RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 CD200R1Q8TD46 325 aa15.42■□□□□ 0.06
BRCA1-228ENST00000618469 MAGEC3Q8TD91 643 aa15.42■□□□□ 0.06
BRCA1-228ENST00000618469 N4BP2L2Q92802 583 aaPredicted RBP15.42■□□□□ 0.06
BRCA1-228ENST00000618469 ERP44Q9BS26 406 aa15.42■□□□□ 0.06
BRCA1-228ENST00000618469 TWSG1Q9GZX9 223 aa15.42■□□□□ 0.06
BRCA1-228ENST00000618469 LATS2Q9NRM7 1088 aa15.42■□□□□ 0.06
BRCA1-228ENST00000618469 SPATA7Q9P0W8 599 aa15.42■□□□□ 0.06
BRCA1-228ENST00000618469 CROTQ9UKG9 612 aa15.42■□□□□ 0.06
BRCA1-228ENST00000618469 RELNP78509 3460 aa15.42■□□□□ 0.06
BRCA1-228ENST00000618469 ZNF891A8MT65 544 aaPredicted RBP15.41■□□□□ 0.06
BRCA1-228ENST00000618469 MATN4O95460 622 aa15.41■□□□□ 0.06
BRCA1-228ENST00000618469 MT-ND3P03897 115 aa15.41■□□□□ 0.06
BRCA1-228ENST00000618469 CATP04040 527 aaKnown RBP15.41■□□□□ 0.06
BRCA1-228ENST00000618469 GP1BBP13224 206 aa15.41■□□□□ 0.06
BRCA1-228ENST00000618469 CYP2A7P20853 494 aa15.41■□□□□ 0.06
BRCA1-228ENST00000618469 MAGP20916 626 aa15.41■□□□□ 0.06
BRCA1-228ENST00000618469 CKAP4Q07065 602 aaKnown RBP15.41■□□□□ 0.06
BRCA1-228ENST00000618469 ZIC1Q15915 447 aa15.41■□□□□ 0.06
BRCA1-228ENST00000618469 RBM20Q5T481 1227 aaKnown RBP15.41■□□□□ 0.06
BRCA1-228ENST00000618469 PRAMEF17Q5VTA0 474 aa15.41■□□□□ 0.06
BRCA1-228ENST00000618469 KIAA0408Q6ZU52 694 aa15.41■□□□□ 0.06
BRCA1-228ENST00000618469 CPNE9Q8IYJ1 553 aa15.41■□□□□ 0.06
BRCA1-228ENST00000618469 ZBED8Q8IZ13 594 aa15.41■□□□□ 0.06
BRCA1-228ENST00000618469 FBXO36Q8NEA4 188 aa15.41■□□□□ 0.06
BRCA1-228ENST00000618469 STARD8Q92502 1023 aa15.41■□□□□ 0.06
BRCA1-228ENST00000618469 SLC45A3Q96JT2 553 aa15.41■□□□□ 0.06
BRCA1-228ENST00000618469 EFHD1Q9BUP0 239 aa15.41■□□□□ 0.06
BRCA1-228ENST00000618469 SLC25A18Q9H1K4 315 aa15.41■□□□□ 0.06
BRCA1-228ENST00000618469 EPN3Q9H201 632 aa15.41■□□□□ 0.06
BRCA1-228ENST00000618469 SYTL2Q9HCH5 934 aa15.41■□□□□ 0.06
BRCA1-228ENST00000618469 FAM60AQ9NP50 221 aa15.41■□□□□ 0.06
BRCA1-228ENST00000618469 LHX9Q9NQ69 397 aa15.41■□□□□ 0.06
BRCA1-228ENST00000618469 FAM114A2Q9NRY5 505 aa15.41■□□□□ 0.06
BRCA1-228ENST00000618469 TRMT6Q9UJA5 497 aaKnown RBP15.41■□□□□ 0.06
BRCA1-228ENST00000618469 KLHL20Q9Y2M5 609 aa15.41■□□□□ 0.06
BRCA1-228ENST00000618469 MRPS18BQ9Y676 258 aaKnown RBP15.41■□□□□ 0.06
BRCA1-228ENST00000618469 NBASA2RRP1 2371 aa15.41■□□□□ 0.06
BRCA1-228ENST00000618469 E7ESA3 106 aa15.4■□□□□ 0.06
BRCA1-228ENST00000618469 PSIP1O75475 530 aaKnown RBP15.4■□□□□ 0.06
BRCA1-228ENST00000618469 CCNYL3P0C7X3 344 aa15.4■□□□□ 0.06
BRCA1-228ENST00000618469 MSL3P1P0C860 447 aa15.4■□□□□ 0.06
BRCA1-228ENST00000618469 PRKAR1AP10644 381 aa15.4■□□□□ 0.06
BRCA1-228ENST00000618469 ENO3P13929 434 aaPredicted RBP15.4■□□□□ 0.06
BRCA1-228ENST00000618469 MCM3P25205 808 aa15.4■□□□□ 0.06
BRCA1-228ENST00000618469 PSMB5P28074 263 aa15.4■□□□□ 0.06
BRCA1-228ENST00000618469 GABRB3P28472 473 aa15.4■□□□□ 0.06
BRCA1-228ENST00000618469 ITGA1P56199 1179 aa15.4■□□□□ 0.06
BRCA1-228ENST00000618469 GPS2Q13227 327 aa15.4■□□□□ 0.06
BRCA1-228ENST00000618469 CAPN12Q6ZSI9 719 aa15.4■□□□□ 0.06
BRCA1-228ENST00000618469 NEK10Q6ZWH5 1172 aa15.4■□□□□ 0.06
BRCA1-228ENST00000618469 PIWIL4Q7Z3Z4 852 aaKnown RBP15.4■□□□□ 0.06
BRCA1-228ENST00000618469 DENND1AQ8TEH3 1009 aa15.4■□□□□ 0.06
BRCA1-228ENST00000618469 CT55Q8WUE5 264 aa15.4■□□□□ 0.06
BRCA1-228ENST00000618469 INPP5DQ92835 1189 aa15.4■□□□□ 0.06
BRCA1-228ENST00000618469 SLC22A18Q96BI1 424 aa15.4■□□□□ 0.06
BRCA1-228ENST00000618469 TCTN2Q96GX1 697 aa15.4■□□□□ 0.06
BRCA1-228ENST00000618469 SLC12A9Q9BXP2 914 aa15.4■□□□□ 0.06
BRCA1-228ENST00000618469 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.4■□□□□ 0.06
BRCA1-228ENST00000618469 WHRNQ9P202 907 aa15.4■□□□□ 0.06
BRCA1-228ENST00000618469 KLHL42Q9P2K6 505 aa15.4■□□□□ 0.06
BRCA1-228ENST00000618469 DHRS7Q9Y394 339 aa15.4■□□□□ 0.06
BRCA1-228ENST00000618469 PCDHB3Q9Y5E6 796 aa15.4■□□□□ 0.06
BRCA1-228ENST00000618469 TEX15Q9BXT5 2789 aa15.39■□□□□ 0.05
BRCA1-228ENST00000618469 E7EQ34 232 aa15.39■□□□□ 0.05
BRCA1-228ENST00000618469 URI1O94763 535 aaPredicted RBP15.39■□□□□ 0.05
BRCA1-228ENST00000618469 MPC1LP0DKB6 136 aa15.39■□□□□ 0.05
BRCA1-228ENST00000618469 F8A1P23610 371 aa15.39■□□□□ 0.05
BRCA1-228ENST00000618469 OAS2P29728 719 aaKnown RBP15.39■□□□□ 0.05
BRCA1-228ENST00000618469 CDC20Q12834 499 aa15.39■□□□□ 0.05
BRCA1-228ENST00000618469 DNASE1L3Q13609 305 aa15.39■□□□□ 0.05
BRCA1-228ENST00000618469 SF1Q15637 639 aaKnown RBP15.39■□□□□ 0.05
BRCA1-228ENST00000618469 TEDDM1Q5T9Z0 273 aa15.39■□□□□ 0.05
BRCA1-228ENST00000618469 ZNF572Q7Z3I7 529 aaPredicted RBP15.39■□□□□ 0.05
BRCA1-228ENST00000618469 GALNT7Q86SF2 657 aa15.39■□□□□ 0.05
BRCA1-228ENST00000618469 GPR135Q8IZ08 494 aa15.39■□□□□ 0.05
BRCA1-228ENST00000618469 GPATCH11Q8N954 259 aa15.39■□□□□ 0.05
BRCA1-228ENST00000618469 OR9A1PQ8NGU1 263 aa15.39■□□□□ 0.05
BRCA1-228ENST00000618469 ZNF592Q92610 1267 aa15.39■□□□□ 0.05
BRCA1-228ENST00000618469 CLIP3Q96DZ5 547 aa15.39■□□□□ 0.05
BRCA1-228ENST00000618469 SLC7A5P2Q9GIP4 190 aa15.39■□□□□ 0.05
BRCA1-228ENST00000618469 RAB17Q9H0T7 212 aa15.39■□□□□ 0.05
BRCA1-228ENST00000618469 ACTR5Q9H9F9 607 aaPredicted RBP15.39■□□□□ 0.05
BRCA1-228ENST00000618469 INTS7Q9NVH2 962 aaKnown RBP15.39■□□□□ 0.05
BRCA1-228ENST00000618469 IRAK4Q9NWZ3 460 aa15.39■□□□□ 0.05
BRCA1-228ENST00000618469 GRHL1Q9NZI5 618 aa15.39■□□□□ 0.05
BRCA1-228ENST00000618469 ZFATQ9P243 1243 aa15.39■□□□□ 0.05
BRCA1-228ENST00000618469 CDC23Q9UJX2 597 aa15.39■□□□□ 0.05
BRCA1-228ENST00000618469 PADI1Q9ULC6 663 aa15.39■□□□□ 0.05
BRCA1-228ENST00000618469 UTP11Q9Y3A2 253 aaKnown RBP15.39■□□□□ 0.05
BRCA1-228ENST00000618469 UTP20O75691 2785 aaKnown RBP15.38■□□□□ 0.05
BRCA1-228ENST00000618469 MYO1CO00159 1063 aa15.38■□□□□ 0.05
BRCA1-228ENST00000618469 HCRTR1O43613 425 aa15.38■□□□□ 0.05
BRCA1-228ENST00000618469 KATNA1O75449 491 aa15.38■□□□□ 0.05
BRCA1-228ENST00000618469 OR2B3O76000 313 aa15.38■□□□□ 0.05
BRCA1-228ENST00000618469 SYF2O95926 243 aaKnown RBP15.38■□□□□ 0.05
BRCA1-228ENST00000618469 AHSGP02765 367 aa15.38■□□□□ 0.05
BRCA1-228ENST00000618469 CBSLP0DN79 551 aa15.38■□□□□ 0.05
BRCA1-228ENST00000618469 TCN2P20062 427 aa15.38■□□□□ 0.05
BRCA1-228ENST00000618469 CBSP35520 551 aa15.38■□□□□ 0.05
BRCA1-228ENST00000618469 CDKN2DP55273 166 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms