RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 PIK3CGP48736 1102 aa9.65□□□□□ -0.86
SOX2-OT-244ENST00000627738 CLCNKAP51800 687 aa9.65□□□□□ -0.86
SOX2-OT-244ENST00000627738 TRAF3Q13114 568 aa9.65□□□□□ -0.86
SOX2-OT-244ENST00000627738 UBAP2LQ14157 1087 aaKnown RBP9.65□□□□□ -0.86
SOX2-OT-244ENST00000627738 GALNTL6Q49A17 601 aa9.65□□□□□ -0.86
SOX2-OT-244ENST00000627738 NXNQ6DKJ4 435 aa9.65□□□□□ -0.86
SOX2-OT-244ENST00000627738 LETMD1Q6P1Q0 360 aa9.65□□□□□ -0.86
SOX2-OT-244ENST00000627738 AGTRAPQ6RW13 159 aa9.65□□□□□ -0.86
SOX2-OT-244ENST00000627738 RD3Q7Z3Z2 195 aa9.65□□□□□ -0.86
SOX2-OT-244ENST00000627738 MILR1Q7Z6M3 343 aa9.65□□□□□ -0.86
SOX2-OT-244ENST00000627738 ABI3BPQ7Z7G0 1075 aa9.65□□□□□ -0.86
SOX2-OT-244ENST00000627738 CLNKQ7Z7G1 428 aa9.65□□□□□ -0.86
SOX2-OT-244ENST00000627738 ZNF295-AS1Q8N0V1 137 aa9.65□□□□□ -0.86
SOX2-OT-244ENST00000627738 CDYL2Q8N8U2 506 aa9.65□□□□□ -0.86
SOX2-OT-244ENST00000627738 GBP7Q8N8V2 638 aaPredicted RBP9.65□□□□□ -0.86
SOX2-OT-244ENST00000627738 SNX31Q8N9S9 440 aa9.65□□□□□ -0.86
SOX2-OT-244ENST00000627738 PHC3Q8NDX5 983 aa9.65□□□□□ -0.86
SOX2-OT-244ENST00000627738 OR13H1Q8NG92 308 aa9.65□□□□□ -0.86
SOX2-OT-244ENST00000627738 OR4F6Q8NGB9 312 aa9.65□□□□□ -0.86
SOX2-OT-244ENST00000627738 OR5AR1Q8NGP9 310 aa9.65□□□□□ -0.86
SOX2-OT-244ENST00000627738 OR9A1PQ8NGU1 263 aa9.65□□□□□ -0.86
SOX2-OT-244ENST00000627738 MAGEC3Q8TD91 643 aa9.65□□□□□ -0.86
SOX2-OT-244ENST00000627738 TWIST2Q8WVJ9 160 aa9.65□□□□□ -0.86
SOX2-OT-244ENST00000627738 STON2Q8WXE9 905 aa9.65□□□□□ -0.86
SOX2-OT-244ENST00000627738 ATL1Q8WXF7 558 aa9.65□□□□□ -0.86
SOX2-OT-244ENST00000627738 TFGQ92734 400 aaPredicted RBP9.65□□□□□ -0.86
SOX2-OT-244ENST00000627738 TSACCQ96A04 125 aaPredicted RBP9.65□□□□□ -0.86
SOX2-OT-244ENST00000627738 MAELQ96JY0 434 aaKnown RBP9.65□□□□□ -0.86
SOX2-OT-244ENST00000627738 ORAI3Q9BRQ5 295 aa9.65□□□□□ -0.86
SOX2-OT-244ENST00000627738 MEAF6Q9HAF1 191 aa9.65□□□□□ -0.86
SOX2-OT-244ENST00000627738 DNAJC11Q9NVH1 559 aa9.65□□□□□ -0.86
SOX2-OT-244ENST00000627738 ARMCX1Q9P291 453 aa9.65□□□□□ -0.86
SOX2-OT-244ENST00000627738 KLQ9UEF7 1012 aa9.65□□□□□ -0.86
SOX2-OT-244ENST00000627738 SLC22A14Q9Y267 594 aa9.65□□□□□ -0.86
SOX2-OT-244ENST00000627738 WDR37Q9Y2I8 494 aa9.65□□□□□ -0.86
SOX2-OT-244ENST00000627738 DNAJC15Q9Y5T4 150 aa9.65□□□□□ -0.86
SOX2-OT-244ENST00000627738 CFAP20Q9Y6A4 193 aaKnown RBP9.65□□□□□ -0.86
SOX2-OT-244ENST00000627738 PRR19A6NJB7 356 aa9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 METTL12A8MUP2 240 aa9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 ANKRD65E5RJM6 399 aa9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 K7ESF4 209 aa9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 MYO1CO00159 1063 aa9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 TOR1BO14657 336 aa9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 TNFRSF10CO14798 259 aa9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 PIP5K1BO14986 540 aa9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 SLC16A8O95907 504 aa9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 PDGFBP01127 241 aaPredicted RBP9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 CAPN1P07384 714 aa9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 SLC35G4P0C7Q5 338 aa9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 THEGLP0DJG4 465 aa9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 HGFP14210 728 aa9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 EPORP19235 508 aa9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 NCF2P19878 526 aaPredicted RBP9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 SRP54P61011 504 aaKnown RBP9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 BNIP1Q12981 228 aa9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 NAE1Q13564 534 aa9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 LACTB2Q53H82 288 aaPredicted RBP9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 SPDYAQ5MJ70 313 aa9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 TCHHL1Q5QJ38 904 aaPredicted RBP9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 CWF19L1Q69YN2 538 aaKnown RBP9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 CAPRIN2Q6IMN6 1127 aaKnown RBP9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 DUS1LQ6P1R4 473 aaKnown RBP9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 EFL1Q7Z2Z2 1120 aaKnown RBP9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 THOC6Q86W42 341 aaKnown RBP9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 DCUN1D3Q8IWE4 304 aa9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 DDIASQ8IXT1 998 aa9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 SLC22A18ASQ8N1D0 253 aa9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 LMNTD1Q8N9Z9 388 aa9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 PPFIBP2Q8ND30 876 aa9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 OR56A3Q8NH54 315 aa9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 METTL6Q8TCB7 284 aa9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 ACTRT2Q8TDY3 377 aa9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 ZNF480Q8WV37 535 aa9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 RAD51AP1Q96B01 352 aa9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 C19orf60Q96EN9 201 aa9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 MED8Q96G25 268 aa9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 SLC6A18Q96N87 628 aa9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 NECAB3Q96P71 396 aaPredicted RBP9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 FERD3LQ96RJ6 166 aa9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 NTMT1Q9BV86 223 aa9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 CCDC106Q9BWC9 280 aa9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 NUSAP1Q9BXS6 441 aaKnown RBP9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 TUBB1Q9H4B7 451 aa9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 NEUROD4Q9HD90 331 aa9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 SAR1AQ9NR31 198 aa9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 PNMA8BQ9ULN7 279 aaPredicted RBP9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 PLAGL1Q9UM63 463 aa9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 G3BP2Q9UN86 482 aaKnown RBP9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 BTRCQ9Y297 605 aa9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 TDRKHQ9Y2W6 561 aaKnown RBP9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 RNF11Q9Y3C5 154 aa9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 PTGDR2Q9Y5Y4 395 aa9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 ST14Q9Y5Y6 855 aa9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 SLCO1B1Q9Y6L6 691 aa9.64□□□□□ -0.87
SOX2-OT-244ENST00000627738 ATP6AP2A0A1C7CYW4 349 aa9.63□□□□□ -0.87
SOX2-OT-244ENST00000627738 PDZK1P1A8MUH7 402 aa9.63□□□□□ -0.87
SOX2-OT-244ENST00000627738 PI15O43692 258 aa9.63□□□□□ -0.87
SOX2-OT-244ENST00000627738 ATP6AP2O75787 350 aa9.63□□□□□ -0.87
SOX2-OT-244ENST00000627738 RASGRP1O95267 797 aa9.63□□□□□ -0.87
SOX2-OT-244ENST00000627738 CLDN9O95484 217 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms