RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 CROTQ9UKG9 612 aa15.96■□□□□ 0.15
PHGDH-216ENST00000641375 PCDHGA7Q9Y5G6 932 aa15.96■□□□□ 0.15
PHGDH-216ENST00000641375 PCYT1BQ9Y5K3 369 aaPredicted RBP15.96■□□□□ 0.15
PHGDH-216ENST00000641375 A0A1W2PP18 115 aa15.96■□□□□ 0.14
PHGDH-216ENST00000641375 FAM234BA2RU67 622 aa15.96■□□□□ 0.14
PHGDH-216ENST00000641375 RSL1D1O76021 490 aaKnown RBP15.96■□□□□ 0.14
PHGDH-216ENST00000641375 PDYNP01213 254 aa15.96■□□□□ 0.14
PHGDH-216ENST00000641375 ASGR2P07307 311 aa15.96■□□□□ 0.14
PHGDH-216ENST00000641375 PCSK2P16519 638 aa15.96■□□□□ 0.14
PHGDH-216ENST00000641375 GNAZP19086 355 aa15.96■□□□□ 0.14
PHGDH-216ENST00000641375 CAPN3P20807 821 aa15.96■□□□□ 0.14
PHGDH-216ENST00000641375 HNF4AP41235 474 aa15.96■□□□□ 0.14
PHGDH-216ENST00000641375 POLR2JP52435 117 aaKnown RBP15.96■□□□□ 0.14
PHGDH-216ENST00000641375 UFM1P61960 85 aa15.96■□□□□ 0.14
PHGDH-216ENST00000641375 RPL38P63173 70 aaKnown RBP15.96■□□□□ 0.14
PHGDH-216ENST00000641375 XKR6Q5GH73 641 aa15.96■□□□□ 0.14
PHGDH-216ENST00000641375 FRG2Q64ET8 278 aa15.96■□□□□ 0.14
PHGDH-216ENST00000641375 CYP20A1Q6UW02 462 aa15.96■□□□□ 0.14
PHGDH-216ENST00000641375 SYTL1Q8IYJ3 562 aa15.96■□□□□ 0.14
PHGDH-216ENST00000641375 PROKR1Q8TCW9 393 aa15.96■□□□□ 0.14
PHGDH-216ENST00000641375 RAD51AP1Q96B01 352 aa15.96■□□□□ 0.14
PHGDH-216ENST00000641375 FRG2BQ96QU4 278 aa15.96■□□□□ 0.14
PHGDH-216ENST00000641375 C1orf109Q9NX04 203 aa15.96■□□□□ 0.14
PHGDH-216ENST00000641375 ASIC5Q9NY37 505 aa15.96■□□□□ 0.14
PHGDH-216ENST00000641375 BCAP29Q9UHQ4 241 aa15.96■□□□□ 0.14
PHGDH-216ENST00000641375 MMP17Q9ULZ9 603 aa15.96■□□□□ 0.14
PHGDH-216ENST00000641375 ASF1AQ9Y294 204 aa15.96■□□□□ 0.14
PHGDH-216ENST00000641375 L3MBTL1Q9Y468 752 aa15.96■□□□□ 0.14
PHGDH-216ENST00000641375 KCNE2Q9Y6J6 123 aa15.96■□□□□ 0.14
PHGDH-216ENST00000641375 H0Y3Z8 333 aa15.95■□□□□ 0.14
PHGDH-216ENST00000641375 IFRD1O00458 451 aaPredicted RBP15.95■□□□□ 0.14
PHGDH-216ENST00000641375 SEC22BO75396 215 aa15.95■□□□□ 0.14
PHGDH-216ENST00000641375 G6PDP11413 515 aa15.95■□□□□ 0.14
PHGDH-216ENST00000641375 ME2P23368 584 aa15.95■□□□□ 0.14
PHGDH-216ENST00000641375 PRPH2P23942 346 aa15.95■□□□□ 0.14
PHGDH-216ENST00000641375 HMGCS1Q01581 520 aa15.95■□□□□ 0.14
PHGDH-216ENST00000641375 ZNF423Q2M1K9 1284 aa15.95■□□□□ 0.14
PHGDH-216ENST00000641375 CACHD1Q5VU97 1274 aa15.95■□□□□ 0.14
PHGDH-216ENST00000641375 ZFAND4Q86XD8 727 aa15.95■□□□□ 0.14
PHGDH-216ENST00000641375 MTFMTQ96DP5 389 aaKnown RBP15.95■□□□□ 0.14
PHGDH-216ENST00000641375 HOPXQ9BPY8 73 aaPredicted RBP15.95■□□□□ 0.14
PHGDH-216ENST00000641375 GID8Q9NWU2 228 aa15.95■□□□□ 0.14
PHGDH-216ENST00000641375 NKX1-2Q9UD57 310 aaPredicted RBP15.95■□□□□ 0.14
PHGDH-216ENST00000641375 SLC23A2Q9UGH3 650 aa15.95■□□□□ 0.14
PHGDH-216ENST00000641375 ACSL5Q9ULC5 683 aa15.95■□□□□ 0.14
PHGDH-216ENST00000641375 POLR3HQ9Y535 204 aaPredicted RBP15.95■□□□□ 0.14
PHGDH-216ENST00000641375 CCDC154A6NI56 674 aa15.94■□□□□ 0.14
PHGDH-216ENST00000641375 NPIPB8E9PQR5 432 aa15.94■□□□□ 0.14
PHGDH-216ENST00000641375 NARSO43776 548 aaKnown RBP15.94■□□□□ 0.14
PHGDH-216ENST00000641375 KCNJ13O60928 360 aa15.94■□□□□ 0.14
PHGDH-216ENST00000641375 FKBP6O75344 327 aa15.94■□□□□ 0.14
PHGDH-216ENST00000641375 ANP32DO95626 131 aa15.94■□□□□ 0.14
PHGDH-216ENST00000641375 IGFALSP35858 605 aa15.94■□□□□ 0.14
PHGDH-216ENST00000641375 PEX19P40855 299 aa15.94■□□□□ 0.14
PHGDH-216ENST00000641375 DPP6P42658 865 aa15.94■□□□□ 0.14
PHGDH-216ENST00000641375 DMPKQ09013 629 aa15.94■□□□□ 0.14
PHGDH-216ENST00000641375 RCN1Q15293 331 aa15.94■□□□□ 0.14
PHGDH-216ENST00000641375 SKIV2LQ15477 1246 aaKnown RBP15.94■□□□□ 0.14
PHGDH-216ENST00000641375 SLC44A4Q53GD3 710 aa15.94■□□□□ 0.14
PHGDH-216ENST00000641375 IER5LQ5T953 404 aa15.94■□□□□ 0.14
PHGDH-216ENST00000641375 KIAA1324Q6UXG2 1013 aaKnown RBP15.94■□□□□ 0.14
PHGDH-216ENST00000641375 DCUN1D3Q8IWE4 304 aa15.94■□□□□ 0.14
PHGDH-216ENST00000641375 DRAXINQ8NBI3 349 aaPredicted RBP15.94■□□□□ 0.14
PHGDH-216ENST00000641375 PPFIBP2Q8ND30 876 aa15.94■□□□□ 0.14
PHGDH-216ENST00000641375 TFGQ92734 400 aaPredicted RBP15.94■□□□□ 0.14
PHGDH-216ENST00000641375 TEX37Q96LM6 180 aa15.94■□□□□ 0.14
PHGDH-216ENST00000641375 OR4K3Q96R72 315 aa15.94■□□□□ 0.14
PHGDH-216ENST00000641375 ACPTQ9BZG2 426 aa15.94■□□□□ 0.14
PHGDH-216ENST00000641375 SLC52A3Q9NQ40 469 aa15.94■□□□□ 0.14
PHGDH-216ENST00000641375 SLC2A4RGQ9NR83 387 aa15.94■□□□□ 0.14
PHGDH-216ENST00000641375 ADA2Q9NZK5 511 aa15.94■□□□□ 0.14
PHGDH-216ENST00000641375 CIDEBQ9UHD4 219 aa15.94■□□□□ 0.14
PHGDH-216ENST00000641375 SLC17A4Q9Y2C5 497 aa15.94■□□□□ 0.14
PHGDH-216ENST00000641375 TRIOBPQ9H2D6 2365 aa15.94■□□□□ 0.14
PHGDH-216ENST00000641375 E7EQ34 232 aa15.94■□□□□ 0.14
PHGDH-216ENST00000641375 CACNB4O00305 520 aaPredicted RBP15.94■□□□□ 0.14
PHGDH-216ENST00000641375 PRAMEF4O60810 478 aa15.94■□□□□ 0.14
PHGDH-216ENST00000641375 KRT36O76013 467 aa15.94■□□□□ 0.14
PHGDH-216ENST00000641375 SORBS2O94875 1100 aaKnown RBP15.94■□□□□ 0.14
PHGDH-216ENST00000641375 SRFP11831 508 aa15.94■□□□□ 0.14
PHGDH-216ENST00000641375 NDUFV2P19404 249 aa15.94■□□□□ 0.14
PHGDH-216ENST00000641375 KELP23276 732 aa15.94■□□□□ 0.14
PHGDH-216ENST00000641375 JAK1P23458 1154 aa15.94■□□□□ 0.14
PHGDH-216ENST00000641375 MAT2AP31153 395 aaKnown RBP15.94■□□□□ 0.14
PHGDH-216ENST00000641375 THOP1P52888 689 aa15.94■□□□□ 0.14
PHGDH-216ENST00000641375 TBPL1P62380 186 aa15.94■□□□□ 0.14
PHGDH-216ENST00000641375 AP2B1P63010 937 aa15.94■□□□□ 0.14
PHGDH-216ENST00000641375 PRAMEF9Q5VWM5 478 aa15.94■□□□□ 0.14
PHGDH-216ENST00000641375 GRHL2Q6ISB3 625 aa15.94■□□□□ 0.14
PHGDH-216ENST00000641375 C8orf82Q6P1X6 216 aaPredicted RBP15.94■□□□□ 0.14
PHGDH-216ENST00000641375 PRMT9Q6P2P2 845 aa15.94■□□□□ 0.14
PHGDH-216ENST00000641375 AAGABQ6PD74 315 aa15.94■□□□□ 0.14
PHGDH-216ENST00000641375 TMEM92Q6UXU6 159 aa15.94■□□□□ 0.14
PHGDH-216ENST00000641375 FAM124AQ86V42 546 aa15.94■□□□□ 0.14
PHGDH-216ENST00000641375 RETREG3Q86VR2 466 aa15.94■□□□□ 0.14
PHGDH-216ENST00000641375 GALNT13Q8IUC8 556 aa15.94■□□□□ 0.14
PHGDH-216ENST00000641375 FAM9CQ8IZT9 166 aa15.94■□□□□ 0.14
PHGDH-216ENST00000641375 EFCAB3Q8N7B9 438 aa15.94■□□□□ 0.14
PHGDH-216ENST00000641375 UHRF1Q96T88 793 aaPredicted RBP15.94■□□□□ 0.14
PHGDH-216ENST00000641375 TIMM29Q9BSF4 260 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms