RNA–Protein interactions for RNA: ENST00000623466.1

PCDHB17P-202, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 3,066 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-202ENST00000623466 FEM1AQ9BSK4 669 aa13.09□□□□□ -0.31
PCDHB17P-202ENST00000623466 KLF16Q9BXK1 252 aaPredicted RBP13.09□□□□□ -0.31
PCDHB17P-202ENST00000623466 GPR63Q9BZJ6 419 aa13.09□□□□□ -0.31
PCDHB17P-202ENST00000623466 MUC13Q9H3R2 512 aa13.09□□□□□ -0.31
PCDHB17P-202ENST00000623466 ACTL8Q9H568 366 aa13.09□□□□□ -0.31
PCDHB17P-202ENST00000623466 CD274Q9NZQ7 290 aa13.09□□□□□ -0.31
PCDHB17P-202ENST00000623466 AFF4Q9UHB7 1163 aaKnown RBP13.09□□□□□ -0.31
PCDHB17P-202ENST00000623466 ZNF229Q9UJW7 825 aa13.09□□□□□ -0.31
PCDHB17P-202ENST00000623466 POLR3HQ9Y535 204 aaPredicted RBP13.09□□□□□ -0.31
PCDHB17P-202ENST00000623466 COMMD10Q9Y6G5 202 aa13.09□□□□□ -0.31
PCDHB17P-202ENST00000623466 EYSQ5T1H1 3165 aa13.09□□□□□ -0.31
PCDHB17P-202ENST00000623466 FAM234BA2RU67 622 aa13.09□□□□□ -0.31
PCDHB17P-202ENST00000623466 GSTA4O15217 222 aa13.09□□□□□ -0.31
PCDHB17P-202ENST00000623466 HOXC11O43248 304 aaPredicted RBP13.09□□□□□ -0.31
PCDHB17P-202ENST00000623466 JRKO75564 520 aa13.09□□□□□ -0.31
PCDHB17P-202ENST00000623466 RPS17P08708 135 aaKnown RBP13.09□□□□□ -0.31
PCDHB17P-202ENST00000623466 MSL3P1P0C860 447 aa13.09□□□□□ -0.31
PCDHB17P-202ENST00000623466 UROSP10746 265 aa13.09□□□□□ -0.31
PCDHB17P-202ENST00000623466 COL6A1P12109 1028 aa13.09□□□□□ -0.31
PCDHB17P-202ENST00000623466 CSF2RAP15509 400 aa13.09□□□□□ -0.31
PCDHB17P-202ENST00000623466 GABRR2P28476 465 aa13.09□□□□□ -0.31
PCDHB17P-202ENST00000623466 TGFBR1P36897 503 aa13.09□□□□□ -0.31
PCDHB17P-202ENST00000623466 STK19P49842 368 aaPredicted RBP13.09□□□□□ -0.31
PCDHB17P-202ENST00000623466 ERVPABLB-1P60509 514 aa13.09□□□□□ -0.31
PCDHB17P-202ENST00000623466 PTGR1Q14914 329 aa13.09□□□□□ -0.31
PCDHB17P-202ENST00000623466 CTF1Q16619 201 aa13.09□□□□□ -0.31
PCDHB17P-202ENST00000623466 ARMC12Q5T9G4 340 aa13.09□□□□□ -0.31
PCDHB17P-202ENST00000623466 LETMD1Q6P1Q0 360 aa13.09□□□□□ -0.31
PCDHB17P-202ENST00000623466 GALNT5Q7Z7M9 940 aa13.09□□□□□ -0.31
PCDHB17P-202ENST00000623466 ZFAND4Q86XD8 727 aa13.09□□□□□ -0.31
PCDHB17P-202ENST00000623466 CNDP2Q96KP4 475 aaKnown RBP13.09□□□□□ -0.31
PCDHB17P-202ENST00000623466 ZNF583Q96ND8 569 aa13.09□□□□□ -0.31
PCDHB17P-202ENST00000623466 BRINP2Q9C0B6 783 aa13.09□□□□□ -0.31
PCDHB17P-202ENST00000623466 GIMAP4Q9NUV9 329 aa13.09□□□□□ -0.31
PCDHB17P-202ENST00000623466 TAS2R13Q9NYV9 303 aa13.09□□□□□ -0.31
PCDHB17P-202ENST00000623466 FNIP2Q9P278 1114 aa13.09□□□□□ -0.31
PCDHB17P-202ENST00000623466 ADGRE2Q9UHX3 823 aa13.09□□□□□ -0.31
PCDHB17P-202ENST00000623466 MAGEL2Q9UJ55 1249 aa13.09□□□□□ -0.31
PCDHB17P-202ENST00000623466 FBXO10Q9UK96 956 aa13.09□□□□□ -0.31
PCDHB17P-202ENST00000623466 SNX5Q9Y5X3 404 aa13.09□□□□□ -0.31
PCDHB17P-202ENST00000623466 VPS4BO75351 444 aa13.08□□□□□ -0.32
PCDHB17P-202ENST00000623466 CAPN1P07384 714 aa13.08□□□□□ -0.32
PCDHB17P-202ENST00000623466 LPOP22079 712 aaPredicted RBP13.08□□□□□ -0.32
PCDHB17P-202ENST00000623466 MAP2K4P45985 399 aa13.08□□□□□ -0.32
PCDHB17P-202ENST00000623466 P2RX3P56373 397 aa13.08□□□□□ -0.32
PCDHB17P-202ENST00000623466 VBP1P61758 197 aa13.08□□□□□ -0.32
PCDHB17P-202ENST00000623466 RAD51Q06609 339 aa13.08□□□□□ -0.32
PCDHB17P-202ENST00000623466 TUBA3CQ13748 450 aa13.08□□□□□ -0.32
PCDHB17P-202ENST00000623466 CBX2Q14781 532 aaPredicted RBP13.08□□□□□ -0.32
PCDHB17P-202ENST00000623466 SUZ12Q15022 739 aaKnown RBP13.08□□□□□ -0.32
PCDHB17P-202ENST00000623466 NR6A1Q15406 480 aa13.08□□□□□ -0.32
PCDHB17P-202ENST00000623466 RFTN2Q52LD8 501 aaPredicted RBP13.08□□□□□ -0.32
PCDHB17P-202ENST00000623466 RFLNAQ6ZTI6 216 aa13.08□□□□□ -0.32
PCDHB17P-202ENST00000623466 GPRIN3Q6ZVF9 776 aa13.08□□□□□ -0.32
PCDHB17P-202ENST00000623466 DNAJC5GQ8N7S2 189 aa13.08□□□□□ -0.32
PCDHB17P-202ENST00000623466 ZNF555Q8NEP9 628 aa13.08□□□□□ -0.32
PCDHB17P-202ENST00000623466 METTL6Q8TCB7 284 aa13.08□□□□□ -0.32
PCDHB17P-202ENST00000623466 ADAMTS19Q8TE59 1207 aa13.08□□□□□ -0.32
PCDHB17P-202ENST00000623466 CDK5RAP1Q96SZ6 601 aaKnown RBP13.08□□□□□ -0.32
PCDHB17P-202ENST00000623466 RHNO1Q9BSD3 238 aa13.08□□□□□ -0.32
PCDHB17P-202ENST00000623466 NEK6Q9HC98 313 aa13.08□□□□□ -0.32
PCDHB17P-202ENST00000623466 NLE1Q9NVX2 485 aaPredicted RBP13.08□□□□□ -0.32
PCDHB17P-202ENST00000623466 FAM8A1Q9UBU6 413 aa13.08□□□□□ -0.32
PCDHB17P-202ENST00000623466 ZMYM5Q9UJ78 669 aa13.08□□□□□ -0.32
PCDHB17P-202ENST00000623466 KRT87PA6NCN2 255 aa13.08□□□□□ -0.32
PCDHB17P-202ENST00000623466 PITPNM1O00562 1244 aa13.08□□□□□ -0.32
PCDHB17P-202ENST00000623466 RGS13O14921 159 aa13.08□□□□□ -0.32
PCDHB17P-202ENST00000623466 MITFO75030 526 aaPredicted RBP13.08□□□□□ -0.32
PCDHB17P-202ENST00000623466 PRKD3O94806 890 aa13.08□□□□□ -0.32
PCDHB17P-202ENST00000623466 ALOX5P09917 674 aa13.08□□□□□ -0.32
PCDHB17P-202ENST00000623466 CYP4B1P13584 511 aa13.08□□□□□ -0.32
PCDHB17P-202ENST00000623466 CTSOP43234 321 aaPredicted RBP13.08□□□□□ -0.32
PCDHB17P-202ENST00000623466 PPP2R2BQ00005 443 aa13.08□□□□□ -0.32
PCDHB17P-202ENST00000623466 GALNT7Q86SF2 657 aa13.08□□□□□ -0.32
PCDHB17P-202ENST00000623466 PHACTR4Q8IZ21 702 aa13.08□□□□□ -0.32
PCDHB17P-202ENST00000623466 HDAC2Q92769 488 aaKnown RBP13.08□□□□□ -0.32
PCDHB17P-202ENST00000623466 LINGO1Q96FE5 620 aa13.08□□□□□ -0.32
PCDHB17P-202ENST00000623466 NODALQ96S42 347 aa13.08□□□□□ -0.32
PCDHB17P-202ENST00000623466 IRF2BPLQ9H1B7 796 aa13.08□□□□□ -0.32
PCDHB17P-202ENST00000623466 TMEM39AQ9NV64 488 aa13.08□□□□□ -0.32
PCDHB17P-202ENST00000623466 COMMD8Q9NX08 183 aa13.08□□□□□ -0.32
PCDHB17P-202ENST00000623466 A0A1W2PRU2 124 aa13.07□□□□□ -0.32
PCDHB17P-202ENST00000623466 C16orf96A6NNT2 1141 aa13.07□□□□□ -0.32
PCDHB17P-202ENST00000623466 SYCE1LA8MT33 242 aa13.07□□□□□ -0.32
PCDHB17P-202ENST00000623466 E5RI56 91 aa13.07□□□□□ -0.32
PCDHB17P-202ENST00000623466 SLC1A7O00341 560 aa13.07□□□□□ -0.32
PCDHB17P-202ENST00000623466 TRIM16O95361 564 aa13.07□□□□□ -0.32
PCDHB17P-202ENST00000623466 CLDN7O95471 211 aa13.07□□□□□ -0.32
PCDHB17P-202ENST00000623466 FTH1P02794 183 aa13.07□□□□□ -0.32
PCDHB17P-202ENST00000623466 FMO3P31513 532 aa13.07□□□□□ -0.32
PCDHB17P-202ENST00000623466 ETV3P41162 512 aa13.07□□□□□ -0.32
PCDHB17P-202ENST00000623466 GDF5P43026 501 aa13.07□□□□□ -0.32
PCDHB17P-202ENST00000623466 SUOXP51687 545 aa13.07□□□□□ -0.32
PCDHB17P-202ENST00000623466 CHRNEQ04844 493 aa13.07□□□□□ -0.32
PCDHB17P-202ENST00000623466 GTDC1Q4AE62 458 aa13.07□□□□□ -0.32
PCDHB17P-202ENST00000623466 CTSL3PQ5NE16 218 aa13.07□□□□□ -0.32
PCDHB17P-202ENST00000623466 RBM48Q5RL73 367 aaKnown RBP13.07□□□□□ -0.32
PCDHB17P-202ENST00000623466 TTC23Q5W5X9 447 aa13.07□□□□□ -0.32
PCDHB17P-202ENST00000623466 BBS7Q8IWZ6 715 aa13.07□□□□□ -0.32
PCDHB17P-202ENST00000623466 OR2T12Q8NG77 320 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms