RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 TLR9Q9NR96 1032 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.87□□□□□ -1.15
GPC3-204ENST00000631057 DCAF13Q9NV06 445 aaKnown RBP7.87□□□□□ -1.15
GPC3-204ENST00000631057 WBP1LQ9NX94 342 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 EBF1Q9UH73 591 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 BLOC1S6Q9UL45 172 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 PDE10AQ9Y233 779 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 TMED5Q9Y3A6 229 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 TRIM17Q9Y577 477 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 PCM1Q15154 2024 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 KCNE1BA0A087WTH5 132 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 TRAV19A0A0A6YYK7 116 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 SERTM1A2A2V5 107 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 A8MX80 341 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 H3BMQ9 156 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 WNT9AO14904 365 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 PER2O15055 1255 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 KPNA5O15131 536 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 CREG1O75629 220 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 PRKD3O94806 890 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 POP4O95707 220 aaKnown RBP7.86□□□□□ -1.15
GPC3-204ENST00000631057 PDYNP01213 254 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 SRCP12931 536 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 PFKLP17858 780 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 CYP2A7P20853 494 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 EEF1B2P24534 225 aaKnown RBP7.86□□□□□ -1.15
GPC3-204ENST00000631057 CD70P32970 193 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 SHMT2P34897 504 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 AP1S2P56377 157 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 GABARAPL2P60520 117 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 ZXDBP98169 803 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 CYP4F8P98187 520 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 B4GALNT1Q00973 533 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 ZNF33BQ06732 778 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 ABHD18Q0P651 414 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 TOP3AQ13472 1001 aaPredicted RBP7.86□□□□□ -1.15
GPC3-204ENST00000631057 GBX1Q14549 363 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 PON2Q15165 354 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 NEDD8Q15843 81 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 CPSF6Q16630 551 aaKnown RBP eCLIP7.86□□□□□ -1.15
GPC3-204ENST00000631057 PLA2G4EQ3MJ16 856 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 ATP13A5Q4VNC0 1218 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 PLEKHS1Q5SXH7 462 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 GPR107Q5VW38 600 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 DESI1Q6ICB0 168 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 C22orf39Q6P5X5 142 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 GPR65Q8IYL9 337 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 FAM86B1Q8N7N1 296 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 BEND7Q8N7W2 519 aaPredicted RBP7.86□□□□□ -1.15
GPC3-204ENST00000631057 L3MBTL4Q8NA19 623 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 CLHC1Q8NHS4 586 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 NUDT8Q8WV74 236 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 NELL1Q92832 810 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 TESCQ96BS2 214 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 REXO5Q96IC2 774 aaKnown RBP7.86□□□□□ -1.15
GPC3-204ENST00000631057 COG8Q96MW5 612 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 ZNF641Q96N77 438 aaPredicted RBP7.86□□□□□ -1.15
GPC3-204ENST00000631057 TBCDQ9BTW9 1192 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 CEP44Q9C0F1 390 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 IKZF5Q9H5V7 419 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 CARS2Q9HA77 564 aaKnown RBP7.86□□□□□ -1.15
GPC3-204ENST00000631057 FAM118AQ9NWS6 357 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 ZNHIT2Q9UHR6 403 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 SLC25A13Q9UJS0 675 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 CDC14AQ9UNH5 594 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 FAF1Q9UNN5 650 aaPredicted RBP7.86□□□□□ -1.15
GPC3-204ENST00000631057 HS3ST2Q9Y278 367 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 PCDHB14Q9Y5E9 798 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 ORC6Q9Y5N6 252 aa7.86□□□□□ -1.15
GPC3-204ENST00000631057 TRIM64BA6NI03 449 aa7.85□□□□□ -1.15
GPC3-204ENST00000631057 E2F6O75461 281 aa7.85□□□□□ -1.15
GPC3-204ENST00000631057 ATE1O95260 518 aa7.85□□□□□ -1.15
GPC3-204ENST00000631057 EPORP19235 508 aa7.85□□□□□ -1.15
GPC3-204ENST00000631057 COL9A1P20849 921 aa7.85□□□□□ -1.15
GPC3-204ENST00000631057 CCR7P32248 378 aa7.85□□□□□ -1.15
GPC3-204ENST00000631057 SLC6A12P48065 614 aa7.85□□□□□ -1.15
GPC3-204ENST00000631057 TRPC1P48995 793 aa7.85□□□□□ -1.15
GPC3-204ENST00000631057 SPINT3P49223 89 aa7.85□□□□□ -1.15
GPC3-204ENST00000631057 GZMMP51124 257 aa7.85□□□□□ -1.15
GPC3-204ENST00000631057 RAD23AP54725 363 aa7.85□□□□□ -1.15
GPC3-204ENST00000631057 EMP3P54852 163 aa7.85□□□□□ -1.15
GPC3-204ENST00000631057 TMBIM6P55061 237 aa7.85□□□□□ -1.15
GPC3-204ENST00000631057 PPP2R2BQ00005 443 aa7.85□□□□□ -1.15
GPC3-204ENST00000631057 CTBSQ01459 385 aa7.85□□□□□ -1.15
GPC3-204ENST00000631057 IL18R1Q13478 541 aa7.85□□□□□ -1.15
GPC3-204ENST00000631057 NKG7Q16617 165 aa7.85□□□□□ -1.15
GPC3-204ENST00000631057 DPY19L1Q2PZI1 675 aa7.85□□□□□ -1.15
GPC3-204ENST00000631057 SDE2Q6IQ49 451 aa7.85□□□□□ -1.15
GPC3-204ENST00000631057 SPESP1Q6UW49 350 aa7.85□□□□□ -1.15
GPC3-204ENST00000631057 NEK10Q6ZWH5 1172 aa7.85□□□□□ -1.15
GPC3-204ENST00000631057 HIPK1Q86Z02 1210 aa7.85□□□□□ -1.15
GPC3-204ENST00000631057 ELMOD1Q8N336 334 aa7.85□□□□□ -1.15
GPC3-204ENST00000631057 DRAXINQ8NBI3 349 aaPredicted RBP7.85□□□□□ -1.15
GPC3-204ENST00000631057 OR13F1Q8NGS4 319 aa7.85□□□□□ -1.15
GPC3-204ENST00000631057 MCOLN3Q8TDD5 553 aa7.85□□□□□ -1.15
GPC3-204ENST00000631057 CSGALNACT1Q8TDX6 532 aa7.85□□□□□ -1.15
GPC3-204ENST00000631057 SKA2Q8WVK7 121 aaPredicted RBP7.85□□□□□ -1.15
GPC3-204ENST00000631057 ASB11Q8WXH4 323 aa7.85□□□□□ -1.15
GPC3-204ENST00000631057 MTFMTQ96DP5 389 aaKnown RBP7.85□□□□□ -1.15
GPC3-204ENST00000631057 THAP11Q96EK4 314 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms