RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 SPATA24Q86W54 205 aa15.89■□□□□ 0.13
LDB3-208ENST00000623007 HEATR4Q86WZ0 1026 aa15.89■□□□□ 0.13
LDB3-208ENST00000623007 DCUN1D3Q8IWE4 304 aa15.89■□□□□ 0.13
LDB3-208ENST00000623007 PQLC1Q8N2U9 271 aa15.89■□□□□ 0.13
LDB3-208ENST00000623007 OR8J3Q8NGG0 315 aa15.89■□□□□ 0.13
LDB3-208ENST00000623007 WDR34Q96EX3 536 aa15.89■□□□□ 0.13
LDB3-208ENST00000623007 HAUS8Q9BT25 410 aa15.89■□□□□ 0.13
LDB3-208ENST00000623007 PCBD2Q9H0N5 130 aa15.89■□□□□ 0.13
LDB3-208ENST00000623007 WDR26Q9H7D7 661 aa15.89■□□□□ 0.13
LDB3-208ENST00000623007 NCKAP1Q9Y2A7 1128 aa15.89■□□□□ 0.13
LDB3-208ENST00000623007 TSC22D4Q9Y3Q8 395 aa15.89■□□□□ 0.13
LDB3-208ENST00000623007 PRORSD1PA6NEY8 169 aa15.88■□□□□ 0.13
LDB3-208ENST00000623007 TMEM202A6NGA9 273 aa15.88■□□□□ 0.13
LDB3-208ENST00000623007 IGLON5A6NGN9 336 aa15.88■□□□□ 0.13
LDB3-208ENST00000623007 PLRG1O43660 514 aaKnown RBP15.88■□□□□ 0.13
LDB3-208ENST00000623007 IMPA1P29218 277 aa15.88■□□□□ 0.13
LDB3-208ENST00000623007 PBLDP30039 288 aaPredicted RBP15.88■□□□□ 0.13
LDB3-208ENST00000623007 CTHP32929 405 aa15.88■□□□□ 0.13
LDB3-208ENST00000623007 PREPP48147 710 aa15.88■□□□□ 0.13
LDB3-208ENST00000623007 NME5P56597 212 aa15.88■□□□□ 0.13
LDB3-208ENST00000623007 DMPKQ09013 629 aa15.88■□□□□ 0.13
LDB3-208ENST00000623007 LRRC74AQ0VAA2 488 aa15.88■□□□□ 0.13
LDB3-208ENST00000623007 GRSF1Q12849 480 aaKnown RBP eCLIP15.88■□□□□ 0.13
LDB3-208ENST00000623007 PROSER1Q86XN7 944 aa15.88■□□□□ 0.13
LDB3-208ENST00000623007 SLC15A3Q8IY34 581 aa15.88■□□□□ 0.13
LDB3-208ENST00000623007 PLCD3Q8N3E9 789 aa15.88■□□□□ 0.13
LDB3-208ENST00000623007 TESCQ96BS2 214 aa15.88■□□□□ 0.13
LDB3-208ENST00000623007 PKP4Q99569 1192 aa15.88■□□□□ 0.13
LDB3-208ENST00000623007 C1QTNF2Q9BXJ5 285 aa15.88■□□□□ 0.13
LDB3-208ENST00000623007 ACPTQ9BZG2 426 aa15.88■□□□□ 0.13
LDB3-208ENST00000623007 KLHL4Q9C0H6 718 aa15.88■□□□□ 0.13
LDB3-208ENST00000623007 ATG10Q9H0Y0 220 aa15.88■□□□□ 0.13
LDB3-208ENST00000623007 ACTR3BQ9P1U1 418 aa15.88■□□□□ 0.13
LDB3-208ENST00000623007 ADGRE2Q9UHX3 823 aa15.88■□□□□ 0.13
LDB3-208ENST00000623007 RUVBL1Q9Y265 456 aaKnown RBP15.88■□□□□ 0.13
LDB3-208ENST00000623007 PCDHA9Q9Y5H5 950 aa15.88■□□□□ 0.13
LDB3-208ENST00000623007 K7ESM1 405 aa15.87■□□□□ 0.13
LDB3-208ENST00000623007 FXYD1O00168 92 aa15.87■□□□□ 0.13
LDB3-208ENST00000623007 KDM1AO60341 852 aa15.87■□□□□ 0.13
LDB3-208ENST00000623007 RNASEH2AO75792 299 aaKnown RBP15.87■□□□□ 0.13
LDB3-208ENST00000623007 SLC16A8O95907 504 aa15.87■□□□□ 0.13
LDB3-208ENST00000623007 UMPSP11172 480 aa15.87■□□□□ 0.13
LDB3-208ENST00000623007 MYCLP1P12525 358 aaPredicted RBP15.87■□□□□ 0.13
LDB3-208ENST00000623007 CD1EP15812 388 aa15.87■□□□□ 0.13
LDB3-208ENST00000623007 ACADLP28330 430 aa15.87■□□□□ 0.13
LDB3-208ENST00000623007 TIE1P35590 1138 aa15.87■□□□□ 0.13
LDB3-208ENST00000623007 ZFP36L2P47974 494 aaKnown RBP15.87■□□□□ 0.13
LDB3-208ENST00000623007 TAS2R38P59533 333 aa15.87■□□□□ 0.13
LDB3-208ENST00000623007 PWP1Q13610 501 aa15.87■□□□□ 0.13
LDB3-208ENST00000623007 KIAA0040Q15053 153 aa15.87■□□□□ 0.13
LDB3-208ENST00000623007 USP39Q53GS9 565 aaKnown RBP15.87■□□□□ 0.13
LDB3-208ENST00000623007 MTX3Q5HYI7 312 aa15.87■□□□□ 0.13
LDB3-208ENST00000623007 LAYNQ6UX15 382 aa15.87■□□□□ 0.13
LDB3-208ENST00000623007 PTRH1Q86Y79 214 aaKnown RBP15.87■□□□□ 0.13
LDB3-208ENST00000623007 SFTPA1Q8IWL2 248 aa15.87■□□□□ 0.13
LDB3-208ENST00000623007 SYTL1Q8IYJ3 562 aa15.87■□□□□ 0.13
LDB3-208ENST00000623007 SLC13A3Q8WWT9 602 aa15.87■□□□□ 0.13
LDB3-208ENST00000623007 MED8Q96G25 268 aa15.87■□□□□ 0.13
LDB3-208ENST00000623007 FCRL1Q96LA6 429 aa15.87■□□□□ 0.13
LDB3-208ENST00000623007 TIMM29Q9BSF4 260 aa15.87■□□□□ 0.13
LDB3-208ENST00000623007 SGPP1Q9BX95 441 aa15.87■□□□□ 0.13
LDB3-208ENST00000623007 PITHD1Q9GZP4 211 aaPredicted RBP15.87■□□□□ 0.13
LDB3-208ENST00000623007 CLMPQ9H6B4 373 aa15.87■□□□□ 0.13
LDB3-208ENST00000623007 BATF3Q9NR55 127 aa15.87■□□□□ 0.13
LDB3-208ENST00000623007 SPATA7Q9P0W8 599 aa15.87■□□□□ 0.13
LDB3-208ENST00000623007 VPS29Q9UBQ0 182 aa15.87■□□□□ 0.13
LDB3-208ENST00000623007 PPT2Q9UMR5 302 aa15.87■□□□□ 0.13
LDB3-208ENST00000623007 TCRBV3S1A0A5B6 114 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 ERN1O75460 977 aaKnown RBP15.86■□□□□ 0.13
LDB3-208ENST00000623007 GMNNO75496 209 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 HOXC4P09017 264 aaPredicted RBP15.86■□□□□ 0.13
LDB3-208ENST00000623007 PRPS1L1P21108 318 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 ITPKAP23677 461 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 HTR1EP28566 365 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 SERPINB1P30740 379 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 SLC7A1P30825 629 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 ASMTP46597 345 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 C21orf58P58505 322 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 MS4A2Q01362 244 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 CTBSQ01459 385 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 WSCD2Q2TBF2 565 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 TIGD2Q4W5G0 525 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 SPIN4Q56A73 249 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 METRNLQ641Q3 311 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 LCN8Q6JVE9 175 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 MED27Q6P2C8 311 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 ZNF547Q8IVP9 402 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 LIX1Q8N485 282 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 HIPK4Q8NE63 616 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 ADCY4Q8NFM4 1077 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 OR2T34Q8NGX1 318 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 WDR20Q8TBZ3 569 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 PYCR2Q96C36 320 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 OR52A5Q9H2C5 316 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 ALG2Q9H553 416 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 CCDC177Q9NQR7 707 aaPredicted RBP15.86■□□□□ 0.13
LDB3-208ENST00000623007 INTS7Q9NVH2 962 aaKnown RBP15.86■□□□□ 0.13
LDB3-208ENST00000623007 FBXL12Q9NXK8 326 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 GULP1Q9UBP9 304 aa15.86■□□□□ 0.13
LDB3-208ENST00000623007 ZNHIT2Q9UHR6 403 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms