RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 AGERQ15109 404 aa21.43■■□□□ 1.02
PNKP-220ENST00000627232 FXNQ16595 210 aa21.43■■□□□ 1.02
PNKP-220ENST00000627232 RABL3Q5HYI8 236 aa21.43■■□□□ 1.02
PNKP-220ENST00000627232 GRHL2Q6ISB3 625 aa21.43■■□□□ 1.02
PNKP-220ENST00000627232 CYP2R1Q6VVX0 501 aa21.43■■□□□ 1.02
PNKP-220ENST00000627232 ICA1LQ8NDH6 482 aa21.43■■□□□ 1.02
PNKP-220ENST00000627232 FGF14Q92915 247 aa21.43■■□□□ 1.02
PNKP-220ENST00000627232 SLCO4A1Q96BD0 722 aa21.43■■□□□ 1.02
PNKP-220ENST00000627232 FCRL1Q96LA6 429 aa21.43■■□□□ 1.02
PNKP-220ENST00000627232 RIPOR3Q96MK2 946 aa21.43■■□□□ 1.02
PNKP-220ENST00000627232 CGREF1Q99674 301 aa21.43■■□□□ 1.02
PNKP-220ENST00000627232 KCTD14Q9BQ13 255 aaPredicted RBP21.43■■□□□ 1.02
PNKP-220ENST00000627232 ARMC1Q9NVT9 282 aa21.43■■□□□ 1.02
PNKP-220ENST00000627232 SNX13Q9Y5W8 968 aa21.43■■□□□ 1.02
PNKP-220ENST00000627232 MGAT4DA6NG13 374 aa21.42■■□□□ 1.02
PNKP-220ENST00000627232 H0YIV9 168 aa21.42■■□□□ 1.02
PNKP-220ENST00000627232 POP7O75817 140 aaKnown RBP21.42■■□□□ 1.02
PNKP-220ENST00000627232 HSD3B1P14060 373 aa21.42■■□□□ 1.02
PNKP-220ENST00000627232 UQCRBP14927 111 aa21.42■■□□□ 1.02
PNKP-220ENST00000627232 ZNF8P17098 575 aaPredicted RBP21.42■■□□□ 1.02
PNKP-220ENST00000627232 C5AR1P21730 350 aa21.42■■□□□ 1.02
PNKP-220ENST00000627232 HSD3B2P26439 372 aa21.42■■□□□ 1.02
PNKP-220ENST00000627232 HTR1EP28566 365 aa21.42■■□□□ 1.02
PNKP-220ENST00000627232 GRIA3P42263 894 aa21.42■■□□□ 1.02
PNKP-220ENST00000627232 NEK2P51955 445 aa21.42■■□□□ 1.02
PNKP-220ENST00000627232 AQP4P55087 323 aa21.42■■□□□ 1.02
PNKP-220ENST00000627232 YBX1P67809 324 aaKnown RBP21.42■■□□□ 1.02
PNKP-220ENST00000627232 E2F2Q14209 437 aa21.42■■□□□ 1.02
PNKP-220ENST00000627232 INPP5AQ14642 412 aa21.42■■□□□ 1.02
PNKP-220ENST00000627232 CST6Q15828 149 aa21.42■■□□□ 1.02
PNKP-220ENST00000627232 CCSMST1Q4G0I0 132 aa21.42■■□□□ 1.02
PNKP-220ENST00000627232 AASDHQ4L235 1098 aaPredicted RBP21.42■■□□□ 1.02
PNKP-220ENST00000627232 XKR6Q5GH73 641 aa21.42■■□□□ 1.02
PNKP-220ENST00000627232 PNCKQ6P2M8 343 aa21.42■■□□□ 1.02
PNKP-220ENST00000627232 XKR5Q6UX68 686 aa21.42■■□□□ 1.02
PNKP-220ENST00000627232 ZNF547Q8IVP9 402 aa21.42■■□□□ 1.02
PNKP-220ENST00000627232 OR8J3Q8NGG0 315 aa21.42■■□□□ 1.02
PNKP-220ENST00000627232 DNAJB8Q8NHS0 232 aa21.42■■□□□ 1.02
PNKP-220ENST00000627232 METTL2AQ96IZ6 378 aaKnown RBP21.42■■□□□ 1.02
PNKP-220ENST00000627232 ZDHHC4Q9NPG8 344 aa21.42■■□□□ 1.02
PNKP-220ENST00000627232 CCM2LQ9NUG4 571 aaPredicted RBP21.42■■□□□ 1.02
PNKP-220ENST00000627232 SLAMF8Q9P0V8 285 aa21.42■■□□□ 1.02
PNKP-220ENST00000627232 CNOT11Q9UKZ1 510 aaKnown RBP21.42■■□□□ 1.02
PNKP-220ENST00000627232 CHD9Q3L8U1 2897 aa21.42■■□□□ 1.02
PNKP-220ENST00000627232 ANTXRLA6NF34 631 aa21.41■■□□□ 1.02
PNKP-220ENST00000627232 ARPC2O15144 300 aa21.41■■□□□ 1.02
PNKP-220ENST00000627232 SLC16A8O95907 504 aa21.41■■□□□ 1.02
PNKP-220ENST00000627232 PNLIPRP1P54315 467 aa21.41■■□□□ 1.02
PNKP-220ENST00000627232 DOC2AQ14183 400 aa21.41■■□□□ 1.02
PNKP-220ENST00000627232 AGBL4Q5VU57 503 aa21.41■■□□□ 1.02
PNKP-220ENST00000627232 WDR20Q8TBZ3 569 aa21.41■■□□□ 1.02
PNKP-220ENST00000627232 FOXJ1Q92949 421 aa21.41■■□□□ 1.02
PNKP-220ENST00000627232 CLEC1BQ9P126 229 aa21.41■■□□□ 1.02
PNKP-220ENST00000627232 MID1O15344 667 aa21.4■■□□□ 1.02
PNKP-220ENST00000627232 AMD1P17707 334 aa21.4■■□□□ 1.02
PNKP-220ENST00000627232 TEAD1P28347 426 aa21.4■■□□□ 1.02
PNKP-220ENST00000627232 RPA4Q13156 261 aa21.4■■□□□ 1.02
PNKP-220ENST00000627232 MAPKAPK3Q16644 382 aa21.4■■□□□ 1.02
PNKP-220ENST00000627232 FAM174BQ3ZCQ3 159 aa21.4■■□□□ 1.02
PNKP-220ENST00000627232 SLC44A4Q53GD3 710 aa21.4■■□□□ 1.02
PNKP-220ENST00000627232 UNC5DQ6UXZ4 953 aa21.4■■□□□ 1.02
PNKP-220ENST00000627232 CHPFQ8IZ52 775 aa21.4■■□□□ 1.02
PNKP-220ENST00000627232 AADATQ8N5Z0 425 aa21.4■■□□□ 1.02
PNKP-220ENST00000627232 ZNF513Q8N8E2 541 aaPredicted RBP21.4■■□□□ 1.02
PNKP-220ENST00000627232 CSGALNACT1Q8TDX6 532 aa21.4■■□□□ 1.02
PNKP-220ENST00000627232 MED8Q96G25 268 aa21.4■■□□□ 1.02
PNKP-220ENST00000627232 OR4K3Q96R72 315 aa21.4■■□□□ 1.02
PNKP-220ENST00000627232 BRF2Q9HAW0 419 aa21.4■■□□□ 1.02
PNKP-220ENST00000627232 ITM2CQ9NQX7 267 aa21.4■■□□□ 1.02
PNKP-220ENST00000627232 DLGAP4Q9Y2H0 992 aa21.4■■□□□ 1.02
PNKP-220ENST00000627232 AP3M1Q9Y2T2 418 aa21.4■■□□□ 1.02
PNKP-220ENST00000627232 DNMT3AQ9Y6K1 912 aaPredicted RBP21.4■■□□□ 1.02
PNKP-220ENST00000627232 KANSL1LA0AUZ9 987 aa21.39■■□□□ 1.02
PNKP-220ENST00000627232 ZNF839A8K0R7 811 aa21.39■■□□□ 1.02
PNKP-220ENST00000627232 E7EQ34 232 aa21.39■■□□□ 1.02
PNKP-220ENST00000627232 PGRP06401 933 aa21.39■■□□□ 1.02
PNKP-220ENST00000627232 GPIP06744 558 aa21.39■■□□□ 1.02
PNKP-220ENST00000627232 CD22P20273 847 aa21.39■■□□□ 1.02
PNKP-220ENST00000627232 ACADLP28330 430 aa21.39■■□□□ 1.02
PNKP-220ENST00000627232 MTHFRP42898 656 aa21.39■■□□□ 1.02
PNKP-220ENST00000627232 TAS2R38P59533 333 aa21.39■■□□□ 1.02
PNKP-220ENST00000627232 SPANXN4Q5MJ08 99 aa21.39■■□□□ 1.02
PNKP-220ENST00000627232 CAPN13Q6MZZ7 669 aaPredicted RBP21.39■■□□□ 1.02
PNKP-220ENST00000627232 MTSS1LQ765P7 747 aa21.39■■□□□ 1.02
PNKP-220ENST00000627232 C11orf96Q7Z7L8 435 aa21.39■■□□□ 1.02
PNKP-220ENST00000627232 PROSER1Q86XN7 944 aa21.39■■□□□ 1.02
PNKP-220ENST00000627232 PLA2G15Q8NCC3 412 aa21.39■■□□□ 1.02
PNKP-220ENST00000627232 OR9A1PQ8NGU1 263 aa21.39■■□□□ 1.02
PNKP-220ENST00000627232 GTF2H4Q92759 462 aa21.39■■□□□ 1.02
PNKP-220ENST00000627232 TESCQ96BS2 214 aa21.39■■□□□ 1.02
PNKP-220ENST00000627232 TMEM74Q96NL1 305 aa21.39■■□□□ 1.02
PNKP-220ENST00000627232 GDF15Q99988 308 aa21.39■■□□□ 1.02
PNKP-220ENST00000627232 EGFL7Q9UHF1 273 aa21.39■■□□□ 1.02
PNKP-220ENST00000627232 PCDHB3Q9Y5E6 796 aa21.39■■□□□ 1.02
PNKP-220ENST00000627232 KCNE2Q9Y6J6 123 aa21.39■■□□□ 1.02
PNKP-220ENST00000627232 MAGEA13PA6NCF6 341 aa21.39■■□□□ 1.01
PNKP-220ENST00000627232 IGLON5A6NGN9 336 aa21.39■■□□□ 1.01
PNKP-220ENST00000627232 UMPSP11172 480 aa21.39■■□□□ 1.01
PNKP-220ENST00000627232 HSPA13P48723 471 aa21.39■■□□□ 1.01
PNKP-220ENST00000627232 GALK1P51570 392 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms