RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Cxxc1Q9CWW7 660 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Marveld3Q9D956 376 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Ndufs3Q9DCT2 263 aaKnown RBP9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Pkmyt1Q9ESG9 490 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Gm21885A0A286YDN8 145 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Vmn2r12L7N217 831 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Rundc3aO08576 446 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Cpa6Q5U901 438 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Lcp2Q60787 533 aaKnown RBP9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Ptx4Q6RUU0 478 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 AptxQ7TQC5 342 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Piwil4Q8CGT6 848 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Pkn3Q8K045 878 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Dcun1d3Q8K0V2 304 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Plbd1Q8VCI0 550 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Q91W34 466 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Lrrc4Q99PH1 652 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Txndc12Q9CQU0 170 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Moxd1Q9CXI3 613 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Rgs3Q9DC04 966 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Rnft1Q9DCN7 395 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Tlr4Q9QUK6 835 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Rnf11Q9QYK7 154 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Gm15821A6X8J8 139 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Klhl3E0CZ16 587 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Spata31d1cE9QAF1 853 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 1700122O11RikJ3QPW6 241 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Pld3O35405 488 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Dnajb5O89114 348 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 NelfeP19426 375 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Bmp2P21274 394 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Hnf4aP49698 474 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Mxd1P50538 227 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Gpc4P51655 557 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Tbpl1P62340 186 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Bahd1Q497V6 772 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Dnajc11Q5U458 559 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Olfr12Q60894 333 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Zc3h11aQ6NZF1 792 aaKnown RBP9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Olfr293Q7TS10 336 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 C1qtnf7Q8BVD7 289 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Bpifb2Q8C1E1 462 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Actr8Q8R2S9 624 aaKnown RBP9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 LsrQ99KG5 594 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Bud23Q9CY21 281 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Gtf2h2Q9JIB4 396 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Rabgef1Q9JM13 491 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 H2afyQ9QZQ8 372 aaKnown RBP9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Tmem196V9GX04 182 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Serpinb6cW4VSP4 379 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Zfc3h1B2RT41 1992 aaKnown RBP9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Prune2Q52KR3 3084 aa9.64□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Vmn1r2A2AMT6 306 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Kcnk1O08581 336 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Azin1O35484 448 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Surf2P09926 257 aaKnown RBP9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Sar1aP36536 198 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Serpind1P49182 478 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Gal3st3P61315 431 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Tmem65Q4VAE3 234 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Vdac3Q60931 283 aaKnown RBP9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Magee1Q6PCZ4 918 aaKnown RBP9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Eme1Q8BJW7 570 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Q8C3I9 435 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Ptbp2Q91Z31 531 aaKnown RBP9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Agpat5Q9D1E8 365 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Trim42Q9D2H5 723 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Trpv4Q9EPK8 871 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Adrm1Q9JKV1 407 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Mrpl40Q9Z2Q5 206 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Igkv6-20A0A140T8P2 115 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Zscan4eA0A1B0GRE8 505 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Znf711A2ANX9 761 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Zbed6D2EAC2 980 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 E2f3O35261 457 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Slc32a1O35633 525 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 EdaO54693 391 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 SnnP61807 88 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Arid5aQ3U108 590 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Itih1Q61702 907 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Sox11Q7M6Y2 395 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 ChfrQ810L3 664 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Ubap1Q8BH48 502 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Clip4Q8CI96 704 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Grhl2Q8K5C0 625 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Kdelr3Q8R1L4 214 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Vmn1r33Q8R2E0 305 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Uts2rQ8VIH9 385 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Pcdhb10Q91VE5 797 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Cyc1Q9D0M3 325 aaKnown RBP9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Ebag9Q9D0V7 213 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Hhipl2Q9D2G9 717 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 5330417H12RikQ9D3P2 110 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Tmigd1Q9D7L8 261 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Ift43Q9DA69 206 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Olfr630Q9EQQ7 319 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Dyrk1bQ9Z188 629 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Plxna2P70207 1894 aa9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 MgaA2AWL7 3003 aaKnown RBP9.63□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Cyp4a32A2A8T1 509 aa9.63□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms