RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 XKR8Q9H6D3 395 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 SUCOQ9UBS9 1254 aaKnown RBP11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 KCTD3Q9Y597 815 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 HS3ST4Q9Y661 456 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 HAS3O00219 553 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 IFRD1O00458 451 aaPredicted RBP11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 PGRP06401 933 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 HOXA11P31270 313 aaPredicted RBP11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 MAPKAPK2P49137 400 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 MTPNP58546 118 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 NIPAL4Q0D2K0 466 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 STX4Q12846 297 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 PACRGLQ8N7B6 248 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 SIDT2Q8NBJ9 832 aaKnown RBP11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 CRELD1Q96HD1 420 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 SLC6A15Q9H2J7 730 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 TFB2MQ9H5Q4 396 aaKnown RBP11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 TLR6Q9Y2C9 796 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 BOLA1Q9Y3E2 137 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 PCDHB1Q9Y5F3 818 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 MGAMO43451 1857 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 UGT2B11O75310 529 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 STX11O75558 287 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 PTPN5P54829 565 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 RPS24P62847 133 aaKnown RBP11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 GK3PQ14409 553 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 USP41Q3LFD5 358 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 SIRPB2Q5JXA9 342 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 SMYD5Q6GMV2 418 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 NUDT18Q6ZVK8 323 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 HJURPQ8NCD3 748 aaPredicted RBP11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 STON2Q8WXE9 905 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 ITCHQ96J02 903 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 MUS81Q96NY9 551 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 CYP2S1Q96SQ9 504 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 CPNE5Q9HCH3 593 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 THG1LQ9NWX6 298 aaKnown RBP11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 PTGFRNQ9P2B2 879 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 COMMD3Q9UBI1 195 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 ZFP37Q9Y6Q3 630 aaPredicted RBP11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 FADS2P1A8MWK0 482 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 PRAMEF1O95521 474 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 SLC35E2BP0CK96 405 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 CTSKP43235 329 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 ZNF33AQ06730 810 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 TIGD6Q17RP2 521 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 FAM180AQ6UWF9 173 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 TMEM199Q8N511 208 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 GPR156Q8NFN8 814 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 GIMAP2Q9UG22 337 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 EVLQ9UI08 416 aaPredicted RBP11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 MKLN1Q9UL63 735 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 BHMG1C9JSJ3 638 aaPredicted RBP11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 NIPSNAP2O75323 286 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 ALDH1A2O94788 518 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 INMTO95050 263 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 ATE1O95260 518 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 CKBP12277 381 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 MYL9P24844 172 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 ALDH3A2P51648 485 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 CEACAM7Q14002 265 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 XKR6Q5GH73 641 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 RBM48Q5RL73 367 aaKnown RBP11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 PXDC1Q5TGL8 231 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 RFPL4BQ6ZWI9 263 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 CYP4Z1Q86W10 505 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 KLHDC9Q8NEP7 349 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 S100PBPQ96BU1 408 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 FUBP3Q96I24 572 aaKnown RBP eCLIP11.86□□□□□ -0.513e-7■■■□□ 15.6
TSPAN9-201ENST00000011898 FEM1CQ96JP0 617 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 UCK2Q9BZX2 261 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 ZNF304Q9HCX3 659 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 AHSPQ9NZD4 102 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 ANKMY1Q9P2S6 941 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 CFL2Q9Y281 166 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 CASP8AP2Q9UKL3 1982 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 LRRC37A2A6NM11 1700 aa11.86□□□□□ -0.51
TSPAN9-201ENST00000011898 A0A1B0GVM2 712 aa11.85□□□□□ -0.51
TSPAN9-201ENST00000011898 TCAF2A6NFQ2 919 aa11.85□□□□□ -0.51
TSPAN9-201ENST00000011898 PLK4O00444 970 aa11.85□□□□□ -0.51
TSPAN9-201ENST00000011898 SORBS2O94875 1100 aaKnown RBP11.85□□□□□ -0.51
TSPAN9-201ENST00000011898 ESR1P03372 595 aa11.85□□□□□ -0.51
TSPAN9-201ENST00000011898 NR2F6P10588 404 aa11.85□□□□□ -0.51
TSPAN9-201ENST00000011898 E2F2Q14209 437 aa11.85□□□□□ -0.51
TSPAN9-201ENST00000011898 ACOX1Q15067 660 aa11.85□□□□□ -0.51
TSPAN9-201ENST00000011898 NDUFAF6Q330K2 333 aa11.85□□□□□ -0.51
TSPAN9-201ENST00000011898 FAM174BQ3ZCQ3 159 aa11.85□□□□□ -0.51
TSPAN9-201ENST00000011898 TRAPPC5Q8IUR0 188 aa11.85□□□□□ -0.51
TSPAN9-201ENST00000011898 MAPK15Q8TD08 544 aa11.85□□□□□ -0.51
TSPAN9-201ENST00000011898 MYO19Q96H55 970 aa11.85□□□□□ -0.51
TSPAN9-201ENST00000011898 CDK15Q96Q40 435 aa11.85□□□□□ -0.51
TSPAN9-201ENST00000011898 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.85□□□□□ -0.51
TSPAN9-201ENST00000011898 ZBTB42B2RXF5 422 aa11.85□□□□□ -0.51
TSPAN9-201ENST00000011898 SDHDO14521 159 aa11.85□□□□□ -0.51
TSPAN9-201ENST00000011898 AQP1P29972 269 aa11.85□□□□□ -0.51
TSPAN9-201ENST00000011898 PPP5CP53041 499 aa11.85□□□□□ -0.51
TSPAN9-201ENST00000011898 NAPRTQ6XQN6 538 aa11.85□□□□□ -0.51
TSPAN9-201ENST00000011898 UBE2R2Q712K3 238 aaPredicted RBP11.85□□□□□ -0.51
TSPAN9-201ENST00000011898 ADGRD2Q7Z7M1 963 aa11.85□□□□□ -0.51
TSPAN9-201ENST00000011898 KIF18BQ86Y91 864 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms