RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 PTPRRQ15256 657 aa7□□□□□ -1.29
CTNNA1-244ENST00000627109 ZC3H12BQ5HYM0 836 aaKnown RBP7□□□□□ -1.29
CTNNA1-244ENST00000627109 ATG9BQ674R7 924 aa7□□□□□ -1.29
CTNNA1-244ENST00000627109 SERPINA9Q86WD7 417 aa7□□□□□ -1.29
CTNNA1-244ENST00000627109 L3MBTL4Q8NA19 623 aa7□□□□□ -1.29
CTNNA1-244ENST00000627109 FIG4Q92562 907 aa7□□□□□ -1.29
CTNNA1-244ENST00000627109 GFM2Q969S9 779 aaKnown RBP7□□□□□ -1.29
CTNNA1-244ENST00000627109 ZNF566Q969W8 418 aa7□□□□□ -1.29
CTNNA1-244ENST00000627109 TESCQ96BS2 214 aa7□□□□□ -1.29
CTNNA1-244ENST00000627109 ISOC1Q96CN7 298 aa7□□□□□ -1.29
CTNNA1-244ENST00000627109 THAP11Q96EK4 314 aa7□□□□□ -1.29
CTNNA1-244ENST00000627109 C11orf24Q96F05 449 aaPredicted RBP7□□□□□ -1.29
CTNNA1-244ENST00000627109 CCDC138Q96M89 665 aa7□□□□□ -1.29
CTNNA1-244ENST00000627109 YIPF4Q9BSR8 244 aa7□□□□□ -1.29
CTNNA1-244ENST00000627109 CPEB1Q9BZB8 566 aaKnown RBP7□□□□□ -1.29
CTNNA1-244ENST00000627109 CCDC90BQ9GZT6 254 aa7□□□□□ -1.29
CTNNA1-244ENST00000627109 PAIP1Q9H074 479 aaKnown RBP7□□□□□ -1.29
CTNNA1-244ENST00000627109 ABCG8Q9H221 673 aa7□□□□□ -1.29
CTNNA1-244ENST00000627109 ABCB8Q9NUT2 735 aa7□□□□□ -1.29
CTNNA1-244ENST00000627109 PIKFYVEQ9Y2I7 2098 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 STMND1H3BQB6 276 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 TEX28O15482 410 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 GPR39O43194 453 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 LDLRP01130 860 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 SLC2A4P14672 509 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 BPIP17213 487 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 ACVR2AP27037 513 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 HTRA4P83105 476 aaPredicted RBP6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 SEMG2Q02383 582 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 MTAPQ13126 283 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 ZXDCQ2QGD7 858 aaPredicted RBP6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 ARMC12Q5T9G4 340 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 TPGS1Q6ZTW0 290 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 NEK10Q6ZWH5 1172 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 ZSWIM9Q86XI8 627 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 ZBTB2Q8N680 514 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 SLC22A17Q8WUG5 538 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 MTFMTQ96DP5 389 aaKnown RBP6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 DEPDC7Q96QD5 511 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 BDH2Q9BUT1 245 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 ZFP14Q9HCL3 533 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 USP22Q9UPT9 525 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 ZNF510Q9Y2H8 683 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 CHD7Q9P2D1 2997 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 ZDBF2Q9HCK1 2354 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 GOLGA4Q13439 2230 aaKnown RBP6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 K7EPI3 171 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 SLC16A5O15375 505 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 SEC14L2O76054 403 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 LRG1P02750 347 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 ALBP02768 609 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 ANXA6P08133 673 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 MPC1LP0DKB6 136 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 CSKP41240 450 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 YAP1P46937 504 aaKnown RBP6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 ARSFP54793 590 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 B4GALNT1Q00973 533 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 TSTA3Q13630 321 aaPredicted RBP6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 TUBA3CQ13748 450 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 NKG7Q16617 165 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 C18orf21Q32NC0 220 aaPredicted RBP6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 CCNYL2Q5T2Q4 361 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 GTF2IRD2BQ6EKJ0 949 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 GLYATQ6IB77 296 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 MILR1Q7Z6M3 343 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 GTF2IRD2Q86UP8 949 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 STK32CQ86UX6 486 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 TMC8Q8IU68 726 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 NXPE1Q8N323 547 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 SVOPLQ8N434 492 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 PLPP7Q8NBV4 271 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 OR13F1Q8NGS4 319 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 FIBINQ8TAL6 211 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 SLC13A3Q8WWT9 602 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 LZICQ8WZA0 190 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 MBOAT4Q96T53 435 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 ZBTB18Q99592 522 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 CPPED1Q9BRF8 314 aaPredicted RBP6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 CHID1Q9BWS9 393 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 OSBPL10Q9BXB5 764 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 CIPCQ9C0C6 399 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 KAT8Q9H7Z6 458 aaKnown RBP6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 IPPKQ9H8X2 491 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 VAPAQ9P0L0 249 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 PTPRZ1P23471 2315 aaPredicted RBP6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 EPOPA6NHQ4 379 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 RGS14O43566 566 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 TBL1XO60907 577 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 RFPL2O75678 378 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 SCELO95171 688 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 PRAMEF1O95521 474 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 BMP8BP34820 402 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 HNF1BP35680 557 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 RHOAP61586 193 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 SP140Q13342 867 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 DAG1Q14118 895 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 AP5B1Q2VPB7 878 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 RBM48Q5RL73 367 aaKnown RBP6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 XAF1Q6GPH4 301 aa6.99□□□□□ -1.29
CTNNA1-244ENST00000627109 GRAMD4Q6IC98 578 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms