RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.09□□□□□ -0.15
SCARB2-216ENST00000639300 ACVR1CQ8NER5 493 aa14.09□□□□□ -0.15
SCARB2-216ENST00000639300 CAPSLQ8WWF8 208 aa14.09□□□□□ -0.15
SCARB2-216ENST00000639300 KCNK13Q9HB14 408 aa14.09□□□□□ -0.15
SCARB2-216ENST00000639300 TDP1Q9NUW8 608 aa14.09□□□□□ -0.15
SCARB2-216ENST00000639300 MAP10Q9P2G4 905 aa14.09□□□□□ -0.15
SCARB2-216ENST00000639300 AHDC1Q5TGY3 1603 aaPredicted RBP14.09□□□□□ -0.15
SCARB2-216ENST00000639300 ZNF840PA6NDX5 716 aa14.08□□□□□ -0.15
SCARB2-216ENST00000639300 UPK3BL1B0FP48 263 aa14.08□□□□□ -0.15
SCARB2-216ENST00000639300 UPK3BL2E5RIL1 263 aa14.08□□□□□ -0.15
SCARB2-216ENST00000639300 LOC110117498-PIK3R3F6TDL0 507 aa14.08□□□□□ -0.15
SCARB2-216ENST00000639300 STX16O14662 325 aa14.08□□□□□ -0.15
SCARB2-216ENST00000639300 HTRA2O43464 458 aaPredicted RBP14.08□□□□□ -0.15
SCARB2-216ENST00000639300 APODP05090 189 aa14.08□□□□□ -0.15
SCARB2-216ENST00000639300 ACADVLP49748 655 aa14.08□□□□□ -0.15
SCARB2-216ENST00000639300 DSC3Q14574 896 aa14.08□□□□□ -0.15
SCARB2-216ENST00000639300 SMYD1Q8NB12 490 aa14.08□□□□□ -0.15
SCARB2-216ENST00000639300 TOP1MTQ969P6 601 aa14.08□□□□□ -0.15
SCARB2-216ENST00000639300 IGSF21Q96ID5 467 aa14.08□□□□□ -0.15
SCARB2-216ENST00000639300 ABCB9Q9NP78 766 aa14.08□□□□□ -0.15
SCARB2-216ENST00000639300 SLCO3A1Q9UIG8 710 aa14.08□□□□□ -0.15
SCARB2-216ENST00000639300 FZD4Q9ULV1 537 aa14.08□□□□□ -0.15
SCARB2-216ENST00000639300 GADD45GO95257 159 aa14.08□□□□□ -0.16
SCARB2-216ENST00000639300 FGF19O95750 216 aa14.08□□□□□ -0.16
SCARB2-216ENST00000639300 GTF2E2P29084 291 aaKnown RBP14.08□□□□□ -0.16
SCARB2-216ENST00000639300 GUCA1AP43080 201 aaPredicted RBP14.08□□□□□ -0.16
SCARB2-216ENST00000639300 MXD1Q05195 221 aa14.08□□□□□ -0.16
SCARB2-216ENST00000639300 TEAD4Q15561 434 aa14.08□□□□□ -0.16
SCARB2-216ENST00000639300 C2orf27AQ580R0 203 aa14.08□□□□□ -0.16
SCARB2-216ENST00000639300 GALNT13Q8IUC8 556 aa14.08□□□□□ -0.16
SCARB2-216ENST00000639300 FAR1Q8WVX9 515 aa14.08□□□□□ -0.16
SCARB2-216ENST00000639300 C12orf66Q96MD2 445 aa14.08□□□□□ -0.16
SCARB2-216ENST00000639300 TMEM175Q9BSA9 504 aa14.08□□□□□ -0.16
SCARB2-216ENST00000639300 DHRS4Q9BTZ2 278 aa14.08□□□□□ -0.16
SCARB2-216ENST00000639300 OR51B5Q9H339 312 aa14.08□□□□□ -0.16
SCARB2-216ENST00000639300 C11orf16Q9NQ32 467 aa14.08□□□□□ -0.16
SCARB2-216ENST00000639300 ZCCHC3Q9NUD5 404 aaKnown RBP14.08□□□□□ -0.16
SCARB2-216ENST00000639300 M0QX08 132 aa14.08□□□□□ -0.16
SCARB2-216ENST00000639300 STC2O76061 302 aa14.08□□□□□ -0.16
SCARB2-216ENST00000639300 STATHP02808 62 aa14.08□□□□□ -0.16
SCARB2-216ENST00000639300 TYRP14679 529 aa14.08□□□□□ -0.16
SCARB2-216ENST00000639300 FUT4P22083 530 aa14.08□□□□□ -0.16
SCARB2-216ENST00000639300 C1QTNF8P60827 252 aa14.08□□□□□ -0.16
SCARB2-216ENST00000639300 OR4D1Q15615 310 aa14.08□□□□□ -0.16
SCARB2-216ENST00000639300 PYDC2Q56P42 97 aa14.08□□□□□ -0.16
SCARB2-216ENST00000639300 ANKRD26P1Q6NSI1 321 aa14.08□□□□□ -0.16
SCARB2-216ENST00000639300 AGTRAPQ6RW13 159 aa14.08□□□□□ -0.16
SCARB2-216ENST00000639300 VITQ6UXI7 678 aa14.08□□□□□ -0.16
SCARB2-216ENST00000639300 EZH1Q92800 747 aaPredicted RBP14.08□□□□□ -0.16
SCARB2-216ENST00000639300 OSBPL10Q9BXB5 764 aa14.08□□□□□ -0.16
SCARB2-216ENST00000639300 PRKAB1Q9Y478 270 aa14.08□□□□□ -0.16
SCARB2-216ENST00000639300 NDUFB5O43674 189 aa14.08□□□□□ -0.16
SCARB2-216ENST00000639300 DFNA5O60443 496 aa14.08□□□□□ -0.16
SCARB2-216ENST00000639300 CREG1O75629 220 aa14.08□□□□□ -0.16
SCARB2-216ENST00000639300 POP7O75817 140 aaKnown RBP14.08□□□□□ -0.16
SCARB2-216ENST00000639300 HLA-DQA2P01906 255 aa14.08□□□□□ -0.16
SCARB2-216ENST00000639300 IL7RP16871 459 aa14.08□□□□□ -0.16
SCARB2-216ENST00000639300 PSMA1P25786 263 aaKnown RBP14.08□□□□□ -0.16
SCARB2-216ENST00000639300 RPL10P27635 214 aaKnown RBP14.08□□□□□ -0.16
SCARB2-216ENST00000639300 ATP12AP54707 1039 aa14.08□□□□□ -0.16
SCARB2-216ENST00000639300 NFATC2Q13469 925 aa14.08□□□□□ -0.16
SCARB2-216ENST00000639300 C22orf39Q6P5X5 142 aa14.08□□□□□ -0.16
SCARB2-216ENST00000639300 MBOAT1Q6ZNC8 495 aa14.08□□□□□ -0.16
SCARB2-216ENST00000639300 ZCCHC10Q8TBK6 192 aa14.08□□□□□ -0.16
SCARB2-216ENST00000639300 TRIT1Q9H3H1 467 aaKnown RBP14.08□□□□□ -0.16
SCARB2-216ENST00000639300 SLC28A3Q9HAS3 691 aa14.08□□□□□ -0.16
SCARB2-216ENST00000639300 TRNAU1APQ9NX07 287 aaKnown RBP14.08□□□□□ -0.16
SCARB2-216ENST00000639300 CAPN15O75808 1086 aa14.07□□□□□ -0.16
SCARB2-216ENST00000639300 LAMP2P13473 410 aa14.07□□□□□ -0.16
SCARB2-216ENST00000639300 ACP5P13686 325 aa14.07□□□□□ -0.16
SCARB2-216ENST00000639300 BDKRB1P46663 353 aa14.07□□□□□ -0.16
SCARB2-216ENST00000639300 TLR1Q15399 786 aa14.07□□□□□ -0.16
SCARB2-216ENST00000639300 LCN9Q8WX39 176 aa14.07□□□□□ -0.16
SCARB2-216ENST00000639300 IL4I1Q96RQ9 567 aa14.07□□□□□ -0.16
SCARB2-216ENST00000639300 YIPF4Q9BSR8 244 aa14.07□□□□□ -0.16
SCARB2-216ENST00000639300 WDR12Q9GZL7 423 aaKnown RBP14.07□□□□□ -0.16
SCARB2-216ENST00000639300 RNF186Q9NXI6 227 aa14.07□□□□□ -0.16
SCARB2-216ENST00000639300 ARID1BQ8NFD5 2236 aaPredicted RBP14.07□□□□□ -0.16
SCARB2-216ENST00000639300 PRORSD1PA6NEY8 169 aa14.07□□□□□ -0.16
SCARB2-216ENST00000639300 GRID2O43424 1007 aa14.07□□□□□ -0.16
SCARB2-216ENST00000639300 OR6A2O95222 327 aa14.07□□□□□ -0.16
SCARB2-216ENST00000639300 KLK1P06870 262 aa14.07□□□□□ -0.16
SCARB2-216ENST00000639300 NUDT6P53370 316 aa14.07□□□□□ -0.16
SCARB2-216ENST00000639300 SEC13P55735 322 aa14.07□□□□□ -0.16
SCARB2-216ENST00000639300 EIF2B5Q13144 721 aaKnown RBP14.07□□□□□ -0.16
SCARB2-216ENST00000639300 SUSD1Q6UWL2 747 aa14.07□□□□□ -0.16
SCARB2-216ENST00000639300 XKR5Q6UX68 686 aa14.07□□□□□ -0.16
SCARB2-216ENST00000639300 FAM129CQ86XR2 697 aa14.07□□□□□ -0.16
SCARB2-216ENST00000639300 IZUMO1Q8IYV9 350 aa14.07□□□□□ -0.16
SCARB2-216ENST00000639300 SLC22A17Q8WUG5 538 aa14.07□□□□□ -0.16
SCARB2-216ENST00000639300 CLDN25C9JDP6 229 aa14.07□□□□□ -0.16
SCARB2-216ENST00000639300 RASGRP1O95267 797 aa14.07□□□□□ -0.16
SCARB2-216ENST00000639300 HNF1BP35680 557 aa14.07□□□□□ -0.16
SCARB2-216ENST00000639300 HNMTP50135 292 aa14.07□□□□□ -0.16
SCARB2-216ENST00000639300 MS4A2Q01362 244 aa14.07□□□□□ -0.16
SCARB2-216ENST00000639300 DPY19L3Q6ZPD9 716 aa14.07□□□□□ -0.16
SCARB2-216ENST00000639300 KLHL23Q8NBE8 558 aa14.07□□□□□ -0.16
SCARB2-216ENST00000639300 CD244Q9BZW8 370 aa14.07□□□□□ -0.16
SCARB2-216ENST00000639300 C20orf27Q9GZN8 174 aa14.07□□□□□ -0.16
SCARB2-216ENST00000639300 MSRAQ9UJ68 235 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms