RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 LIPCP11150 499 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 NCF1P14598 390 aaPredicted RBP5.49□□□□□ -1.53
CPNE3-208ENST00000614678 IRF9Q00978 393 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 SYT16Q17RD7 645 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 HKDC1Q2TB90 917 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 HECTD2Q5U5R9 776 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 CCDC81Q6ZN84 652 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 PRSS58Q8IYP2 241 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 TBC1D21Q8IYX1 336 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 PDIK1LQ8N165 341 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 SH3KBP1Q96B97 665 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 ZDHHC12Q96GR4 267 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 MCMBPQ9BTE3 642 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 PITPNM3Q9BZ71 974 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 CHST8Q9H2A9 424 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 TFB2MQ9H5Q4 396 aaKnown RBP5.49□□□□□ -1.53
CPNE3-208ENST00000614678 UCK1Q9HA47 277 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 ZNF358Q9NW07 568 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 TAC3Q9UHF0 121 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 PDE10AQ9Y233 779 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 PCDHGA7Q9Y5G6 932 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 COLEC10Q9Y6Z7 277 aa5.49□□□□□ -1.53
CPNE3-208ENST00000614678 HECTD1Q9ULT8 2610 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 TLCD2A6NGC4 264 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 SCRG1O75711 98 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 RPS3P23396 243 aaKnown RBP eCLIP5.48□□□□□ -1.534e-6■■■■■ 32.6
CPNE3-208ENST00000614678 IMPA1P29218 277 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 HSD11B2P80365 405 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 SF1Q15637 639 aaKnown RBP5.48□□□□□ -1.53
CPNE3-208ENST00000614678 CPZQ66K79 652 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 C3orf62Q6ZUJ4 267 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 PRSS42Q7Z5A4 293 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 SDCCAG8Q86SQ7 713 aaPredicted RBP5.48□□□□□ -1.53
CPNE3-208ENST00000614678 ZC3HC1Q86WB0 502 aaKnown RBP5.48□□□□□ -1.53
CPNE3-208ENST00000614678 LRRC56Q8IYG6 542 aaPredicted RBP5.48□□□□□ -1.53
CPNE3-208ENST00000614678 CT55Q8WUE5 264 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.48□□□□□ -1.53
CPNE3-208ENST00000614678 LINGO1Q96FE5 620 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 EPHA6Q9UF33 1036 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 ADGRG4Q8IZF6 3080 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 NPEPPSL1A6NEC2 478 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 CCDC188H7C350 402 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 K7ENP7 123 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 P2RX6O15547 441 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 PDGFAP04085 211 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 EIF2S1P05198 315 aaKnown RBP5.48□□□□□ -1.53
CPNE3-208ENST00000614678 CAPN1P07384 714 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 SLC2A4P14672 509 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 TCN2P20062 427 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 DLSTP36957 453 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 OR1D4P47884 311 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 RAB28P51157 221 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 SARNPP82979 210 aaKnown RBP5.48□□□□□ -1.53
CPNE3-208ENST00000614678 STEAP4Q687X5 459 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 INO80CQ6PI98 192 aaPredicted RBP5.48□□□□□ -1.53
CPNE3-208ENST00000614678 C4orf22Q6V702 233 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 HOOK3Q86VS8 718 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 PPP1R3BQ86XI6 285 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 C19orf47Q8N9M1 422 aaKnown RBP5.48□□□□□ -1.53
CPNE3-208ENST00000614678 FBF1Q8TES7 1133 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 ASB11Q8WXH4 323 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 PEX13Q92968 403 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 OR4K3Q96R72 315 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 FBXO8Q9NRD0 319 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 INTS7Q9NVH2 962 aaKnown RBP5.48□□□□□ -1.53
CPNE3-208ENST00000614678 DHRS7Q9Y394 339 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 TMEM8BA6NDV4 472 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 LRRC14BA6NHZ5 514 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 E7ENX8 843 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 H7BY64 318 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 TERTO14746 1132 aaKnown RBP5.48□□□□□ -1.53
CPNE3-208ENST00000614678 ZBTB11O95625 1053 aaPredicted RBP5.48□□□□□ -1.53
CPNE3-208ENST00000614678 ESR1P03372 595 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 ANKRD34CP0C6C1 535 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 OGNP20774 298 aaKnown RBP5.48□□□□□ -1.53
CPNE3-208ENST00000614678 ARL4CP56559 192 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 TAP2Q03519 686 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 RPA4Q13156 261 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 PLEKHS1Q5SXH7 462 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 FBXO42Q6P3S6 717 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 LRRC69Q6ZNQ3 347 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 RPS27LQ71UM5 84 aaKnown RBP5.48□□□□□ -1.53
CPNE3-208ENST00000614678 TMEM126BQ8IUX1 230 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 RNF175Q8N4F7 328 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 WDR48Q8TAF3 677 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 TTC9Q92623 222 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 PRAP1Q96NZ9 151 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 SLC12A9Q9BXP2 914 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 ZNF71Q9NQZ8 489 aaPredicted RBP5.48□□□□□ -1.53
CPNE3-208ENST00000614678 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.48□□□□□ -1.53
CPNE3-208ENST00000614678 SEMA5BQ9P283 1151 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 PRDM4Q9UKN5 801 aa5.48□□□□□ -1.53
CPNE3-208ENST00000614678 USP9XQ93008 2570 aaPredicted RBP5.48□□□□□ -1.53
CPNE3-208ENST00000614678 LCMT2O60294 686 aaKnown RBP5.47□□□□□ -1.53
CPNE3-208ENST00000614678 PRAMEF4O60810 478 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 PSIP1O75475 530 aaKnown RBP5.47□□□□□ -1.53
CPNE3-208ENST00000614678 JRKO75564 520 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 ACSL3O95573 720 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 MLLT3P42568 568 aaPredicted RBP5.47□□□□□ -1.53
CPNE3-208ENST00000614678 CD151P48509 253 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms