RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 CAND1Q86VP6 1230 aaKnown RBP7.03□□□□□ -1.28
COLCA1-205ENST00000620864 ARL14Q8N4G2 192 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 ZNF296Q8WUU4 475 aaPredicted RBP7.03□□□□□ -1.28
COLCA1-205ENST00000620864 BORCS7Q96B45 105 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 POTEKPQ9BYX7 375 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 TMX2Q9Y320 296 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 C1QTNF3-AMACRE9PGA6 284 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 SCN2BO60939 215 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 CSDE1O75534 798 aaKnown RBP7.03□□□□□ -1.28
COLCA1-205ENST00000620864 RPS3P23396 243 aaKnown RBP eCLIP7.03□□□□□ -1.28
COLCA1-205ENST00000620864 CERS1P27544 350 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 HNRNPH3P31942 346 aaKnown RBP7.03□□□□□ -1.28
COLCA1-205ENST00000620864 NRIP1P48552 1158 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 SULT2A1Q06520 285 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 ADGRD1Q6QNK2 874 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 TREML1Q86YW5 311 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 RASGEF1CQ8N431 466 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 FCAMRQ8WWV6 532 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 C5orf34Q96MH7 638 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 MCCC2Q9HCC0 563 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 GFOD1Q9NXC2 390 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 TAS2R8Q9NYW2 309 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 PTCH2Q9Y6C5 1203 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 TRAV19A0A0A6YYK7 116 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 C17orf113A0A1B0GUU1 675 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 H7C417 338 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 CXCR6O00574 342 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 FSCN2O14926 492 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 ZMPSTE24O75844 475 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 SCAF4O95104 1147 aaKnown RBP7.03□□□□□ -1.28
COLCA1-205ENST00000620864 GADD45GO95257 159 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 PAK4O96013 591 aaPredicted RBP7.03□□□□□ -1.28
COLCA1-205ENST00000620864 IL1BP01584 269 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 MAMLD1Q13495 774 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 CLCA4Q14CN2 919 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 RNASE12Q5GAN4 147 aaKnown RBP7.03□□□□□ -1.28
COLCA1-205ENST00000620864 NMUR2Q9GZQ4 415 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 EBF3Q9H4W6 596 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 TMEM45AQ9NWC5 275 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 FBXO5Q9UKT4 447 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 GAKO14976 1311 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 MYH6P13533 1939 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 FAM234BA2RU67 622 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 XPNPEP2O43895 674 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 ABCB7O75027 752 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 PTTG1O95997 202 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 MATN1P21941 496 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 LUMP51884 338 aaPredicted RBP7.03□□□□□ -1.28
COLCA1-205ENST00000620864 NDST1P52848 882 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 S100A10P60903 97 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 MEDAGQ5VYS4 303 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 FAM198BQ6UWH4 519 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 SLC26A9Q7LBE3 791 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 DNERQ8NFT8 737 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 SPATA20Q8TB22 786 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 SLC22A8Q8TCC7 542 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 ARL11Q969Q4 196 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 CPNE5Q9HCH3 593 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 ABI3Q9P2A4 366 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 PACSIN3Q9UKS6 424 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 EXOSC1Q9Y3B2 195 aaKnown RBP7.03□□□□□ -1.28
COLCA1-205ENST00000620864 MED31Q9Y3C7 131 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 GON4LQ3T8J9 2241 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 DUXAA6NLW8 204 aa7.02□□□□□ -1.28
COLCA1-205ENST00000620864 MAGEB17A8MXT2 336 aa7.02□□□□□ -1.28
COLCA1-205ENST00000620864 SEPT4O43236 478 aa7.02□□□□□ -1.28
COLCA1-205ENST00000620864 CRYZL1O95825 349 aa7.02□□□□□ -1.28
COLCA1-205ENST00000620864 SYPP08247 313 aa7.02□□□□□ -1.28
COLCA1-205ENST00000620864 ALPPL2P10696 532 aa7.02□□□□□ -1.28
COLCA1-205ENST00000620864 ETV6P41212 452 aa7.02□□□□□ -1.28
COLCA1-205ENST00000620864 RPL35P42766 123 aaKnown RBP7.02□□□□□ -1.28
COLCA1-205ENST00000620864 CLCN4P51793 760 aa7.02□□□□□ -1.28
COLCA1-205ENST00000620864 PPP5CP53041 499 aa7.02□□□□□ -1.28
COLCA1-205ENST00000620864 ABRAXAS2Q15018 415 aa7.02□□□□□ -1.28
COLCA1-205ENST00000620864 KANK2Q63ZY3 851 aa7.02□□□□□ -1.28
COLCA1-205ENST00000620864 TIGD3Q6B0B8 471 aa7.02□□□□□ -1.28
COLCA1-205ENST00000620864 SLC30A6Q6NXT4 461 aa7.02□□□□□ -1.28
COLCA1-205ENST00000620864 GRIN3AQ8TCU5 1115 aa7.02□□□□□ -1.28
COLCA1-205ENST00000620864 RTFDC1Q9BY42 306 aaPredicted RBP7.02□□□□□ -1.28
COLCA1-205ENST00000620864 KATNBL1Q9H079 304 aa7.02□□□□□ -1.28
COLCA1-205ENST00000620864 BTBD1Q9H0C5 482 aa7.02□□□□□ -1.28
COLCA1-205ENST00000620864 USP20Q9Y2K6 914 aa7.02□□□□□ -1.28
COLCA1-205ENST00000620864 MYH8P13535 1937 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 SSX5O60225 188 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 USP2O75604 605 aaPredicted RBP7.02□□□□□ -1.29
COLCA1-205ENST00000620864 OR2B3O76000 313 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 SLC2A5P22732 501 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 SPOCK1Q08629 439 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 NPTX1Q15818 432 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 DLK2Q6UY11 383 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 SLC30A10Q6XR72 485 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 SSX6Q7RTT6 188 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 ECHDC2Q86YB7 292 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 GPR135Q8IZ08 494 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 OR8K3Q8NH51 312 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 RPLP0P6Q8NHW5 317 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 TWIST2Q8WVJ9 160 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 GEMIN6Q8WXD5 167 aaKnown RBP7.02□□□□□ -1.29
COLCA1-205ENST00000620864 MOAP1Q96BY2 351 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 LINGO1Q96FE5 620 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms