13.49□□□□□ -0.25
HCFC2-201ENST00000229330 ERVK13-1Q9NX77 482 aa13.49□□□□□ -0.25
HCFC2-201ENST00000229330 N6AMT1Q9Y5N5 214 aa13.49□□□□□ -0.25
HCFC2-201ENST00000229330 SMIM28A0A1B0GU29 152 aa13.49□□□□□ -0.25
HCFC2-201ENST00000229330 UPK1BO75841 260 aa13.49□□□□□ -0.25
HCFC2-201ENST00000229330 SNAPC5O75971 98 aa13.49□□□□□ -0.25
HCFC2-201ENST00000229330 PRPS1L1P21108 318 aa13.49□□□□□ -0.25
HCFC2-201ENST00000229330 CRYBB1P53674 252 aaPredicted RBP13.49□□□□□ -0.25
HCFC2-201ENST00000229330 PCDH1Q08174 1060 aa13.49□□□□□ -0.25
HCFC2-201ENST00000229330 HNRNPA0Q13151 305 aaKnown RBP13.49□□□□□ -0.25
HCFC2-201ENST00000229330 SCARB2Q14108 478 aa13.49□□□□□ -0.25
HCFC2-201ENST00000229330 ITIH5Q86UX2 942 aa13.49□□□□□ -0.25
HCFC2-201ENST00000229330 SRFBP1Q8NEF9 429 aaKnown RBP13.49□□□□□ -0.25
HCFC2-201ENST00000229330 TOR1AIP2Q8NFQ8 470 aa13.49□□□□□ -0.25
HCFC2-201ENST00000229330 NTAN1Q96AB6 310 aa13.49□□□□□ -0.25
HCFC2-201ENST00000229330 TMEM80Q96HE8 168 aa13.49□□□□□ -0.25
HCFC2-201ENST00000229330 RNF208Q9H0X6 261 aa13.49□□□□□ -0.25
HCFC2-201ENST00000229330 SPG21Q9NZD8 308 aa13.49□□□□□ -0.25
HCFC2-201ENST00000229330 ZNF69Q9UC07 566 aa13.49□□□□□ -0.25
HCFC2-201ENST00000229330 A0A1W2PQH9 124 aa13.49□□□□□ -0.25
HCFC2-201ENST00000229330 ATE1O95260 518 aa13.49□□□□□ -0.25
HCFC2-201ENST00000229330 PRKAR2AP13861 404 aaKnown RBP13.49□□□□□ -0.25
HCFC2-201ENST00000229330 CPN2P22792 545 aa13.49□□□□□ -0.25
HCFC2-201ENST00000229330 DAOAP59103 153 aa13.49□□□□□ -0.25
HCFC2-201ENST00000229330 CHADLQ6NUI6 762 aa13.49□□□□□ -0.25
HCFC2-201ENST00000229330 PGBD3Q8N328 593 aa13.49□□□□□ -0.25
HCFC2-201ENST00000229330 MGME1Q9BQP7 344 aa13.49□□□□□ -0.25
HCFC2-201ENST00000229330 GOLGA2P5Q9HBQ8 144 aa13.49□□□□□ -0.25
HCFC2-201ENST00000229330 FZD4Q9ULV1 537 aa13.49□□□□□ -0.25
HCFC2-201ENST00000229330 FXYD6-FXYD2A0A087WZ82 144 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 GLTPD2A6NH11 291 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 SCNN1AP37088 669 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 PON2Q15165 354 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 SDHAF4Q5VUM1 108 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 PIM3Q86V86 326 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 KIF18BQ86Y91 864 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 OR10H4Q8NGA5 316 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 CCDC3Q9BQI4 270 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 HERPUD2Q9BSE4 406 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 FXYD6Q9H0Q3 95 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 FKBPLQ9UIM3 349 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 IFT52Q9Y366 437 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 PTPRJQ12913 1337 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 CNTNAP1P78357 1384 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 RIIAD1A6NNX1 92 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 KPNA3O00505 521 aaPredicted RBP13.48□□□□□ -0.25
HCFC2-201ENST00000229330 ZNF432O94892 652 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 TLX1P31314 330 aaPredicted RBP13.48□□□□□ -0.25
HCFC2-201ENST00000229330 SP3Q02447 781 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 ST3GAL4Q11206 333 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 SLC39A4Q6P5W5 647 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 TFAP2CQ92754 450 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 LPPQ93052 612 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 UROC1Q96N76 676 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 C3orf14Q9HBI5 128 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 OR2AT4A6NND4 320 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 FAM47E-STBD1D6RA91 191 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 TEX28O15482 410 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 HLA-DPB1P04440 258 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 CD247P20963 164 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 ZNF10P21506 573 aaPredicted RBP13.48□□□□□ -0.25
HCFC2-201ENST00000229330 DIO3P55073 304 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 EMX2Q04743 252 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 FAM110CQ1W6H9 321 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 PIWIL3Q7Z3Z3 882 aaKnown RBP13.48□□□□□ -0.25
HCFC2-201ENST00000229330 PM20D2Q8IYS1 436 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 CFAP52Q8N1V2 620 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 LILRB4Q8NHJ6 448 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 TNKS2Q9H2K2 1166 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 ARL5AQ9Y689 179 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 FFAR2O15552 330 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 TPST2O60704 377 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 TBL1XO60907 577 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 TSPAN5P62079 268 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 SEMA3AQ14563 771 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 UGT8Q16880 541 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 ATP13A5Q4VNC0 1218 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 RPTNQ6XPR3 784 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 DEDD2Q8WXF8 326 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 IL1RAPQ9NPH3 570 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 FLRT1Q9NZU1 646 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms