RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 PIK3R3Q92569 461 aa13.74□□□□□ -0.21
SF1-201ENST00000227503 PDLIM5Q96HC4 596 aaKnown RBP13.74□□□□□ -0.21
SF1-201ENST00000227503 RNF170Q96K19 258 aa13.74□□□□□ -0.21
SF1-201ENST00000227503 OR2A14Q96R47 310 aa13.74□□□□□ -0.21
SF1-201ENST00000227503 ZYG11BQ9C0D3 744 aa13.74□□□□□ -0.21
SF1-201ENST00000227503 PADI3Q9ULW8 664 aa13.74□□□□□ -0.21
SF1-201ENST00000227503 KLHL20Q9Y2M5 609 aa13.74□□□□□ -0.21
SF1-201ENST00000227503 MEIOCA2RUB1 952 aa13.74□□□□□ -0.21
SF1-201ENST00000227503 TYW5A2RUC4 315 aaKnown RBP13.74□□□□□ -0.21
SF1-201ENST00000227503 CLDN24A6NM45 220 aa13.74□□□□□ -0.21
SF1-201ENST00000227503 CREG1O75629 220 aa13.74□□□□□ -0.21
SF1-201ENST00000227503 FHP07954 510 aa13.74□□□□□ -0.21
SF1-201ENST00000227503 HOXA9P31269 272 aa13.74□□□□□ -0.21
SF1-201ENST00000227503 PWP1Q13610 501 aa13.74□□□□□ -0.21
SF1-201ENST00000227503 TRIM60Q495X7 471 aa13.74□□□□□ -0.21
SF1-201ENST00000227503 SDHAF4Q5VUM1 108 aa13.74□□□□□ -0.21
SF1-201ENST00000227503 CPZQ66K79 652 aa13.74□□□□□ -0.21
SF1-201ENST00000227503 LETMD1Q6P1Q0 360 aa13.74□□□□□ -0.21
SF1-201ENST00000227503 SERINC5Q86VE9 423 aa13.74□□□□□ -0.21
SF1-201ENST00000227503 SCN4BQ8IWT1 228 aa13.74□□□□□ -0.21
SF1-201ENST00000227503 GIPC2Q8TF65 315 aa13.74□□□□□ -0.21
SF1-201ENST00000227503 GTF2H4Q92759 462 aa13.74□□□□□ -0.21
SF1-201ENST00000227503 CCDC120Q96HB5 630 aa13.74□□□□□ -0.21
SF1-201ENST00000227503 COPS4Q9BT78 406 aa13.74□□□□□ -0.21
SF1-201ENST00000227503 SP110Q9HB58 689 aa13.74□□□□□ -0.21
SF1-201ENST00000227503 TIGARQ9NQ88 270 aa13.74□□□□□ -0.21
SF1-201ENST00000227503 PDP1Q9P0J1 537 aaPredicted RBP13.74□□□□□ -0.21
SF1-201ENST00000227503 ZMYM5Q9UJ78 669 aa13.74□□□□□ -0.21
SF1-201ENST00000227503 BTN3A1O00481 513 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 SLC2A3P11169 496 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 BMP1P13497 986 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 SUOXP51687 545 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 ZNF45Q02386 682 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 BAK1Q16611 211 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 SPATS1Q496A3 300 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 SPANXN4Q5MJ08 99 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 MSANTD2Q6P1R3 559 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 CXCL17Q6UXB2 119 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 GLRX5Q86SX6 157 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 ZDHHC21Q8IVQ6 265 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 OMA1Q96E52 524 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 CEP19Q96LK0 163 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 VPS35Q96QK1 796 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 A0A0U1RQF3 1178 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 ARHGAP33O14559 1287 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 TYMPP19971 482 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 UQCRC1P31930 480 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 OR3A3P47888 321 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 TBX4P57082 545 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 ERVPABLB-1P60509 514 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 DOC2BQ14184 412 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 DSC3Q14574 896 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 YIF1BQ5BJH7 314 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 SGO1Q5FBB7 561 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 ARMC4Q5T2S8 1044 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 VTCN1Q7Z7D3 282 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 NOXA1Q86UR1 476 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.73□□□□□ -0.21
SF1-201ENST00000227503 ATG16L2Q8NAA4 619 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 SIMC1Q8NDZ2 872 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 IGSF8Q969P0 613 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 SMIM14Q96QK8 99 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 SCML2Q9UQR0 700 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 IGLV3-10A0A075B6K4 115 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 FFAR3O14843 346 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 GPR42O15529 346 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 CAPN1P07384 714 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 GPR15P49685 360 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 HUNKP57058 714 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 RPL38P63173 70 aaKnown RBP13.73□□□□□ -0.21
SF1-201ENST00000227503 CACNB2Q08289 660 aaPredicted RBP13.73□□□□□ -0.21
SF1-201ENST00000227503 FADDQ13158 208 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 SLC39A12Q504Y0 691 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 PXDC1Q5TGL8 231 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 GLCCI1Q86VQ1 547 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 MON1AQ86VX9 555 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 CCDC28AQ8IWP9 274 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 SETD9Q8NE22 299 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 GPR150Q8NGU9 434 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 KCNC2Q96PR1 638 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 ASB2Q96Q27 587 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 TTPALQ9BTX7 342 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 GORASP2Q9H8Y8 452 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 GPR83Q9NYM4 423 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 ZIM2Q9NZV7 527 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 KIF17Q9P2E2 1029 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 RABL2BQ9UNT1 228 aa13.73□□□□□ -0.21
SF1-201ENST00000227503 DOCK4Q8N1I0 1966 aa13.72□□□□□ -0.21
SF1-201ENST00000227503 OR6C70A6NIJ9 312 aa13.72□□□□□ -0.21
SF1-201ENST00000227503 CD3EAPO15446 510 aaKnown RBP13.72□□□□□ -0.21
SF1-201ENST00000227503 CAPN5O15484 640 aaPredicted RBP13.72□□□□□ -0.21
SF1-201ENST00000227503 RHOBTB1O94844 696 aa13.72□□□□□ -0.21
SF1-201ENST00000227503 PTHP01270 115 aa13.72□□□□□ -0.21
SF1-201ENST00000227503 PPP3CCP48454 512 aa13.72□□□□□ -0.21
SF1-201ENST00000227503 FAM189BP81408 668 aa13.72□□□□□ -0.21
SF1-201ENST00000227503 HOXC5Q00444 222 aa13.72□□□□□ -0.21
SF1-201ENST00000227503 PRKCDQ05655 676 aa13.72□□□□□ -0.21
SF1-201ENST00000227503 AP5B1Q2VPB7 878 aa13.72□□□□□ -0.21
SF1-201ENST00000227503 CDONQ4KMG0 1287 aa13.72□□□□□ -0.21
SF1-201ENST00000227503 TJAP1Q5JTD0 557 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms