RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 CAND1Q86VP6 1230 aaKnown RBP18.23■□□□□ 0.51
CLN6-221ENST00000637494 CILP2Q8IUL8 1156 aa18.23■□□□□ 0.51
CLN6-221ENST00000637494 FAM20CQ8IXL6 584 aa18.23■□□□□ 0.51
CLN6-221ENST00000637494 LMNTD2Q8IXW0 634 aa18.23■□□□□ 0.51
CLN6-221ENST00000637494 SLC35F6Q8N357 371 aa18.23■□□□□ 0.51
CLN6-221ENST00000637494 TTC29Q8NA56 475 aaPredicted RBP18.23■□□□□ 0.51
CLN6-221ENST00000637494 CALML6Q8TD86 181 aa18.23■□□□□ 0.51
CLN6-221ENST00000637494 ACTRT1Q8TDG2 376 aa18.23■□□□□ 0.51
CLN6-221ENST00000637494 ADAMTS17Q8TE56 1095 aa18.23■□□□□ 0.51
CLN6-221ENST00000637494 ANP32BQ92688 251 aaKnown RBP18.23■□□□□ 0.51
CLN6-221ENST00000637494 ZUFSPQ96AP4 578 aa18.23■□□□□ 0.51
CLN6-221ENST00000637494 SERPINB12Q96P63 405 aa18.23■□□□□ 0.51
CLN6-221ENST00000637494 MENTQ9BUN1 341 aa18.23■□□□□ 0.51
CLN6-221ENST00000637494 DHCR7Q9UBM7 475 aaKnown RBP18.23■□□□□ 0.51
CLN6-221ENST00000637494 TSR3Q9UJK0 312 aaKnown RBP18.23■□□□□ 0.51
CLN6-221ENST00000637494 KLHL20Q9Y2M5 609 aa18.23■□□□□ 0.51
CLN6-221ENST00000637494 MAD1L1Q9Y6D9 718 aa18.23■□□□□ 0.51
CLN6-221ENST00000637494 FAM169AQ9Y6X4 670 aa18.23■□□□□ 0.51
CLN6-221ENST00000637494 TARM1B6A8C7 271 aa18.22■□□□□ 0.51
CLN6-221ENST00000637494 PEX12O00623 359 aa18.22■□□□□ 0.51
CLN6-221ENST00000637494 OTX2P32243 289 aa18.22■□□□□ 0.51
CLN6-221ENST00000637494 SSPNQ14714 243 aa18.22■□□□□ 0.51
CLN6-221ENST00000637494 NKAIN1Q4KMZ8 207 aa18.22■□□□□ 0.51
CLN6-221ENST00000637494 YOD1Q5VVQ6 348 aaPredicted RBP18.22■□□□□ 0.51
CLN6-221ENST00000637494 PPIL6Q8IXY8 311 aa18.22■□□□□ 0.51
CLN6-221ENST00000637494 LMNTD1Q8N9Z9 388 aa18.22■□□□□ 0.51
CLN6-221ENST00000637494 HMGCLL1Q8TB92 370 aa18.22■□□□□ 0.51
CLN6-221ENST00000637494 FAM136AQ96C01 138 aa18.22■□□□□ 0.51
CLN6-221ENST00000637494 GBP5Q96PP8 586 aa18.22■□□□□ 0.51
CLN6-221ENST00000637494 PTRH2Q9Y3E5 179 aaKnown RBP18.22■□□□□ 0.51
CLN6-221ENST00000637494 ZNF451Q9Y4E5 1061 aa18.22■□□□□ 0.51
CLN6-221ENST00000637494 PCDHGB7Q9Y5F8 929 aa18.22■□□□□ 0.51
CLN6-221ENST00000637494 ZNF839A8K0R7 811 aa18.21■□□□□ 0.51
CLN6-221ENST00000637494 H3BMH7 237 aa18.21■□□□□ 0.51
CLN6-221ENST00000637494 CES2O00748 559 aa18.21■□□□□ 0.51
CLN6-221ENST00000637494 HCRTR1O43613 425 aa18.21■□□□□ 0.51
CLN6-221ENST00000637494 KLHL41O60662 606 aa18.21■□□□□ 0.51
CLN6-221ENST00000637494 USP1O94782 785 aa18.21■□□□□ 0.51
CLN6-221ENST00000637494 CATP04040 527 aaKnown RBP18.21■□□□□ 0.51
CLN6-221ENST00000637494 GRM7Q14831 915 aa18.21■□□□□ 0.51
CLN6-221ENST00000637494 LONRF1Q17RB8 773 aa18.21■□□□□ 0.51
CLN6-221ENST00000637494 KCTD19Q17RG1 926 aaPredicted RBP18.21■□□□□ 0.51
CLN6-221ENST00000637494 TTLL10Q6ZVT0 673 aa18.21■□□□□ 0.51
CLN6-221ENST00000637494 REXO1L1PQ8IX06 675 aa18.21■□□□□ 0.51
CLN6-221ENST00000637494 FER1L6-AS2Q96M78 137 aa18.21■□□□□ 0.51
CLN6-221ENST00000637494 SELENOSQ9BQE4 189 aa18.21■□□□□ 0.51
CLN6-221ENST00000637494 C20orf96Q9NUD7 363 aaPredicted RBP18.21■□□□□ 0.51
CLN6-221ENST00000637494 RUVBL2Q9Y230 463 aaKnown RBP18.21■□□□□ 0.51
CLN6-221ENST00000637494 BOD1L1Q8NFC6 3051 aa18.2■□□□□ 0.5
CLN6-221ENST00000637494 A0A1B0GX78 115 aa18.2■□□□□ 0.5
CLN6-221ENST00000637494 K7EM74 188 aa18.2■□□□□ 0.5
CLN6-221ENST00000637494 ZNF185O15231 689 aa18.2■□□□□ 0.5
CLN6-221ENST00000637494 SRPX2O60687 465 aaPredicted RBP18.2■□□□□ 0.5
CLN6-221ENST00000637494 MATN4O95460 622 aa18.2■□□□□ 0.5
CLN6-221ENST00000637494 CMPK1P30085 196 aa18.2■□□□□ 0.5
CLN6-221ENST00000637494 HSD17B2P37059 387 aa18.2■□□□□ 0.5
CLN6-221ENST00000637494 GRIA3P42263 894 aa18.2■□□□□ 0.5
CLN6-221ENST00000637494 ATP1A4Q13733 1029 aa18.2■□□□□ 0.5
CLN6-221ENST00000637494 KLHL38Q2WGJ6 581 aa18.2■□□□□ 0.5
CLN6-221ENST00000637494 FAM214AQ32MH5 1076 aa18.2■□□□□ 0.5
CLN6-221ENST00000637494 FAM69BQ5VUD6 431 aa18.2■□□□□ 0.5
CLN6-221ENST00000637494 FCRL6Q6DN72 434 aa18.2■□□□□ 0.5
CLN6-221ENST00000637494 CENPUQ71F23 418 aa18.2■□□□□ 0.5
CLN6-221ENST00000637494 PCGF5Q86SE9 256 aa18.2■□□□□ 0.5
CLN6-221ENST00000637494 HPS6Q86YV9 775 aa18.2■□□□□ 0.5
CLN6-221ENST00000637494 OR9A1PQ8NGU1 263 aa18.2■□□□□ 0.5
CLN6-221ENST00000637494 COG1Q8WTW3 980 aa18.2■□□□□ 0.5
CLN6-221ENST00000637494 PTERQ96BW5 349 aa18.2■□□□□ 0.5
CLN6-221ENST00000637494 MIPEPQ99797 713 aa18.2■□□□□ 0.5
CLN6-221ENST00000637494 FAM167BQ9BTA0 163 aa18.2■□□□□ 0.5
CLN6-221ENST00000637494 ASIC3Q9UHC3 531 aa18.2■□□□□ 0.5
CLN6-221ENST00000637494 SNX12Q9UMY4 172 aa18.2■□□□□ 0.5
CLN6-221ENST00000637494 COMMD10Q9Y6G5 202 aa18.2■□□□□ 0.5
CLN6-221ENST00000637494 RPA3P35244 121 aaPredicted RBP18.19■□□□□ 0.5
CLN6-221ENST00000637494 FOXK1P85037 733 aa18.19■□□□□ 0.5
CLN6-221ENST00000637494 GBX1Q14549 363 aa18.19■□□□□ 0.5
CLN6-221ENST00000637494 SLC9A5Q14940 896 aa18.19■□□□□ 0.5
CLN6-221ENST00000637494 CCSMST1Q4G0I0 132 aa18.19■□□□□ 0.5
CLN6-221ENST00000637494 NEK10Q6ZWH5 1172 aa18.19■□□□□ 0.5
CLN6-221ENST00000637494 ATCAYQ86WG3 371 aa18.19■□□□□ 0.5
CLN6-221ENST00000637494 NAT8LQ8N9F0 302 aa18.19■□□□□ 0.5
CLN6-221ENST00000637494 CLEC1AQ8NC01 280 aa18.19■□□□□ 0.5
CLN6-221ENST00000637494 OR2Y1Q8NGV0 311 aa18.19■□□□□ 0.5
CLN6-221ENST00000637494 SMPDL3AQ92484 453 aa18.19■□□□□ 0.5
CLN6-221ENST00000637494 FBXO6Q9NRD1 293 aaPredicted RBP18.19■□□□□ 0.5
CLN6-221ENST00000637494 CUTCQ9NTM9 273 aa18.19■□□□□ 0.5
CLN6-221ENST00000637494 TRMT1Q9NXH9 659 aaKnown RBP18.19■□□□□ 0.5
CLN6-221ENST00000637494 UTP6Q9NYH9 597 aaKnown RBP18.19■□□□□ 0.5
CLN6-221ENST00000637494 GPR83Q9NYM4 423 aa18.19■□□□□ 0.5
CLN6-221ENST00000637494 IL1RAPL1Q9NZN1 696 aa18.19■□□□□ 0.5
CLN6-221ENST00000637494 KLHL42Q9P2K6 505 aa18.19■□□□□ 0.5
CLN6-221ENST00000637494 NEU2Q9Y3R4 380 aa18.19■□□□□ 0.5
CLN6-221ENST00000637494 TLN1Q9Y490 2541 aaKnown RBP18.18■□□□□ 0.5
CLN6-221ENST00000637494 SPTA1P02549 2419 aa18.18■□□□□ 0.5
CLN6-221ENST00000637494 DSCR3O14972 297 aa18.18■□□□□ 0.5
CLN6-221ENST00000637494 PRICKLE3O43900 615 aaPredicted RBP18.18■□□□□ 0.5
CLN6-221ENST00000637494 DPM1O60762 260 aa18.18■□□□□ 0.5
CLN6-221ENST00000637494 KLF7O75840 302 aaPredicted RBP18.18■□□□□ 0.5
CLN6-221ENST00000637494 CCNDBP1O95273 360 aa18.18■□□□□ 0.5
CLN6-221ENST00000637494 CTSBP07858 339 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms