RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 ILDR1Q86SU0 546 aaPredicted RBP10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 LNX2Q8N448 690 aa10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 NAT14Q8WUY8 206 aa10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 EURLQ9NYK6 297 aa10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 PCDHGC4Q9Y5F7 938 aa10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 SLC22A2O15244 555 aa10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 CSTF1Q05048 431 aaKnown RBP10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 SPIN3Q5JUX0 258 aa10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 C12orf40Q86WS4 652 aa10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 OR4K17Q8NGC6 315 aa10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 RPL10LQ96L21 214 aaKnown RBP10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 NUSAP1Q9BXS6 441 aaKnown RBP10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 CARS2Q9HA77 564 aaKnown RBP10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 ETAA1Q9NY74 926 aa10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 STOMP27105 288 aa10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 PIK3CBP42338 1070 aa10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 KLF10Q13118 480 aa10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 LRRTM4Q86VH4 590 aa10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 SLC25A36Q96CQ1 311 aa10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 CAPNS2Q96L46 248 aa10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 FZD10Q9ULW2 581 aa10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 C14orf166Q9Y224 244 aaKnown RBP10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 NUP205Q92621 2012 aa10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 CXCR6O00574 342 aa10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 PCDH7O60245 1069 aa10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 HSD3B2P26439 372 aa10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 ARL13AQ5H913 290 aaPredicted RBP10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 SSX6Q7RTT6 188 aa10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 VGLL2Q8N8G2 317 aa10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 OR7D4Q8NG98 312 aa10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 PSMG2Q969U7 264 aa10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 TTYH1Q9H313 450 aaPredicted RBP10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 EIF2B4Q9UI10 523 aaKnown RBP10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 ACSL1P33121 698 aa10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 MAGEA2P43356 314 aa10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 ARPC4P59998 168 aa10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 CRTC2Q53ET0 693 aaPredicted RBP10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 EEF1DP3Q658K8 133 aa10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 ZNF565Q8N9K5 539 aa10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 KIAA1143Q96AT1 154 aaPredicted RBP10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 GTPBP2Q9BX10 602 aaKnown RBP10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 OR2AG1Q9H205 316 aa10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 ANKRA2Q9H9E1 313 aa10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 PCDHB16Q9NRJ7 776 aa10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 INSL6Q9Y581 213 aa10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 IFNA21P01568 189 aa10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 CBSLP0DN79 551 aa10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 CBSP35520 551 aa10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 IQCCQ4KMZ1 466 aa10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 ARSIQ5FYB1 569 aa10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 TSTD2Q5T7W7 516 aa10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 FAM110BQ8TC76 370 aa10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 C7orf26Q96N11 449 aa10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 TMEM121BQ9BXQ6 578 aaPredicted RBP10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 CCDC86Q9H6F5 360 aaKnown RBP10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 SERTAD3Q9UJW9 196 aa10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 RPL36Q9Y3U8 105 aaKnown RBP10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 ITGA5P08648 1049 aa10.93□□□□□ -0.66
CCDC144B-208ENST00000618081 S100A2P29034 98 aa10.93□□□□□ -0.66
CCDC144B-208ENST00000618081 MRPL49Q13405 166 aaKnown RBP10.93□□□□□ -0.66
CCDC144B-208ENST00000618081 SIM2Q14190 667 aaPredicted RBP10.93□□□□□ -0.66
CCDC144B-208ENST00000618081 LINC00471Q8N535 108 aa10.93□□□□□ -0.66
CCDC144B-208ENST00000618081 NETO2Q8NC67 525 aa10.93□□□□□ -0.66
CCDC144B-208ENST00000618081 GEMIN6Q8WXD5 167 aaKnown RBP10.93□□□□□ -0.66
CCDC144B-208ENST00000618081 LPGAT1Q92604 370 aa10.93□□□□□ -0.66
CCDC144B-208ENST00000618081 HNRNPABQ99729 332 aaKnown RBP10.93□□□□□ -0.66
CCDC144B-208ENST00000618081 DUSP26Q9BV47 211 aa10.93□□□□□ -0.66
CCDC144B-208ENST00000618081 ASPNQ9BXN1 380 aa10.93□□□□□ -0.66
CCDC144B-208ENST00000618081 CPED1A4D0V7 1026 aa10.93□□□□□ -0.66
CCDC144B-208ENST00000618081 OR2AT4A6NND4 320 aa10.93□□□□□ -0.66
CCDC144B-208ENST00000618081 hCG_2039718K7EN88 272 aa10.93□□□□□ -0.66
CCDC144B-208ENST00000618081 SAP18O00422 153 aaKnown RBP10.93□□□□□ -0.66
CCDC144B-208ENST00000618081 PPEF2O14830 753 aa10.93□□□□□ -0.66
CCDC144B-208ENST00000618081 EDF1O60869 148 aaKnown RBP10.93□□□□□ -0.66
CCDC144B-208ENST00000618081 NMBRP28336 390 aa10.93□□□□□ -0.66
CCDC144B-208ENST00000618081 SLC1A2P43004 574 aa10.93□□□□□ -0.66
CCDC144B-208ENST00000618081 ROR2Q01974 943 aaKnown RBP10.93□□□□□ -0.66
CCDC144B-208ENST00000618081 FSTL1Q12841 308 aa10.93□□□□□ -0.66
CCDC144B-208ENST00000618081 ARHGAP40Q5TG30 622 aa10.93□□□□□ -0.66
CCDC144B-208ENST00000618081 EIF5AL1Q6IS14 154 aaKnown RBP10.93□□□□□ -0.66
CCDC144B-208ENST00000618081 CELF5Q8N6W0 485 aaKnown RBP10.93□□□□□ -0.66
CCDC144B-208ENST00000618081 DENND6BQ8NEG7 585 aa10.93□□□□□ -0.66
CCDC144B-208ENST00000618081 DKKL1Q9UK85 242 aa10.93□□□□□ -0.66
CCDC144B-208ENST00000618081 K7EPI3 171 aa10.93□□□□□ -0.66
CCDC144B-208ENST00000618081 ABLIM1O14639 778 aa10.93□□□□□ -0.66
CCDC144B-208ENST00000618081 GRK5P34947 590 aa10.93□□□□□ -0.66
CCDC144B-208ENST00000618081 DECR1Q16698 335 aa10.93□□□□□ -0.66
CCDC144B-208ENST00000618081 TREML1Q86YW5 311 aa10.93□□□□□ -0.66
CCDC144B-208ENST00000618081 UBE2J2Q8N2K1 259 aa10.93□□□□□ -0.66
CCDC144B-208ENST00000618081 CLIP4Q8N3C7 705 aa10.93□□□□□ -0.66
CCDC144B-208ENST00000618081 ZNF676Q8N7Q3 588 aa10.93□□□□□ -0.66
CCDC144B-208ENST00000618081 CITED4Q96RK1 184 aa10.93□□□□□ -0.66
CCDC144B-208ENST00000618081 SLC35A5Q9BS91 424 aa10.93□□□□□ -0.66
CCDC144B-208ENST00000618081 MAU2Q9Y6X3 613 aa10.93□□□□□ -0.66
CCDC144B-208ENST00000618081 NUP98P52948 1817 aa10.93□□□□□ -0.66
CCDC144B-208ENST00000618081 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.93□□□□□ -0.66
CCDC144B-208ENST00000618081 ACTR1BP42025 376 aa10.93□□□□□ -0.66
CCDC144B-208ENST00000618081 HNRNPDQ14103 355 aaKnown RBP10.93□□□□□ -0.66
CCDC144B-208ENST00000618081 MFSD5Q6N075 450 aa10.93□□□□□ -0.66
CCDC144B-208ENST00000618081 LRRC70Q7Z2Q7 622 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms