RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 NUDT4Q9NZJ9 180 aa14.69□□□□□ -0.06
EFNB1-201ENST00000204961 SNX8Q9Y5X2 465 aa14.69□□□□□ -0.06
EFNB1-201ENST00000204961 A0A1W2PQ45 241 aaPredicted RBP14.68□□□□□ -0.06
EFNB1-201ENST00000204961 A0A1W2PQY0 241 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.68□□□□□ -0.06
EFNB1-201ENST00000204961 CBFA2T3O75081 653 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 EOMESO95936 686 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 F11P03951 625 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 PTNP21246 168 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 IRF8Q02556 426 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 MVKQ03426 396 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 EPS8Q12929 822 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 NAE1Q13564 534 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 STARD3Q14849 445 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 XKR6Q5GH73 641 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 XAF1Q6GPH4 301 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 LAIR1Q6GTX8 287 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 RAVER1Q8IY67 606 aaKnown RBP14.68□□□□□ -0.06
EFNB1-201ENST00000204961 ABHD11Q8NFV4 315 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 BPIFB1Q8TDL5 484 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 STON2Q8WXE9 905 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 RORBQ92753 470 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 PROX1Q92786 737 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 BORCS5Q969J3 196 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 CLSTN3Q9BQT9 956 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 BRINP2Q9C0B6 783 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 C1orf109Q9NX04 203 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 TMEM161AQ9NX61 479 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 PPT2Q9UMR5 302 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 SCN10AQ9Y5Y9 1956 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 A0A096LPI6 279 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 TMEM221A6NGB7 291 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 PLK4O00444 970 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 SYN3O14994 580 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 CLDN9O95484 217 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 DNTTP04053 509 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 ANXA5P08758 320 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 C21orf33P30042 268 aaPredicted RBP14.68□□□□□ -0.06
EFNB1-201ENST00000204961 BCAP31P51572 246 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 HTRA3P83110 453 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 GANABQ14697 944 aaKnown RBP14.68□□□□□ -0.06
EFNB1-201ENST00000204961 CBX2Q14781 532 aaPredicted RBP14.68□□□□□ -0.06
EFNB1-201ENST00000204961 TRIM71Q2Q1W2 868 aaKnown RBP14.68□□□□□ -0.06
EFNB1-201ENST00000204961 ZXDCQ2QGD7 858 aaPredicted RBP14.68□□□□□ -0.06
EFNB1-201ENST00000204961 USP41Q3LFD5 358 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 Q6ZVL8 140 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 BEND5Q7L4P6 421 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 ZNF551Q7Z340 670 aaPredicted RBP14.68□□□□□ -0.06
EFNB1-201ENST00000204961 PIK3C3Q8NEB9 887 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 NUSAP1Q9BXS6 441 aaKnown RBP14.68□□□□□ -0.06
EFNB1-201ENST00000204961 BTBD3Q9Y2F9 522 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 EVPLLA8MZ36 301 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 SLC1A7O00341 560 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 FPGTO14772 594 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 MT-ND2P03891 347 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 HMGCLP35914 325 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 CRATP43155 626 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 VLDLRP98155 873 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 TMEM53Q6P2H8 277 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 C11orf96Q7Z7L8 435 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 P2RY13Q9BPV8 354 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 CTPS2Q9NRF8 586 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 DNAJB9Q9UBS3 223 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 GNPTGQ9UJJ9 305 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 PADI4Q9UM07 663 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 YIPF1Q9Y548 306 aa14.68□□□□□ -0.06
EFNB1-201ENST00000204961 VWA8A3KMH1 1905 aa14.67□□□□□ -0.06
EFNB1-201ENST00000204961 A0A0G2JN53 185 aa14.67□□□□□ -0.06
EFNB1-201ENST00000204961 KDM1AO60341 852 aa14.67□□□□□ -0.06
EFNB1-201ENST00000204961 NDUFS2O75306 463 aa14.67□□□□□ -0.06
EFNB1-201ENST00000204961 SERPINB7O75635 380 aa14.67□□□□□ -0.06
EFNB1-201ENST00000204961 PGLSO95336 258 aa14.67□□□□□ -0.06
EFNB1-201ENST00000204961 EMX1Q04741 257 aaPredicted RBP14.67□□□□□ -0.06
EFNB1-201ENST00000204961 NEK5Q6P3R8 708 aa14.67□□□□□ -0.06
EFNB1-201ENST00000204961 CYP2U1Q7Z449 544 aa14.67□□□□□ -0.06
EFNB1-201ENST00000204961 DSG4Q86SJ6 1040 aa14.67□□□□□ -0.06
EFNB1-201ENST00000204961 RIMKLAQ8IXN7 391 aa14.67□□□□□ -0.06
EFNB1-201ENST00000204961 PIH1D2Q8WWB5 315 aa14.67□□□□□ -0.06
EFNB1-201ENST00000204961 COPS8Q99627 209 aa14.67□□□□□ -0.06
EFNB1-201ENST00000204961 HEPHQ9BQS7 1158 aa14.67□□□□□ -0.06
EFNB1-201ENST00000204961 AASDHPPTQ9NRN7 309 aa14.67□□□□□ -0.06
EFNB1-201ENST00000204961 FAM155AB1AL88 458 aaPredicted RBP14.67□□□□□ -0.06
EFNB1-201ENST00000204961 ANKRD28O15084 1053 aa14.67□□□□□ -0.06
EFNB1-201ENST00000204961 IGLV3-27P01718 113 aa14.67□□□□□ -0.06
EFNB1-201ENST00000204961 KRT6AP02538 564 aa14.67□□□□□ -0.06
EFNB1-201ENST00000204961 KRT6BP04259 564 aa14.67□□□□□ -0.06
EFNB1-201ENST00000204961 PRR35P0CG20 571 aa14.67□□□□□ -0.06
EFNB1-201ENST00000204961 HMGA1P17096 107 aaKnown RBP14.67□□□□□ -0.06
EFNB1-201ENST00000204961 KRT6CP48668 564 aa14.67□□□□□ -0.06
EFNB1-201ENST00000204961 CLK1P49759 484 aaKnown RBP14.67□□□□□ -0.06
EFNB1-201ENST00000204961 VEPH1Q14D04 833 aa14.67□□□□□ -0.06
EFNB1-201ENST00000204961 TTC23Q5W5X9 447 aa14.67□□□□□ -0.06
EFNB1-201ENST00000204961 ARMCX6Q7L4S7 300 aa14.67□□□□□ -0.06
EFNB1-201ENST00000204961 EFL1Q7Z2Z2 1120 aaKnown RBP14.67□□□□□ -0.06
EFNB1-201ENST00000204961 DCP2Q8IU60 420 aaKnown RBP14.67□□□□□ -0.06
EFNB1-201ENST00000204961 SCML4Q8N228 414 aa14.67□□□□□ -0.06
EFNB1-201ENST00000204961 ASCC3Q8N3C0 2202 aaKnown RBP14.67□□□□□ -0.06
EFNB1-201ENST00000204961 CORO1BQ9BR76 489 aa14.67□□□□□ -0.06
EFNB1-201ENST00000204961 MRGBPQ9NV56 204 aa14.67□□□□□ -0.06
EFNB1-201ENST00000204961 CAB39Q9Y376 341 aaPredicted RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms