RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 CTXN3Q4LDR2 81 aa16.32■□□□□ 0.2
CTDP1-201ENST00000075430 AFTPHQ6ULP2 937 aa16.32■□□□□ 0.2
CTDP1-201ENST00000075430 EFL1Q7Z2Z2 1120 aaKnown RBP16.32■□□□□ 0.2
CTDP1-201ENST00000075430 LMNTD1Q8N9Z9 388 aa16.32■□□□□ 0.2
CTDP1-201ENST00000075430 SETD9Q8NE22 299 aa16.32■□□□□ 0.2
CTDP1-201ENST00000075430 ACBD6Q9BR61 282 aa16.32■□□□□ 0.2
CTDP1-201ENST00000075430 BRINP2Q9C0B6 783 aa16.32■□□□□ 0.2
CTDP1-201ENST00000075430 MUC13Q9H3R2 512 aa16.32■□□□□ 0.2
CTDP1-201ENST00000075430 TRPV5Q9NQA5 729 aa16.32■□□□□ 0.2
CTDP1-201ENST00000075430 IMPAD1Q9NX62 359 aa16.32■□□□□ 0.2
CTDP1-201ENST00000075430 UBA2Q9UBT2 640 aaPredicted RBP16.32■□□□□ 0.2
CTDP1-201ENST00000075430 MALT1Q9UDY8 824 aa16.32■□□□□ 0.2
CTDP1-201ENST00000075430 RNF6Q9Y252 685 aa16.32■□□□□ 0.2
CTDP1-201ENST00000075430 B3GNT3Q9Y2A9 372 aa16.32■□□□□ 0.2
CTDP1-201ENST00000075430 ZFP37Q9Y6Q3 630 aaPredicted RBP16.32■□□□□ 0.2
CTDP1-201ENST00000075430 PARP14Q460N5 1801 aa16.32■□□□□ 0.2
CTDP1-201ENST00000075430 MTX2O75431 263 aa16.32■□□□□ 0.2
CTDP1-201ENST00000075430 ARMC4Q5T2S8 1044 aa16.32■□□□□ 0.2
CTDP1-201ENST00000075430 NXNL2Q5VZ03 156 aa16.32■□□□□ 0.2
CTDP1-201ENST00000075430 TMEM203Q969S6 136 aa16.32■□□□□ 0.2
CTDP1-201ENST00000075430 IL4I1Q96RQ9 567 aa16.32■□□□□ 0.2
CTDP1-201ENST00000075430 SLIRPQ9GZT3 109 aaKnown RBP16.32■□□□□ 0.2
CTDP1-201ENST00000075430 ABCB9Q9NP78 766 aa16.32■□□□□ 0.2
CTDP1-201ENST00000075430 ARL15Q9NXU5 204 aa16.32■□□□□ 0.2
CTDP1-201ENST00000075430 FCF1Q9Y324 198 aaKnown RBP16.32■□□□□ 0.2
CTDP1-201ENST00000075430 SIP14410 1827 aa16.32■□□□□ 0.2
CTDP1-201ENST00000075430 SBF1O95248 1867 aa16.32■□□□□ 0.2
CTDP1-201ENST00000075430 F5H5T6 163 aa16.32■□□□□ 0.2
CTDP1-201ENST00000075430 UPK1BO75841 260 aa16.32■□□□□ 0.2
CTDP1-201ENST00000075430 OTCP00480 354 aa16.32■□□□□ 0.2
CTDP1-201ENST00000075430 CKMT1AP12532 417 aa16.32■□□□□ 0.2
CTDP1-201ENST00000075430 FLT3LGP49771 235 aa16.32■□□□□ 0.2
CTDP1-201ENST00000075430 OR2B6P58173 313 aa16.32■□□□□ 0.2
CTDP1-201ENST00000075430 TOP3AQ13472 1001 aaPredicted RBP16.32■□□□□ 0.2
CTDP1-201ENST00000075430 SERINC3Q13530 473 aa16.32■□□□□ 0.2
CTDP1-201ENST00000075430 GANABQ14697 944 aaKnown RBP16.32■□□□□ 0.2
CTDP1-201ENST00000075430 CPZQ66K79 652 aa16.32■□□□□ 0.2
CTDP1-201ENST00000075430 KLHL17Q6TDP4 642 aa16.32■□□□□ 0.2
CTDP1-201ENST00000075430 USP43Q70EL4 1123 aa16.32■□□□□ 0.2
CTDP1-201ENST00000075430 PARP16Q8N5Y8 322 aa16.32■□□□□ 0.2
CTDP1-201ENST00000075430 MMP28Q9H239 520 aa16.32■□□□□ 0.2
CTDP1-201ENST00000075430 SH3BP4Q9P0V3 963 aa16.32■□□□□ 0.2
CTDP1-201ENST00000075430 ZNF639Q9UID6 485 aa16.32■□□□□ 0.2
CTDP1-201ENST00000075430 USP34Q70CQ2 3546 aa16.31■□□□□ 0.2
CTDP1-201ENST00000075430 APOL3O95236 402 aa16.31■□□□□ 0.2
CTDP1-201ENST00000075430 CD83Q01151 205 aa16.31■□□□□ 0.2
CTDP1-201ENST00000075430 BOP1Q14137 746 aaKnown RBP16.31■□□□□ 0.2
CTDP1-201ENST00000075430 GBX1Q14549 363 aa16.31■□□□□ 0.2
CTDP1-201ENST00000075430 MFSD14CQ5VZR4 134 aa16.31■□□□□ 0.2
CTDP1-201ENST00000075430 ITPKCQ96DU7 683 aa16.31■□□□□ 0.2
CTDP1-201ENST00000075430 HSH2DQ96JZ2 352 aa16.31■□□□□ 0.2
CTDP1-201ENST00000075430 CNPPD1Q9BV87 410 aa16.31■□□□□ 0.2
CTDP1-201ENST00000075430 THUMPD1Q9NXG2 353 aaKnown RBP16.31■□□□□ 0.2
CTDP1-201ENST00000075430 SLC6A14Q9UN76 642 aa16.31■□□□□ 0.2
CTDP1-201ENST00000075430 LOC285095A0A1B0GVY8 99 aa16.31■□□□□ 0.2
CTDP1-201ENST00000075430 ILVBLA1L0T0 632 aa16.31■□□□□ 0.2
CTDP1-201ENST00000075430 NOTOA8MTQ0 251 aa16.31■□□□□ 0.2
CTDP1-201ENST00000075430 IFRD1O00458 451 aaPredicted RBP16.31■□□□□ 0.2
CTDP1-201ENST00000075430 MED26O95402 600 aa16.31■□□□□ 0.2
CTDP1-201ENST00000075430 SSTR4P31391 388 aa16.31■□□□□ 0.2
CTDP1-201ENST00000075430 IFITM2Q01629 132 aa16.31■□□□□ 0.2
CTDP1-201ENST00000075430 KCNA10Q16322 511 aa16.31■□□□□ 0.2
CTDP1-201ENST00000075430 BCL7AQ4VC05 210 aa16.31■□□□□ 0.2
CTDP1-201ENST00000075430 TMEM132CQ8N3T6 1108 aa16.31■□□□□ 0.2
CTDP1-201ENST00000075430 PPP3R2Q96LZ3 170 aa16.31■□□□□ 0.2
CTDP1-201ENST00000075430 CDK5RAP1Q96SZ6 601 aaKnown RBP16.31■□□□□ 0.2
CTDP1-201ENST00000075430 DCAF13Q9NV06 445 aaKnown RBP16.31■□□□□ 0.2
CTDP1-201ENST00000075430 ELOVL2Q9NXB9 296 aa16.31■□□□□ 0.2
CTDP1-201ENST00000075430 PAQR5Q9NXK6 330 aaPredicted RBP16.31■□□□□ 0.2
CTDP1-201ENST00000075430 AGO1Q9UL18 857 aaKnown RBP16.31■□□□□ 0.2
CTDP1-201ENST00000075430 GABRQQ9UN88 632 aa16.31■□□□□ 0.2
CTDP1-201ENST00000075430 KPNA5O15131 536 aa16.31■□□□□ 0.2
CTDP1-201ENST00000075430 ACPPP15309 386 aa16.31■□□□□ 0.2
CTDP1-201ENST00000075430 ENGP17813 658 aa16.31■□□□□ 0.2
CTDP1-201ENST00000075430 EIF2DP41214 584 aaKnown RBP16.31■□□□□ 0.2
CTDP1-201ENST00000075430 RAB25P57735 213 aa16.31■□□□□ 0.2
CTDP1-201ENST00000075430 SLC35A2P78381 396 aa16.31■□□□□ 0.2
CTDP1-201ENST00000075430 USP39Q53GS9 565 aaKnown RBP16.31■□□□□ 0.2
CTDP1-201ENST00000075430 MANEALQ5VSG8 457 aa16.31■□□□□ 0.2
CTDP1-201ENST00000075430 ADGRG2Q8IZP9 1017 aa16.31■□□□□ 0.2
CTDP1-201ENST00000075430 UMODL1-AS1Q8N2C9 162 aa16.31■□□□□ 0.2
CTDP1-201ENST00000075430 SVOPLQ8N434 492 aa16.31■□□□□ 0.2
CTDP1-201ENST00000075430 SVOPQ8N4V2 548 aa16.31■□□□□ 0.2
CTDP1-201ENST00000075430 NUSAP1Q9BXS6 441 aaKnown RBP16.31■□□□□ 0.2
CTDP1-201ENST00000075430 RMND5AQ9H871 391 aa16.31■□□□□ 0.2
CTDP1-201ENST00000075430 BTBD3Q9Y2F9 522 aa16.31■□□□□ 0.2
CTDP1-201ENST00000075430 CA5AP35218 305 aa16.3■□□□□ 0.2
CTDP1-201ENST00000075430 BMPR1AP36894 532 aa16.3■□□□□ 0.2
CTDP1-201ENST00000075430 ARMCX4Q5H9R4 360 aa16.3■□□□□ 0.2
CTDP1-201ENST00000075430 ZNF300Q96RE9 604 aaPredicted RBP16.3■□□□□ 0.2
CTDP1-201ENST00000075430 C8orf4Q9NR00 106 aa16.3■□□□□ 0.2
CTDP1-201ENST00000075430 KLHL3Q9UH77 587 aa16.3■□□□□ 0.2
CTDP1-201ENST00000075430 CRLS1Q9UJA2 301 aa16.3■□□□□ 0.2
CTDP1-201ENST00000075430 PABPN1LA6NDY0 278 aaKnown RBP16.3■□□□□ 0.2
CTDP1-201ENST00000075430 TSPAN12O95859 305 aa16.3■□□□□ 0.2
CTDP1-201ENST00000075430 HOXD8P13378 290 aaPredicted RBP16.3■□□□□ 0.2
CTDP1-201ENST00000075430 WEE1P30291 646 aa16.3■□□□□ 0.2
CTDP1-201ENST00000075430 RRM2P31350 389 aa16.3■□□□□ 0.2
CTDP1-201ENST00000075430 FEN1P39748 380 aaKnown RBP16.3■□□□□ 0.2
CTDP1-201ENST00000075430 CTSKP43235 329 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms