RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-231	ENST00000639599	IL17F	Q96PD4	163 aa		14.1	□□□□□ -0.15
TARDBP-231	ENST00000639599	DESI2	Q9BSY9	194 aa		14.1	□□□□□ -0.15
TARDBP-231	ENST00000639599	SOX17	Q9H6I2	414 aa	Predicted RBP	14.1	□□□□□ -0.15
TARDBP-231	ENST00000639599	ZNF552	Q9H707	407 aa	Predicted RBP	14.1	□□□□□ -0.15
TARDBP-231	ENST00000639599	WDR54	Q9H977	334 aa		14.1	□□□□□ -0.15
TARDBP-231	ENST00000639599	TTC7A	Q9ULT0	858 aa	Predicted RBP	14.1	□□□□□ -0.15
TARDBP-231	ENST00000639599	TCRBV7S2A1N4T	A0A589	114 aa		14.09	□□□□□ -0.15
TARDBP-231	ENST00000639599	CTSB	P07858	339 aa		14.09	□□□□□ -0.15
TARDBP-231	ENST00000639599	UMOD	P07911	640 aa		14.09	□□□□□ -0.15
TARDBP-231	ENST00000639599	PSMA3	P25788	255 aa		14.09	□□□□□ -0.15
TARDBP-231	ENST00000639599	CCNF	P41002	786 aa		14.09	□□□□□ -0.15
TARDBP-231	ENST00000639599	GRIA3	P42263	894 aa		14.09	□□□□□ -0.15
TARDBP-231	ENST00000639599	CARS	P49589	748 aa	Known RBP	14.09	□□□□□ -0.15
TARDBP-231	ENST00000639599	BASP1	P80723	227 aa	Known RBP	14.09	□□□□□ -0.15
TARDBP-231	ENST00000639599	PCID2	Q5JVF3	399 aa		14.09	□□□□□ -0.15
TARDBP-231	ENST00000639599	SHISA6	Q6ZSJ9	500 aa		14.09	□□□□□ -0.15
TARDBP-231	ENST00000639599	OVCH1	Q7RTY7	1134 aa		14.09	□□□□□ -0.15
TARDBP-231	ENST00000639599	LRRC6	Q86X45	466 aa		14.09	□□□□□ -0.15
TARDBP-231	ENST00000639599	KRT222	Q8N1A0	295 aa		14.09	□□□□□ -0.15
TARDBP-231	ENST00000639599	METTL27	Q8N6F8	245 aa	Predicted RBP	14.09	□□□□□ -0.15
TARDBP-231	ENST00000639599	FLVCR1-AS1	Q8TAF5	88 aa		14.09	□□□□□ -0.15
TARDBP-231	ENST00000639599	DNAJB14	Q8TBM8	379 aa		14.09	□□□□□ -0.15
TARDBP-231	ENST00000639599	C1orf54	Q8WWF1	131 aa		14.09	□□□□□ -0.15
TARDBP-231	ENST00000639599	SLC6A20	Q9NP91	592 aa		14.09	□□□□□ -0.15
TARDBP-231	ENST00000639599	SEMA3G	Q9NS98	782 aa		14.09	□□□□□ -0.15
TARDBP-231	ENST00000639599	BFAR	Q9NZS9	450 aa		14.09	□□□□□ -0.15
TARDBP-231	ENST00000639599	PTPN13	Q12923	2485 aa		14.09	□□□□□ -0.15
TARDBP-231	ENST00000639599		H3BMH7	237 aa		14.08	□□□□□ -0.16
TARDBP-231	ENST00000639599	MAP2K7	O14733	419 aa		14.08	□□□□□ -0.16
TARDBP-231	ENST00000639599	CD3EAP	O15446	510 aa	Known RBP	14.08	□□□□□ -0.16
TARDBP-231	ENST00000639599	EIF2S1	P05198	315 aa	Known RBP	14.08	□□□□□ -0.16
TARDBP-231	ENST00000639599	TPBGL	P0DKB5	382 aa		14.08	□□□□□ -0.16
TARDBP-231	ENST00000639599	BDKRB1	P46663	353 aa		14.08	□□□□□ -0.16
TARDBP-231	ENST00000639599	EIF3B	P55884	814 aa	Known RBP	14.08	□□□□□ -0.16
TARDBP-231	ENST00000639599	PER3	P56645	1201 aa		14.08	□□□□□ -0.16
TARDBP-231	ENST00000639599	FOXL2	P58012	376 aa		14.08	□□□□□ -0.16
TARDBP-231	ENST00000639599	VSX2	P58304	361 aa	Predicted RBP	14.08	□□□□□ -0.16
TARDBP-231	ENST00000639599	CDC16	Q13042	620 aa		14.08	□□□□□ -0.16
TARDBP-231	ENST00000639599	TSTA3	Q13630	321 aa	Predicted RBP	14.08	□□□□□ -0.16
TARDBP-231	ENST00000639599	CNST	Q6PJW8	725 aa		14.08	□□□□□ -0.16
TARDBP-231	ENST00000639599	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	14.08	□□□□□ -0.16
TARDBP-231	ENST00000639599	LDB1	Q86U70	411 aa	Predicted RBP	14.08	□□□□□ -0.16
TARDBP-231	ENST00000639599	VRK3	Q8IV63	474 aa		14.08	□□□□□ -0.16
TARDBP-231	ENST00000639599	PARP9	Q8IXQ6	854 aa		14.08	□□□□□ -0.16
TARDBP-231	ENST00000639599	MPP5	Q8N3R9	675 aa		14.08	□□□□□ -0.16
TARDBP-231	ENST00000639599	RNF10	Q8N5U6	811 aa	Known RBP	14.08	□□□□□ -0.16
TARDBP-231	ENST00000639599	LINC01555	Q8NAE3	123 aa		14.08	□□□□□ -0.16
TARDBP-231	ENST00000639599	PPP4R1	Q8TF05	950 aa		14.08	□□□□□ -0.16
TARDBP-231	ENST00000639599	UBE2Q2	Q8WVN8	375 aa		14.08	□□□□□ -0.16
TARDBP-231	ENST00000639599	ZUFSP	Q96AP4	578 aa		14.08	□□□□□ -0.16
TARDBP-231	ENST00000639599	HES6	Q96HZ4	224 aa		14.08	□□□□□ -0.16
TARDBP-231	ENST00000639599	CRB3	Q9BUF7	120 aa		14.08	□□□□□ -0.16
TARDBP-231	ENST00000639599	YIPF2	Q9BWQ6	316 aa		14.08	□□□□□ -0.16
TARDBP-231	ENST00000639599	LHPP	Q9H008	270 aa		14.08	□□□□□ -0.16
TARDBP-231	ENST00000639599	TSR3	Q9UJK0	312 aa	Known RBP	14.08	□□□□□ -0.16
TARDBP-231	ENST00000639599	MAU2	Q9Y6X3	613 aa		14.08	□□□□□ -0.16
TARDBP-231	ENST00000639599	NBAS	A2RRP1	2371 aa		14.08	□□□□□ -0.16
TARDBP-231	ENST00000639599	MAST4	O15021	2626 aa		14.08	□□□□□ -0.16
TARDBP-231	ENST00000639599	TARM1	B6A8C7	271 aa		14.07	□□□□□ -0.16
TARDBP-231	ENST00000639599	MASP2	O00187	686 aa		14.07	□□□□□ -0.16
TARDBP-231	ENST00000639599	PRPF4	O43172	522 aa	Known RBP eCLIP	14.07	□□□□□ -0.16	2e-14	■■□□□ 12.4
TARDBP-231	ENST00000639599	SRPX2	O60687	465 aa	Predicted RBP	14.07	□□□□□ -0.16
TARDBP-231	ENST00000639599	CNOT3	O75175	753 aa	Known RBP	14.07	□□□□□ -0.16
TARDBP-231	ENST00000639599	ALOX12B	O75342	701 aa		14.07	□□□□□ -0.16
TARDBP-231	ENST00000639599	VPS26A	O75436	327 aa		14.07	□□□□□ -0.16
TARDBP-231	ENST00000639599	GPC4	O75487	556 aa		14.07	□□□□□ -0.16
TARDBP-231	ENST00000639599	MCM3	P25205	808 aa		14.07	□□□□□ -0.16
TARDBP-231	ENST00000639599	AOAH	P28039	575 aa		14.07	□□□□□ -0.16
TARDBP-231	ENST00000639599	CMPK1	P30085	196 aa		14.07	□□□□□ -0.16
TARDBP-231	ENST00000639599	GRIA1	P42261	906 aa		14.07	□□□□□ -0.16
TARDBP-231	ENST00000639599	OR1D4	P47884	311 aa		14.07	□□□□□ -0.16
TARDBP-231	ENST00000639599	SOX8	P57073	446 aa		14.07	□□□□□ -0.16
TARDBP-231	ENST00000639599	ACVR1	Q04771	509 aa		14.07	□□□□□ -0.16
TARDBP-231	ENST00000639599	OASL	Q15646	514 aa	Known RBP	14.07	□□□□□ -0.16
TARDBP-231	ENST00000639599	NKG7	Q16617	165 aa		14.07	□□□□□ -0.16
TARDBP-231	ENST00000639599	HIF1A	Q16665	826 aa		14.07	□□□□□ -0.16
TARDBP-231	ENST00000639599	RNF187	Q5TA31	235 aa	Predicted RBP	14.07	□□□□□ -0.16
TARDBP-231	ENST00000639599	MRNIP	Q6NTE8	343 aa		14.07	□□□□□ -0.16
TARDBP-231	ENST00000639599	FAM180A	Q6UWF9	173 aa		14.07	□□□□□ -0.16
TARDBP-231	ENST00000639599	C4orf22	Q6V702	233 aa		14.07	□□□□□ -0.16
TARDBP-231	ENST00000639599		Q6ZS92	163 aa		14.07	□□□□□ -0.16
TARDBP-231	ENST00000639599	ZNF534	Q76KX8	674 aa		14.07	□□□□□ -0.16
TARDBP-231	ENST00000639599	SLC13A5	Q86YT5	568 aa	Predicted RBP	14.07	□□□□□ -0.16
TARDBP-231	ENST00000639599	LURAP1L	Q8IV03	231 aa		14.07	□□□□□ -0.16
TARDBP-231	ENST00000639599	LKAAEAR1	Q8TD35	194 aa		14.07	□□□□□ -0.16
TARDBP-231	ENST00000639599	MIEF2	Q96C03	454 aa		14.07	□□□□□ -0.16
TARDBP-231	ENST00000639599	THOC3	Q96J01	351 aa	Known RBP	14.07	□□□□□ -0.16
TARDBP-231	ENST00000639599	CABS1	Q96KC9	395 aa		14.07	□□□□□ -0.16
TARDBP-231	ENST00000639599	ZNF778	Q96MU6	729 aa		14.07	□□□□□ -0.16
TARDBP-231	ENST00000639599	MIPEP	Q99797	713 aa		14.07	□□□□□ -0.16
TARDBP-231	ENST00000639599	IL22	Q9GZX6	179 aa		14.07	□□□□□ -0.16
TARDBP-231	ENST00000639599	ZNF304	Q9HCX3	659 aa		14.07	□□□□□ -0.16
TARDBP-231	ENST00000639599	UTP6	Q9NYH9	597 aa	Known RBP	14.07	□□□□□ -0.16
TARDBP-231	ENST00000639599	SPATA7	Q9P0W8	599 aa		14.07	□□□□□ -0.16
TARDBP-231	ENST00000639599	ZNF282	Q9UDV7	671 aa	Predicted RBP	14.07	□□□□□ -0.16
TARDBP-231	ENST00000639599	ERRFI1	Q9UJM3	462 aa	Predicted RBP	14.07	□□□□□ -0.16
TARDBP-231	ENST00000639599	GUCA1B	Q9UMX6	200 aa		14.07	□□□□□ -0.16
TARDBP-231	ENST00000639599	NOVA2	Q9UNW9	492 aa	Known RBP	14.07	□□□□□ -0.16
TARDBP-231	ENST00000639599	PCDHGA10	Q9Y5H3	936 aa		14.07	□□□□□ -0.16
TARDBP-231	ENST00000639599	CAPN6	Q9Y6Q1	641 aa		14.07	□□□□□ -0.16

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