RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 PARD6AQ9NPB6 346 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 IMP3Q9NV31 184 aaKnown RBP6.53□□□□□ -1.36
UPF3B-205ENST00000636792 PCMTD2Q9NV79 361 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 FAM86C1Q9NVL1 165 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 NUDT4Q9NZJ9 180 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 CPNE7Q9UBL6 633 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 FTSJ1Q9UET6 329 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 TBK1Q9UHD2 729 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 LNPEPQ9UIQ6 1025 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 STK38LQ9Y2H1 464 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 PRKAB1Q9Y478 270 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 PCDHGA1Q9Y5H4 931 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 TNPO3Q9Y5L0 923 aaKnown RBP6.53□□□□□ -1.36
UPF3B-205ENST00000636792 ST14Q9Y5Y6 855 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 GPC6Q9Y625 555 aaPredicted RBP6.53□□□□□ -1.36
UPF3B-205ENST00000636792 PCM1Q15154 2024 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 FAM186AA6NE01 2351 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 GOLGA4Q13439 2230 aaKnown RBP6.53□□□□□ -1.36
UPF3B-205ENST00000636792 ANKRD12Q6UB98 2062 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 GPR179Q6PRD1 2367 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 SMIM23A6NLE4 172 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 RHPN2P1A8MT19 583 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 ARHGEF33A8MVX0 844 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 B4DGG1 531 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 AGPSO00116 658 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 TOX3O15405 576 aaPredicted RBP6.52□□□□□ -1.37
UPF3B-205ENST00000636792 FFAR2O15552 330 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 PHGDHO43175 533 aaKnown RBP6.52□□□□□ -1.37
UPF3B-205ENST00000636792 PAX4O43316 350 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 TNFSF14O43557 240 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 DUX1O43812 170 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 KLK8O60259 260 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 SNX2O60749 519 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 SDC3O75056 442 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 H2AFYO75367 372 aaKnown RBP6.52□□□□□ -1.37
UPF3B-205ENST00000636792 PIAS1O75925 651 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 ZWINTO95229 277 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 CCNDBP1O95273 360 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 S100BP04271 92 aaPredicted RBP6.52□□□□□ -1.37
UPF3B-205ENST00000636792 TPBGLP0DKB5 382 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 CD59P13987 128 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 CKMT2P17540 419 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 ITGB6P18564 788 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 TFEBP19484 476 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 SAT1P21673 171 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 HRH2P25021 359 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 RPL10P27635 214 aaKnown RBP6.52□□□□□ -1.37
UPF3B-205ENST00000636792 PDHA2P29803 388 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 PKLRP30613 574 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 GGT5P36269 586 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 SERPINB5P36952 375 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 ABCG1P45844 678 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 PCDH1Q08174 1060 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 BNIP3Q12983 259 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 C1orf61Q13536 156 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 CSHL1Q14406 222 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 KRT33BQ14525 404 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 KIR2DS3Q14952 304 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 CLCA4Q14CN2 919 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 TGFBIQ15582 683 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 CYP2A13Q16696 494 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 ZNF542PQ5EBM4 170 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 STPG1Q5TH74 334 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 SULT1C3Q6IMI6 304 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 TCEAL6Q6IPX3 200 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 CYB5D1Q6P9G0 228 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 TMEM207Q6UWW9 146 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 TMEM26Q6ZUK4 368 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 UBE2R2Q712K3 238 aaPredicted RBP6.52□□□□□ -1.37
UPF3B-205ENST00000636792 ASCL5Q7RTU5 278 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 PIWIL4Q7Z3Z4 852 aaKnown RBP6.52□□□□□ -1.37
UPF3B-205ENST00000636792 PIP4P1Q86T03 277 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 ISCA2Q86U28 154 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 OOSP2Q86WS3 158 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 VRK3Q8IV63 474 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 SLC35F3Q8IY50 421 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 SRRM1Q8IYB3 904 aaKnown RBP6.52□□□□□ -1.37
UPF3B-205ENST00000636792 CACTIN-AS1Q8N1I8 211 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 ARFGAP2Q8N6H7 521 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 BANPQ8N9N5 519 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 KYQ8NBH2 561 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 OR9A1PQ8NGU1 263 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 OR2L8Q8NGY9 312 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 OR10G6Q8NH81 332 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 RAB3IL1Q8TBN0 382 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 KCTD4Q8WVF5 259 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 TCEAL3Q969E4 200 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 FBXL8Q96CD0 374 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 GRAMD1AQ96CP6 724 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 MRRFQ96E11 262 aaKnown RBP6.52□□□□□ -1.37
UPF3B-205ENST00000636792 ATP6V1G3Q96LB4 118 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 MAGEB10Q96LZ2 347 aaPredicted RBP6.52□□□□□ -1.37
UPF3B-205ENST00000636792 C1QTNF3Q9BXJ4 246 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 IL21RQ9HBE5 538 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 PRDM8Q9NQV8 689 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 IGSF5Q9NSI5 407 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 UCKL1Q9NWZ5 548 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 UTP6Q9NYH9 597 aaKnown RBP6.52□□□□□ -1.37
UPF3B-205ENST00000636792 ZNF624Q9P2J8 865 aaPredicted RBP6.52□□□□□ -1.37
UPF3B-205ENST00000636792 ANKMY1Q9P2S6 941 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms