RNA–Protein interactions for RNA: ENST00000640036.1

SCN1A-218, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,131 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-218ENST00000640036 OR14L1PQ8NHC6 308 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 CLHC1Q8NHS4 586 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 HS6ST2Q96MM7 605 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 ZBP1Q9H171 429 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 IL1RL2Q9HB29 575 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 RXFP1Q9HBX9 757 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 MOCS1Q9NZB8 636 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 NID2Q14112 1375 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 NUP205Q92621 2012 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 FAM155AB1AL88 458 aaPredicted RBP4.91□□□□□ -1.62
SCN1A-218ENST00000640036 ARHGAP33O14559 1287 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 ZNF185O15231 689 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 ZNF682O95780 498 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 CST3P01034 146 aaPredicted RBP4.91□□□□□ -1.62
SCN1A-218ENST00000640036 SPATA31C1P0DKV0 1188 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 ADRB3P13945 408 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 FAUP35544 74 aaKnown RBP4.91□□□□□ -1.62
SCN1A-218ENST00000640036 DLSTP36957 453 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 TAF1AQ15573 450 aaPredicted RBP4.91□□□□□ -1.62
SCN1A-218ENST00000640036 NTRK3Q16288 839 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 GPR153Q6NV75 609 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 FBXL22Q6P050 247 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 CLEC20AQ6ZU45 233 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 WDR53Q7Z5U6 358 aaPredicted RBP4.91□□□□□ -1.62
SCN1A-218ENST00000640036 PTCD2Q8WV60 388 aaKnown RBP4.91□□□□□ -1.62
SCN1A-218ENST00000640036 PLEKHA1Q9HB21 404 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 MTMR10Q9NXD2 777 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 TMPRSS11EQ9UL52 423 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 NOVA2Q9UNW9 492 aaKnown RBP4.91□□□□□ -1.62
SCN1A-218ENST00000640036 NHSQ6T4R5 1651 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 RGPD2P0DJD1 1756 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 POLEQ07864 2286 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 DUXAA6NLW8 204 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 NPIPA2E9PIF3 369 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 NPIPA3F8WFD2 350 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 ALOX15BO15296 676 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 STK16O75716 305 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 ACPPP15309 386 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 ZNF823P16415 610 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 CCNOP22674 350 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 RBL1P28749 1068 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 FEN1P39748 380 aaKnown RBP4.9□□□□□ -1.62
SCN1A-218ENST00000640036 KCNJ1P48048 391 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 SRYQ05066 204 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 NAB1Q13506 487 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 EIF2S3LQ2VIR3 472 aaKnown RBP4.9□□□□□ -1.62
SCN1A-218ENST00000640036 BTLAQ7Z6A9 289 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 CA5BP1Q8WTZ4 195 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 GAB3Q8WWW8 586 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 DIO2Q92813 273 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 HPS1Q92902 700 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 DPEP3Q9H4B8 488 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 DCTN4Q9UJW0 460 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 BAIAP2Q9UQB8 552 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 ENTPD2Q9Y5L3 495 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 FIGNL2A6NMB9 653 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 FSCN2O14926 492 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 KLRC4O43908 158 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 SEC31AO94979 1220 aaKnown RBP4.9□□□□□ -1.62
SCN1A-218ENST00000640036 SERPINA3P01011 423 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 COX6B1P14854 86 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 ITPKAP23677 461 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 CHRNB3Q05901 458 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 IL10RAQ13651 578 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 HKDC1Q2TB90 917 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 PDCD4Q53EL6 469 aaKnown RBP4.9□□□□□ -1.62
SCN1A-218ENST00000640036 SPANXN2Q5MJ10 180 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 FAM69BQ5VUD6 431 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 C6orf15Q6UXA7 325 aaPredicted RBP4.9□□□□□ -1.62
SCN1A-218ENST00000640036 GRAMD2AQ8IUY3 354 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 KATNAL2Q8IYT4 538 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 CRYBG2Q8N1P7 616 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 OR52K1Q8NGK4 314 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 FIBINQ8TAL6 211 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 ELMO3Q96BJ8 720 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 ZBED6CLQ96FA7 236 aaPredicted RBP4.9□□□□□ -1.62
SCN1A-218ENST00000640036 GPER1Q99527 375 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 EPYCQ99645 322 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 APOOQ9BUR5 198 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 ST6GALNAC4Q9H4F1 302 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 ADAP2Q9NPF8 381 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 DNMT3BQ9UBC3 853 aaKnown RBP4.9□□□□□ -1.62
SCN1A-218ENST00000640036 ZFP69BQ9UJL9 534 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 CAMK2AQ9UQM7 478 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 BTBD3Q9Y2F9 522 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 A0A1W2PRG6 482 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 TTC34A8MYJ7 566 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 PRR33A8MZF0 331 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 TNFSF14O43557 240 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 CNOT3O75175 753 aaKnown RBP4.9□□□□□ -1.62
SCN1A-218ENST00000640036 GPR32O75388 356 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 CSO75390 466 aaKnown RBP4.9□□□□□ -1.62
SCN1A-218ENST00000640036 PSIP1O75475 530 aaKnown RBP4.9□□□□□ -1.62
SCN1A-218ENST00000640036 GATBO75879 557 aaKnown RBP4.9□□□□□ -1.62
SCN1A-218ENST00000640036 SASH3O75995 380 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 GP1BBP13224 206 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 ARL3P36405 182 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 DNASE1L1P49184 302 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 PUDPQ08623 228 aa4.9□□□□□ -1.62
SCN1A-218ENST00000640036 CRYMQ14894 314 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms