RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 CLCA2Q9UQC9 943 aa13.69□□□□□ -0.22
SSBP2-220ENST00000615665 RGPD3A6NKT7 1758 aaPredicted RBP13.69□□□□□ -0.22
SSBP2-220ENST00000615665 RGPD4Q7Z3J3 1758 aa13.69□□□□□ -0.22
SSBP2-220ENST00000615665 ARHGEF9O43307 516 aa13.69□□□□□ -0.22
SSBP2-220ENST00000615665 RPS3P23396 243 aaKnown RBP eCLIP13.69□□□□□ -0.22
SSBP2-220ENST00000615665 CD70P32970 193 aa13.69□□□□□ -0.22
SSBP2-220ENST00000615665 ABHD18Q0P651 414 aa13.69□□□□□ -0.22
SSBP2-220ENST00000615665 CASP12Q6UXS9 341 aa13.69□□□□□ -0.22
SSBP2-220ENST00000615665 RETREG3Q86VR2 466 aa13.69□□□□□ -0.22
SSBP2-220ENST00000615665 ZNF366Q8N895 744 aa13.69□□□□□ -0.22
SSBP2-220ENST00000615665 ZNF296Q8WUU4 475 aaPredicted RBP13.69□□□□□ -0.22
SSBP2-220ENST00000615665 SMG7Q92540 1137 aaKnown RBP13.69□□□□□ -0.22
SSBP2-220ENST00000615665 SMOXQ9NWM0 555 aa13.69□□□□□ -0.22
SSBP2-220ENST00000615665 IL36AQ9UHA7 158 aa13.69□□□□□ -0.22
SSBP2-220ENST00000615665 RAB23Q9ULC3 237 aa13.69□□□□□ -0.22
SSBP2-220ENST00000615665 SNAP29O95721 258 aa13.68□□□□□ -0.22
SSBP2-220ENST00000615665 KLKB1P03952 638 aa13.68□□□□□ -0.22
SSBP2-220ENST00000615665 BCKDHAP12694 445 aa13.68□□□□□ -0.22
SSBP2-220ENST00000615665 ENGP17813 658 aa13.68□□□□□ -0.22
SSBP2-220ENST00000615665 DEFA1P59665 94 aa13.68□□□□□ -0.22
SSBP2-220ENST00000615665 DEFA3P59666 94 aa13.68□□□□□ -0.22
SSBP2-220ENST00000615665 CDC42P60953 191 aa13.68□□□□□ -0.22
SSBP2-220ENST00000615665 CTSL3PQ5NE16 218 aa13.68□□□□□ -0.22
SSBP2-220ENST00000615665 THOC6Q86W42 341 aaKnown RBP13.68□□□□□ -0.22
SSBP2-220ENST00000615665 TMEM173Q86WV6 379 aaPredicted RBP13.68□□□□□ -0.22
SSBP2-220ENST00000615665 DEPDC4Q8N2C3 294 aa13.68□□□□□ -0.22
SSBP2-220ENST00000615665 SCAMP4Q969E2 229 aa13.68□□□□□ -0.22
SSBP2-220ENST00000615665 RBMX2Q9Y388 322 aaKnown RBP13.68□□□□□ -0.22
SSBP2-220ENST00000615665 TARM1B6A8C7 271 aa13.68□□□□□ -0.22
SSBP2-220ENST00000615665 RSL1D1O76021 490 aaKnown RBP13.68□□□□□ -0.22
SSBP2-220ENST00000615665 CDK9P50750 372 aaKnown RBP13.68□□□□□ -0.22
SSBP2-220ENST00000615665 CCR3P51677 355 aa13.68□□□□□ -0.22
SSBP2-220ENST00000615665 ALDH6A1Q02252 535 aaKnown RBP13.68□□□□□ -0.22
SSBP2-220ENST00000615665 TGM3Q08188 693 aa13.68□□□□□ -0.22
SSBP2-220ENST00000615665 CBX2Q14781 532 aaPredicted RBP13.68□□□□□ -0.22
SSBP2-220ENST00000615665 TEAD2Q15562 447 aa13.68□□□□□ -0.22
SSBP2-220ENST00000615665 ATP13A5Q4VNC0 1218 aa13.68□□□□□ -0.22
SSBP2-220ENST00000615665 PLEKHS1Q5SXH7 462 aa13.68□□□□□ -0.22
SSBP2-220ENST00000615665 FAM46CQ5VWP2 391 aa13.68□□□□□ -0.22
SSBP2-220ENST00000615665 TCEAL8Q8IYN2 117 aa13.68□□□□□ -0.22
SSBP2-220ENST00000615665 BORCS5Q969J3 196 aa13.68□□□□□ -0.22
SSBP2-220ENST00000615665 WNT6Q9Y6F9 365 aa13.68□□□□□ -0.22
SSBP2-220ENST00000615665 B4GALT3O60512 393 aa13.68□□□□□ -0.22
SSBP2-220ENST00000615665 MFN2O95140 757 aa13.68□□□□□ -0.22
SSBP2-220ENST00000615665 C7P10643 843 aa13.68□□□□□ -0.22
SSBP2-220ENST00000615665 CYP4F2P78329 520 aa13.68□□□□□ -0.22
SSBP2-220ENST00000615665 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.68□□□□□ -0.22
SSBP2-220ENST00000615665 NR1D2Q14995 579 aa13.68□□□□□ -0.22
SSBP2-220ENST00000615665 PHKG1Q16816 387 aa13.68□□□□□ -0.22
SSBP2-220ENST00000615665 LY6G5CQ5SRR4 150 aa13.68□□□□□ -0.22
SSBP2-220ENST00000615665 GCNT6Q5T4J0 391 aa13.68□□□□□ -0.22
SSBP2-220ENST00000615665 KRT73Q86Y46 540 aa13.68□□□□□ -0.22
SSBP2-220ENST00000615665 SPNS2Q8IVW8 549 aa13.68□□□□□ -0.22
SSBP2-220ENST00000615665 TRIM48Q8IWZ4 208 aa13.68□□□□□ -0.22
SSBP2-220ENST00000615665 LILRA2Q8N149 483 aa13.68□□□□□ -0.22
SSBP2-220ENST00000615665 MYDGFQ969H8 173 aa13.68□□□□□ -0.22
SSBP2-220ENST00000615665 AURKBQ96GD4 344 aaPredicted RBP13.68□□□□□ -0.22
SSBP2-220ENST00000615665 PHF12Q96QT6 1004 aa13.68□□□□□ -0.22
SSBP2-220ENST00000615665 OR2AG1Q9H205 316 aa13.68□□□□□ -0.22
SSBP2-220ENST00000615665 RAPGEFL1Q9UHV5 662 aa13.68□□□□□ -0.22
SSBP2-220ENST00000615665 KPNA4O00629 521 aaPredicted RBP13.68□□□□□ -0.22
SSBP2-220ENST00000615665 ACOT8O14734 319 aa13.68□□□□□ -0.22
SSBP2-220ENST00000615665 NFATC1O95644 943 aa13.68□□□□□ -0.22
SSBP2-220ENST00000615665 PDYNP01213 254 aa13.68□□□□□ -0.22
SSBP2-220ENST00000615665 GSTM1P09488 218 aa13.68□□□□□ -0.22
SSBP2-220ENST00000615665 DUOXA1Q1HG43 343 aa13.68□□□□□ -0.22
SSBP2-220ENST00000615665 RFTN2Q52LD8 501 aaPredicted RBP13.68□□□□□ -0.22
SSBP2-220ENST00000615665 TMC5Q6UXY8 1006 aa13.68□□□□□ -0.22
SSBP2-220ENST00000615665 EIF3MQ7L2H7 374 aaKnown RBP13.68□□□□□ -0.22
SSBP2-220ENST00000615665 TMCO2Q7Z6W1 182 aaPredicted RBP13.68□□□□□ -0.22
SSBP2-220ENST00000615665 RPF2Q9H7B2 306 aaKnown RBP13.68□□□□□ -0.22
SSBP2-220ENST00000615665 AASDHPPTQ9NRN7 309 aa13.68□□□□□ -0.22
SSBP2-220ENST00000615665 H2AFY2Q9P0M6 372 aaPredicted RBP13.68□□□□□ -0.22
SSBP2-220ENST00000615665 LHX3Q9UBR4 397 aa13.68□□□□□ -0.22
SSBP2-220ENST00000615665 PARP14Q460N5 1801 aa13.67□□□□□ -0.22
SSBP2-220ENST00000615665 PCDH7O60245 1069 aa13.67□□□□□ -0.22
SSBP2-220ENST00000615665 DDX6P26196 483 aaKnown RBP eCLIP13.67□□□□□ -0.22
SSBP2-220ENST00000615665 SGSHP51688 502 aa13.67□□□□□ -0.22
SSBP2-220ENST00000615665 HKDC1Q2TB90 917 aa13.67□□□□□ -0.22
SSBP2-220ENST00000615665 RBM48Q5RL73 367 aaKnown RBP13.67□□□□□ -0.22
SSBP2-220ENST00000615665 AGTRAPQ6RW13 159 aa13.67□□□□□ -0.22
SSBP2-220ENST00000615665 MTSS1LQ765P7 747 aa13.67□□□□□ -0.22
SSBP2-220ENST00000615665 C1orf52Q8N6N3 182 aaKnown RBP13.67□□□□□ -0.22
SSBP2-220ENST00000615665 OR10Q1Q8NGQ4 319 aa13.67□□□□□ -0.22
SSBP2-220ENST00000615665 FIBINQ8TAL6 211 aa13.67□□□□□ -0.22
SSBP2-220ENST00000615665 VPS35Q96QK1 796 aa13.67□□□□□ -0.22
SSBP2-220ENST00000615665 C6orf62Q9GZU0 229 aaPredicted RBP13.67□□□□□ -0.22
SSBP2-220ENST00000615665 SOX17Q9H6I2 414 aaPredicted RBP13.67□□□□□ -0.22
SSBP2-220ENST00000615665 SLCO3A1Q9UIG8 710 aa13.67□□□□□ -0.22
SSBP2-220ENST00000615665 CCNDBP1O95273 360 aa13.67□□□□□ -0.22
SSBP2-220ENST00000615665 NTSP30990 170 aa13.67□□□□□ -0.22
SSBP2-220ENST00000615665 PRKAG1P54619 331 aa13.67□□□□□ -0.22
SSBP2-220ENST00000615665 ACVR1Q04771 509 aa13.67□□□□□ -0.22
SSBP2-220ENST00000615665 TRAF3Q13114 568 aa13.67□□□□□ -0.22
SSBP2-220ENST00000615665 PTPRRQ15256 657 aa13.67□□□□□ -0.22
SSBP2-220ENST00000615665 ZC3H12BQ5HYM0 836 aaKnown RBP13.67□□□□□ -0.22
SSBP2-220ENST00000615665 CRTC1Q6UUV9 634 aa13.67□□□□□ -0.22
SSBP2-220ENST00000615665 RSPO2Q6UXX9 243 aaPredicted RBP13.67□□□□□ -0.22
SSBP2-220ENST00000615665 TTC29Q8NA56 475 aaPredicted RBP13.67□□□□□ -0.22
SSBP2-220ENST00000615665 TRMT2BQ96GJ1 504 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms