RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 TRAF3Q13114 568 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 PLD1Q13393 1074 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 DGKKQ5KSL6 1271 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 CES5AQ6NT32 575 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 GPR153Q6NV75 609 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 B3GNT8Q7Z7M8 397 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 MFSD4AQ8N468 514 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 LINC01465Q8N7H1 131 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 UBASH3BQ8TF42 649 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 PTCD2Q8WV60 388 aaKnown RBP6.8□□□□□ -1.32
NEDD9-216ENST00000620854 PROX1Q92786 737 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 PYCR2Q96C36 320 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 CDKN2AIPNLQ96HQ2 116 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 TSGA13Q96PP4 275 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 OR52E6Q96RD3 313 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 NEK6Q9HC98 313 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 CLCA2Q9UQC9 943 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 PCDHGA10Q9Y5H3 936 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 A0A1W2PQH9 124 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 M0R129 80 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 STK25O00506 426 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 MUSKO15146 869 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 IRAK2O43187 625 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 NBNO60934 754 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 VIPP01282 170 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 FGBP02675 491 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 CYP11A1P05108 521 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 ALOX5P09917 674 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 LAG3P18627 525 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 PCMT1P22061 227 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 AZGP1P25311 298 aaKnown RBP6.8□□□□□ -1.32
NEDD9-216ENST00000620854 SOX6P35712 828 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 HK3P52790 923 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 AIF1P55008 147 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 MVKQ03426 396 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 PON2Q15165 354 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 CCBE1Q6UXH8 406 aaPredicted RBP6.8□□□□□ -1.32
NEDD9-216ENST00000620854 CEP68Q76N32 757 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 BEND5Q7L4P6 421 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 ARMCX6Q7L4S7 300 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 SPATA19Q7Z5L4 167 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 VTCN1Q7Z7D3 282 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 TRIM69Q86WT6 500 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 ADHFE1Q8IWW8 467 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 PIANPQ8IYJ0 282 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 SIX5Q8N196 739 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 SELENOMQ8WWX9 145 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 IMP4Q96G21 291 aaKnown RBP6.8□□□□□ -1.32
NEDD9-216ENST00000620854 HHIPL1Q96JK4 782 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 TSSK3Q96PN8 268 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 CHCHD6Q9BRQ6 235 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 PRRG3Q9BZD7 231 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 POLR1EQ9GZS1 481 aaKnown RBP6.8□□□□□ -1.32
NEDD9-216ENST00000620854 TNKS2Q9H2K2 1166 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 ERVK13-1Q9NX77 482 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 ARL15Q9NXU5 204 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 VNN3Q9NY84 501 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 SPG21Q9NZD8 308 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 OPTCQ9UBM4 332 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 PCDHGC4Q9Y5F7 938 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 POLR2AP24928 1970 aaKnown RBP6.8□□□□□ -1.32
NEDD9-216ENST00000620854 TRIP12Q14669 1992 aaPredicted RBP6.8□□□□□ -1.32
NEDD9-216ENST00000620854 AP3D1O14617 1153 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 PER2O15055 1255 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 SLC22A1O15245 554 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 TULP3O75386 442 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 SERPINI2O75830 405 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 KCNK2O95069 426 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 MED26O95402 600 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 GGT1P19440 569 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 ATP5C1P36542 298 aaKnown RBP6.8□□□□□ -1.32
NEDD9-216ENST00000620854 RPS7P62081 194 aaKnown RBP6.8□□□□□ -1.32
NEDD9-216ENST00000620854 PPP2R2BQ00005 443 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 SPANXN2Q5MJ10 180 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 SMYD5Q6GMV2 418 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 USP43Q70EL4 1123 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 BHLHA9Q7RTU4 235 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 SERINC5Q86VE9 423 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 ZFAND4Q86XD8 727 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 PGBD5Q8N414 524 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 RTL3Q8N8U3 475 aaKnown RBP6.8□□□□□ -1.32
NEDD9-216ENST00000620854 PAPD5Q8NDF8 572 aaKnown RBP6.8□□□□□ -1.32
NEDD9-216ENST00000620854 OR4F6Q8NGB9 312 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 RHOXF1Q8NHV9 184 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 KIAA1191Q96A73 305 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 PHF21AQ96BD5 680 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 Q96MT0 163 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 ASB2Q96Q27 587 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 KCNS3Q9BQ31 491 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 TRIM45Q9H8W5 580 aaPredicted RBP6.8□□□□□ -1.32
NEDD9-216ENST00000620854 PDP1Q9P0J1 537 aaPredicted RBP6.8□□□□□ -1.32
NEDD9-216ENST00000620854 TBC1D14Q9P2M4 693 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 ITGB1BP2Q9UKP3 347 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 TMEM98Q9Y2Y6 226 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 UGT2A1Q9Y4X1 527 aa6.8□□□□□ -1.32
NEDD9-216ENST00000620854 RLFQ13129 1914 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 MYADML2A6NDP7 307 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 TRIM64BA6NI03 449 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 PDZK1P1A8MUH7 402 aa6.79□□□□□ -1.32
NEDD9-216ENST00000620854 AIREO43918 545 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms