RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 ATP5DP30049 168 aa17.7■□□□□ 0.42
CLN6-214ENST00000636314 RORAP35398 523 aa17.7■□□□□ 0.42
CLN6-214ENST00000636314 CCNFP41002 786 aa17.7■□□□□ 0.42
CLN6-214ENST00000636314 SLC1A2P43004 574 aa17.7■□□□□ 0.42
CLN6-214ENST00000636314 RPS18P62269 152 aaKnown RBP17.7■□□□□ 0.42
CLN6-214ENST00000636314 IZUMO3Q5VZ72 239 aa17.7■□□□□ 0.42
CLN6-214ENST00000636314 ZNF517Q6ZMY9 492 aaPredicted RBP17.7■□□□□ 0.42
CLN6-214ENST00000636314 PCGF5Q86SE9 256 aa17.7■□□□□ 0.42
CLN6-214ENST00000636314 SYVN1Q86TM6 617 aa17.7■□□□□ 0.42
CLN6-214ENST00000636314 DENND6AQ8IWF6 608 aa17.7■□□□□ 0.42
CLN6-214ENST00000636314 LMNTD2Q8IXW0 634 aa17.7■□□□□ 0.42
CLN6-214ENST00000636314 SYTL1Q8IYJ3 562 aa17.7■□□□□ 0.42
CLN6-214ENST00000636314 AGGF1Q8N302 714 aaeCLIP17.7■□□□□ 0.42
CLN6-214ENST00000636314 LMNTD1Q8N9Z9 388 aa17.7■□□□□ 0.42
CLN6-214ENST00000636314 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.7■□□□□ 0.42
CLN6-214ENST00000636314 CALML6Q8TD86 181 aa17.7■□□□□ 0.42
CLN6-214ENST00000636314 MAGEC3Q8TD91 643 aa17.7■□□□□ 0.42
CLN6-214ENST00000636314 SIGLEC10Q96LC7 697 aa17.7■□□□□ 0.42
CLN6-214ENST00000636314 FBXO6Q9NRD1 293 aaPredicted RBP17.7■□□□□ 0.42
CLN6-214ENST00000636314 PCMTD2Q9NV79 361 aa17.7■□□□□ 0.42
CLN6-214ENST00000636314 IRAK4Q9NWZ3 460 aa17.7■□□□□ 0.42
CLN6-214ENST00000636314 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.7■□□□□ 0.42
CLN6-214ENST00000636314 PCYOX1Q9UHG3 505 aa17.7■□□□□ 0.42
CLN6-214ENST00000636314 TLK1Q9UKI8 766 aa17.7■□□□□ 0.42
CLN6-214ENST00000636314 PYCARDQ9ULZ3 195 aa17.7■□□□□ 0.42
CLN6-214ENST00000636314 ZNF749O43361 778 aa17.69■□□□□ 0.42
CLN6-214ENST00000636314 VPS4BO75351 444 aa17.69■□□□□ 0.42
CLN6-214ENST00000636314 RECKO95980 971 aa17.69■□□□□ 0.42
CLN6-214ENST00000636314 F7P08709 466 aaPredicted RBP17.69■□□□□ 0.42
CLN6-214ENST00000636314 PGAM1P18669 254 aa17.69■□□□□ 0.42
CLN6-214ENST00000636314 UQCRFS1P47985 274 aa17.69■□□□□ 0.42
CLN6-214ENST00000636314 CTBP1Q13363 440 aa17.69■□□□□ 0.42
CLN6-214ENST00000636314 GBX1Q14549 363 aa17.69■□□□□ 0.42
CLN6-214ENST00000636314 TTLL9Q3SXZ7 439 aa17.69■□□□□ 0.42
CLN6-214ENST00000636314 PAPD7Q5XG87 772 aaKnown RBP17.69■□□□□ 0.42
CLN6-214ENST00000636314 FAM20CQ8IXL6 584 aa17.69■□□□□ 0.42
CLN6-214ENST00000636314 KLHL7Q8IXQ5 586 aa17.69■□□□□ 0.42
CLN6-214ENST00000636314 EFCAB3Q8N7B9 438 aa17.69■□□□□ 0.42
CLN6-214ENST00000636314 RUNDC3BQ96NL0 473 aa17.69■□□□□ 0.42
CLN6-214ENST00000636314 FAM167BQ9BTA0 163 aa17.69■□□□□ 0.42
CLN6-214ENST00000636314 INTS7Q9NVH2 962 aaKnown RBP17.69■□□□□ 0.42
CLN6-214ENST00000636314 VPS4AQ9UN37 437 aa17.69■□□□□ 0.42
CLN6-214ENST00000636314 FARSAQ9Y285 508 aaKnown RBP17.69■□□□□ 0.42
CLN6-214ENST00000636314 SAR1BQ9Y6B6 198 aa17.69■□□□□ 0.42
CLN6-214ENST00000636314 AP1M2Q9Y6Q5 423 aa17.69■□□□□ 0.42
CLN6-214ENST00000636314 ZSCAN9O15535 394 aaPredicted RBP17.68■□□□□ 0.42
CLN6-214ENST00000636314 AGFG2O95081 481 aa17.68■□□□□ 0.42
CLN6-214ENST00000636314 GABRA4P48169 554 aa17.68■□□□□ 0.42
CLN6-214ENST00000636314 PMS2P54278 862 aa17.68■□□□□ 0.42
CLN6-214ENST00000636314 SF1Q15637 639 aaKnown RBP17.68■□□□□ 0.42
CLN6-214ENST00000636314 PTCHD3Q3KNS1 767 aa17.68■□□□□ 0.42
CLN6-214ENST00000636314 CCSMST1Q4G0I0 132 aa17.68■□□□□ 0.42
CLN6-214ENST00000636314 ACSBG2Q5FVE4 666 aa17.68■□□□□ 0.42
CLN6-214ENST00000636314 FAM198BQ6UWH4 519 aa17.68■□□□□ 0.42
CLN6-214ENST00000636314 KCNMB4Q86W47 210 aa17.68■□□□□ 0.42
CLN6-214ENST00000636314 SPATA7Q9P0W8 599 aa17.68■□□□□ 0.42
CLN6-214ENST00000636314 SNX7Q9UNH6 387 aa17.68■□□□□ 0.42
CLN6-214ENST00000636314 PLCL2Q9UPR0 1127 aa17.68■□□□□ 0.42
CLN6-214ENST00000636314 KLHL20Q9Y2M5 609 aa17.68■□□□□ 0.42
CLN6-214ENST00000636314 FAM169AQ9Y6X4 670 aa17.68■□□□□ 0.42
CLN6-214ENST00000636314 KRT87PA6NCN2 255 aa17.67■□□□□ 0.42
CLN6-214ENST00000636314 TTLL8A6PVC2 850 aa17.67■□□□□ 0.42
CLN6-214ENST00000636314 C9J4A7 227 aa17.67■□□□□ 0.42
CLN6-214ENST00000636314 HCRTR1O43613 425 aa17.67■□□□□ 0.42
CLN6-214ENST00000636314 MATN4O95460 622 aa17.67■□□□□ 0.42
CLN6-214ENST00000636314 RAB40ALP0C0E4 278 aa17.67■□□□□ 0.42
CLN6-214ENST00000636314 AGXTP21549 392 aa17.67■□□□□ 0.42
CLN6-214ENST00000636314 GNLYP22749 145 aa17.67■□□□□ 0.42
CLN6-214ENST00000636314 PTGIRP43119 386 aa17.67■□□□□ 0.42
CLN6-214ENST00000636314 MPP1Q00013 466 aa17.67■□□□□ 0.42
CLN6-214ENST00000636314 DR1Q01658 176 aa17.67■□□□□ 0.42
CLN6-214ENST00000636314 DHX9Q08211 1270 aaKnown RBP17.67■□□□□ 0.42
CLN6-214ENST00000636314 IL10RAQ13651 578 aa17.67■□□□□ 0.42
CLN6-214ENST00000636314 CRYMQ14894 314 aa17.67■□□□□ 0.42
CLN6-214ENST00000636314 UGT8Q16880 541 aa17.67■□□□□ 0.42
CLN6-214ENST00000636314 KLHL38Q2WGJ6 581 aa17.67■□□□□ 0.42
CLN6-214ENST00000636314 HSP90AA5PQ58FG0 334 aa17.67■□□□□ 0.42
CLN6-214ENST00000636314 FHL5Q5TD97 284 aa17.67■□□□□ 0.42
CLN6-214ENST00000636314 LCN10Q6JVE6 187 aa17.67■□□□□ 0.42
CLN6-214ENST00000636314 SYDE1Q6ZW31 735 aaPredicted RBP17.67■□□□□ 0.42
CLN6-214ENST00000636314 CREG2Q8IUH2 290 aa17.67■□□□□ 0.42
CLN6-214ENST00000636314 DNAJC22Q8N4W6 341 aa17.67■□□□□ 0.42
CLN6-214ENST00000636314 ENDOVQ8N8Q3 282 aaKnown RBP17.67■□□□□ 0.42
CLN6-214ENST00000636314 GABPB2Q8TAK5 448 aaPredicted RBP17.67■□□□□ 0.42
CLN6-214ENST00000636314 KCNJ9Q92806 393 aa17.67■□□□□ 0.42
CLN6-214ENST00000636314 DPH2Q9BQC3 489 aaPredicted RBP17.67■□□□□ 0.42
CLN6-214ENST00000636314 NLNQ9BYT8 704 aa17.67■□□□□ 0.42
CLN6-214ENST00000636314 SPRTNQ9H040 489 aaPredicted RBP17.67■□□□□ 0.42
CLN6-214ENST00000636314 FAM114A2Q9NRY5 505 aa17.67■□□□□ 0.42
CLN6-214ENST00000636314 GALPQ9UBC7 116 aa17.67■□□□□ 0.42
CLN6-214ENST00000636314 PLEKHB1Q9UF11 243 aaPredicted RBP17.67■□□□□ 0.42
CLN6-214ENST00000636314 FBXO5Q9UKT4 447 aa17.67■□□□□ 0.42
CLN6-214ENST00000636314 SRPK3Q9UPE1 567 aa17.67■□□□□ 0.42
CLN6-214ENST00000636314 FER1L5A0AVI2 2057 aa17.67■□□□□ 0.42
CLN6-214ENST00000636314 BANF1O75531 89 aa17.66■□□□□ 0.42
CLN6-214ENST00000636314 DNAJB5O75953 348 aa17.66■□□□□ 0.42
CLN6-214ENST00000636314 FKBP9O95302 570 aa17.66■□□□□ 0.42
CLN6-214ENST00000636314 TTC4O95801 387 aa17.66■□□□□ 0.42
CLN6-214ENST00000636314 CATP04040 527 aaKnown RBP17.66■□□□□ 0.42
CLN6-214ENST00000636314 PAFAH1B1P43034 410 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms