RNA–Protein interactions for RNA: ENST00000620463.1

COL1A2-213, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL1A2, Length 4,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-213ENST00000620463 PDZD9Q8IXQ8 264 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 DENND6BQ8NEG7 585 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 MAFIPQ8WZ33 124 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 C12orf66Q96MD2 445 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 SERPINB11Q96P15 392 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 NUDT15Q9NV35 164 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 EXTL2Q9UBQ6 330 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 KCNN3Q9UGI6 736 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 ZNF451Q9Y4E5 1061 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 CDC40O60508 579 aaKnown RBP eCLIP12.85□□□□□ -0.35
COL1A2-213ENST00000620463 DBPQ10586 325 aaPredicted RBP12.85□□□□□ -0.35
COL1A2-213ENST00000620463 CLVS2Q5SYC1 327 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 EEF1DP3Q658K8 133 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 SLC43A3Q8NBI5 491 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 ZNF304Q9HCX3 659 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 GPN3Q9UHW5 284 aaPredicted RBP12.85□□□□□ -0.35
COL1A2-213ENST00000620463 TLR4O00206 839 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 SLC28A2O43868 658 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 ETV1P50549 477 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 RPP38P78345 283 aaKnown RBP12.85□□□□□ -0.35
COL1A2-213ENST00000620463 APOFQ13790 326 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 SETMARQ53H47 684 aaPredicted RBP12.85□□□□□ -0.35
COL1A2-213ENST00000620463 FAM76BQ5HYJ3 339 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 CFAP77Q6ZQR2 320 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 TXNDC15Q96J42 360 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 ACO2Q99798 780 aaKnown RBP12.85□□□□□ -0.35
COL1A2-213ENST00000620463 A8MX80 341 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 CILPO75339 1184 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 FGF1P05230 155 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 RORAP35398 523 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 OR4D2P58180 307 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 OLIG2Q13516 323 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 TEAD4Q15561 434 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 FAM220AQ7Z4H9 259 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 NRARPQ7Z6K4 114 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 IFNL1Q8IU54 200 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 INO80EQ8NBZ0 244 aaPredicted RBP12.85□□□□□ -0.35
COL1A2-213ENST00000620463 OR2T35Q8NGX2 323 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 STOML3Q8TAV4 291 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 RFKQ969G6 155 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 TCEAL4Q96EI5 215 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 VMP1Q96GC9 406 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 CDK15Q96Q40 435 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 KCNA7Q96RP8 456 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 S100A13Q99584 98 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 TMED9Q9BVK6 235 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 TTLL2Q9BWV7 592 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 TNKS2Q9H2K2 1166 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 GLTPQ9NZD2 209 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 MAP4K5Q9Y4K4 846 aa12.85□□□□□ -0.35
COL1A2-213ENST00000620463 CROCCQ5TZA2 2017 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 CPSF4LA6NMK7 179 aaKnown RBP12.84□□□□□ -0.35
COL1A2-213ENST00000620463 SLC9A3R1O14745 358 aaPredicted RBP12.84□□□□□ -0.35
COL1A2-213ENST00000620463 SSX5O60225 188 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 LYPLA2O95372 231 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 TGFB3P10600 412 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 RIPPLY1Q0D2K3 151 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 ZBTB6Q15916 424 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 KHDRBS2Q5VWX1 349 aaKnown RBP12.84□□□□□ -0.35
COL1A2-213ENST00000620463 STEAP3Q658P3 488 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 KIAA0930Q6ICG6 404 aaPredicted RBP12.84□□□□□ -0.35
COL1A2-213ENST00000620463 APOBEC3HQ6NTF7 200 aaKnown RBP12.84□□□□□ -0.35
COL1A2-213ENST00000620463 MINDY1Q8N5J2 469 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 GDPD1Q8N9F7 314 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 HJURPQ8NCD3 748 aaPredicted RBP12.84□□□□□ -0.35
COL1A2-213ENST00000620463 RFT1Q96AA3 541 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 CIDECQ96AQ7 238 aaPredicted RBP12.84□□□□□ -0.35
COL1A2-213ENST00000620463 PPCDCQ96CD2 204 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 NEURL2Q9BR09 285 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 MTMR10Q9NXD2 777 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 MS4A12Q9NXJ0 267 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 GULP1Q9UBP9 304 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 SRRDQ9UH36 339 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 INTS6Q9UL03 887 aaKnown RBP12.84□□□□□ -0.35
COL1A2-213ENST00000620463 GPR182O15218 404 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 OPN1SWP03999 348 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 CD2P06729 351 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 SLURP2P0DP57 97 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 CKMT1AP12532 417 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 LPOP22079 712 aaPredicted RBP12.84□□□□□ -0.35
COL1A2-213ENST00000620463 HTR1EP28566 365 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 PKLRP30613 574 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 RYKP34925 604 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 PTPN9P43378 593 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 RHBDL3P58872 404 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 TSTD2Q5T7W7 516 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 ZNF367Q7RTV3 350 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 CHPFQ8IZ52 775 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 GPRC5AQ8NFJ5 357 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 HTATIP2Q9BUP3 242 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 IFT27Q9BW83 186 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 ZNF471Q9BX82 626 aaPredicted RBP12.84□□□□□ -0.35
COL1A2-213ENST00000620463 TM9SF3Q9HD45 589 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 PADI2Q9Y2J8 665 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 HLA-DPB1P04440 258 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 HSD17B1P14061 328 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 DDCP20711 480 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 GCAP28676 217 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 RPL3P39023 403 aaKnown RBP12.84□□□□□ -0.35
COL1A2-213ENST00000620463 ATP4BP51164 291 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms