RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 PSME2Q9UL46 239 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 RIMKLBQ9ULI2 386 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 FAM240BA0A1B0GVZ2 78 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 PLK4O00444 970 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 WNT9AO14904 365 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 MYL12BO14950 172 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 INPP4BO15327 924 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 AP2A1O95782 977 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 OR56A5P0C7T3 313 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 SRCP12931 536 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 VIPR1P32241 457 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 SDC2P34741 201 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 TTPAP49638 278 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 DUSP3P51452 185 aaPredicted RBP5.55□□□□□ -1.52
RTTN-218ENST00000640408 PKNOX1P55347 436 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 SEC13P55735 322 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 BNIP3Q12983 259 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 BTBD16Q32M84 506 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 AGKQ53H12 422 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 CLVS2Q5SYC1 327 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 MANEALQ5VSG8 457 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 DUPD1Q68J44 220 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 NCBP2-AS2Q69YL0 99 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 CYP2R1Q6VVX0 501 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 Q6ZVU0 165 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 ZBTB46Q86UZ6 589 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 PYROXD2Q8N2H3 581 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 FAM109AQ8N4B1 249 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 ANKRD53Q8N9V6 530 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 ZNF540Q8NDQ6 660 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 RBM15BQ8NDT2 890 aaKnown RBP5.55□□□□□ -1.52
RTTN-218ENST00000640408 SLCO2A1Q92959 643 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 ZSWIM3Q96MP5 696 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 LGMNQ99538 433 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 OSER1Q9NX31 292 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 ADPRHL2Q9NX46 363 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 FBXO10Q9UK96 956 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 VAPBO95292 243 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 MZF1P28698 734 aaPredicted RBP5.55□□□□□ -1.52
RTTN-218ENST00000640408 CD79BP40259 229 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 DHPSP49366 369 aaPredicted RBP5.55□□□□□ -1.52
RTTN-218ENST00000640408 PSME3P61289 254 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 CRY1Q16526 586 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 FXNQ16595 210 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 SPRED2Q7Z698 418 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 ATG16L2Q8NAA4 619 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 RPL10LQ96L21 214 aaKnown RBP5.55□□□□□ -1.52
RTTN-218ENST00000640408 MCCC1Q96RQ3 725 aaPredicted RBP5.55□□□□□ -1.52
RTTN-218ENST00000640408 COPS8Q99627 209 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 APOL2Q9BQE5 337 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 TMEM121Q9BTD3 319 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 PRRG3Q9BZD7 231 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 ZDHHC5Q9C0B5 715 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 MUC13Q9H3R2 512 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 SSU72Q9NP77 194 aaKnown RBP5.55□□□□□ -1.52
RTTN-218ENST00000640408 PCDHB16Q9NRJ7 776 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 CCL26Q9Y258 94 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 MAB21L2Q9Y586 359 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 CUL9Q8IWT3 2517 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 RCCD1A6NED2 376 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 IFRD1O00458 451 aaPredicted RBP5.55□□□□□ -1.52
RTTN-218ENST00000640408 DDX3YO15523 660 aaKnown RBP5.55□□□□□ -1.52
RTTN-218ENST00000640408 UGT2B11O75310 529 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 VPS4BO75351 444 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 VPS26AO75436 327 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 SEMA4FO95754 770 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 HIST1H2AGP0C0S8 130 aaPredicted RBP5.55□□□□□ -1.52
RTTN-218ENST00000640408 BMP1P13497 986 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 HIST1H2ADP20671 130 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 HLA-FP30511 346 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 CAPGP40121 348 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 RPL35P42766 123 aaKnown RBP5.55□□□□□ -1.52
RTTN-218ENST00000640408 ATXN1P54253 815 aaKnown RBP5.55□□□□□ -1.52
RTTN-218ENST00000640408 TFF2Q03403 129 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 LRP8Q14114 963 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 UBAP2LQ14157 1087 aaKnown RBP5.55□□□□□ -1.52
RTTN-218ENST00000640408 SEMA3AQ14563 771 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 CYP1B1Q16678 543 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 ARMC6Q6NXE6 501 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 CDC73Q6P1J9 531 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 CORO6Q6QEF8 472 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 DPY19L3Q6ZPD9 716 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 TMEM150AQ86TG1 271 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 ALYREFQ86V81 257 aaKnown RBP5.55□□□□□ -1.52
RTTN-218ENST00000640408 CAND1Q86VP6 1230 aaKnown RBP5.55□□□□□ -1.52
RTTN-218ENST00000640408 TRIM48Q8IWZ4 208 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 ETFBKMTQ8IXQ9 262 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 PACRGLQ8N7B6 248 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 ZNF669Q96BR6 464 aaPredicted RBP5.55□□□□□ -1.52
RTTN-218ENST00000640408 ISOC1Q96CN7 298 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 AP2M1Q96CW1 435 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 ELMO2Q96JJ3 720 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 HIST1H2AHQ96KK5 128 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 RNF145Q96MT1 663 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 ZNF347Q96SE7 839 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 HIST1H2AJQ99878 128 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 H2AFJQ9BTM1 129 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 RACGAP1Q9H0H5 632 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 NCKIPSDQ9NZQ3 722 aa5.55□□□□□ -1.52
RTTN-218ENST00000640408 SLCO3A1Q9UIG8 710 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms