RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 PPFIBP2Q8ND30 876 aa14.23□□□□□ -0.13
CD48-203ENST00000613788 BAHD1Q8TBE0 780 aaPredicted RBP14.23□□□□□ -0.13
CD48-203ENST00000613788 MED8Q96G25 268 aa14.23□□□□□ -0.13
CD48-203ENST00000613788 CCDC3Q9BQI4 270 aa14.23□□□□□ -0.13
CD48-203ENST00000613788 CD244Q9BZW8 370 aa14.23□□□□□ -0.13
CD48-203ENST00000613788 PCBD2Q9H0N5 130 aa14.23□□□□□ -0.13
CD48-203ENST00000613788 SLC32A1Q9H598 525 aa14.23□□□□□ -0.13
CD48-203ENST00000613788 CCDC177Q9NQR7 707 aaPredicted RBP14.23□□□□□ -0.13
CD48-203ENST00000613788 OXSMQ9NWU1 459 aa14.23□□□□□ -0.13
CD48-203ENST00000613788 IGHV1OR21-1A0A087WYE8 117 aa14.22□□□□□ -0.13
CD48-203ENST00000613788 OR5K3A6NET4 321 aa14.22□□□□□ -0.13
CD48-203ENST00000613788 C2orf74A8MZ97 194 aa14.22□□□□□ -0.13
CD48-203ENST00000613788 H3BQF6 201 aa14.22□□□□□ -0.13
CD48-203ENST00000613788 BTN3A3O00478 584 aa14.22□□□□□ -0.13
CD48-203ENST00000613788 BIRC5O15392 142 aa14.22□□□□□ -0.13
CD48-203ENST00000613788 B4GAT1O43505 415 aa14.22□□□□□ -0.13
CD48-203ENST00000613788 DUX1O43812 170 aa14.22□□□□□ -0.13
CD48-203ENST00000613788 BPGMP07738 259 aa14.22□□□□□ -0.13
CD48-203ENST00000613788 CHRM5P08912 532 aaPredicted RBP14.22□□□□□ -0.13
CD48-203ENST00000613788 DHRS4L1P0CG22 281 aa14.22□□□□□ -0.13
CD48-203ENST00000613788 TYRP1P17643 537 aa14.22□□□□□ -0.13
CD48-203ENST00000613788 POLR2CP19387 275 aaPredicted RBP14.22□□□□□ -0.13
CD48-203ENST00000613788 IMPDH1P20839 514 aa14.22□□□□□ -0.13
CD48-203ENST00000613788 KCNA4P22459 653 aa14.22□□□□□ -0.13
CD48-203ENST00000613788 SLC6A12P48065 614 aa14.22□□□□□ -0.13
CD48-203ENST00000613788 SERPINB4P48594 390 aa14.22□□□□□ -0.13
CD48-203ENST00000613788 HSPA7P48741 367 aa14.22□□□□□ -0.13
CD48-203ENST00000613788 PRKAA2P54646 552 aa14.22□□□□□ -0.13
CD48-203ENST00000613788 DNAJB13P59910 316 aa14.22□□□□□ -0.13
CD48-203ENST00000613788 NAA20P61599 178 aa14.22□□□□□ -0.13
CD48-203ENST00000613788 TSTA3Q13630 321 aaPredicted RBP14.22□□□□□ -0.13
CD48-203ENST00000613788 FASTKQ14296 549 aaKnown RBP14.22□□□□□ -0.13
CD48-203ENST00000613788 PCLAFQ15004 111 aa14.22□□□□□ -0.13
CD48-203ENST00000613788 PCBP2Q15366 365 aaKnown RBP eCLIP14.22□□□□□ -0.13
CD48-203ENST00000613788 PERM1Q5SV97 790 aa14.22□□□□□ -0.13
CD48-203ENST00000613788 THEMIS2Q5TEJ8 643 aa14.22□□□□□ -0.13
CD48-203ENST00000613788 SPRED1Q7Z699 444 aa14.22□□□□□ -0.13
CD48-203ENST00000613788 LRRC56Q8IYG6 542 aaPredicted RBP14.22□□□□□ -0.13
CD48-203ENST00000613788 MGARPQ8TDB4 240 aa14.22□□□□□ -0.13
CD48-203ENST00000613788 UBTD2Q8WUN7 234 aa14.22□□□□□ -0.13
CD48-203ENST00000613788 NRTNQ99748 197 aa14.22□□□□□ -0.13
CD48-203ENST00000613788 MIPEPQ99797 713 aa14.22□□□□□ -0.13
CD48-203ENST00000613788 PAIP2Q9BPZ3 127 aaKnown RBP14.22□□□□□ -0.13
CD48-203ENST00000613788 PCDHB11Q9Y5F2 797 aa14.22□□□□□ -0.13
CD48-203ENST00000613788 ARID1BQ8NFD5 2236 aaPredicted RBP14.22□□□□□ -0.13
CD48-203ENST00000613788 ISM1B1AKI9 464 aa14.21□□□□□ -0.13
CD48-203ENST00000613788 CCNT2O60583 730 aaKnown RBP14.21□□□□□ -0.13
CD48-203ENST00000613788 TRIM13O60858 407 aa14.21□□□□□ -0.13
CD48-203ENST00000613788 WDR47O94967 919 aa14.21□□□□□ -0.13
CD48-203ENST00000613788 NEFHP12036 1026 aa14.21□□□□□ -0.13
CD48-203ENST00000613788 EEF1DP29692 281 aaKnown RBP14.21□□□□□ -0.13
CD48-203ENST00000613788 OAS2P29728 719 aaKnown RBP14.21□□□□□ -0.13
CD48-203ENST00000613788 ALDH3A1P30838 453 aa14.21□□□□□ -0.13
CD48-203ENST00000613788 GDF5P43026 501 aa14.21□□□□□ -0.13
CD48-203ENST00000613788 CAPZBP47756 277 aa14.21□□□□□ -0.13
CD48-203ENST00000613788 TBPL1P62380 186 aa14.21□□□□□ -0.13
CD48-203ENST00000613788 HERVK_113P63132 956 aa14.21□□□□□ -0.13
CD48-203ENST00000613788 SQSTM1Q13501 440 aa14.21□□□□□ -0.13
CD48-203ENST00000613788 ZXDCQ2QGD7 858 aaPredicted RBP14.21□□□□□ -0.13
CD48-203ENST00000613788 C18orf21Q32NC0 220 aaPredicted RBP14.21□□□□□ -0.13
CD48-203ENST00000613788 AMZ1Q400G9 498 aa14.21□□□□□ -0.13
CD48-203ENST00000613788 FBXO48Q5FWF7 155 aa14.21□□□□□ -0.13
CD48-203ENST00000613788 LIPMQ5VYY2 423 aa14.21□□□□□ -0.13
CD48-203ENST00000613788 SUSD1Q6UWL2 747 aa14.21□□□□□ -0.13
CD48-203ENST00000613788 NUDCD3Q8IVD9 361 aa14.21□□□□□ -0.13
CD48-203ENST00000613788 C10orf107Q8IVU9 208 aa14.21□□□□□ -0.13
CD48-203ENST00000613788 KLHDC8AQ8IYD2 350 aa14.21□□□□□ -0.13
CD48-203ENST00000613788 NCSTNQ92542 709 aa14.21□□□□□ -0.13
CD48-203ENST00000613788 RSC1A1Q92681 617 aa14.21□□□□□ -0.13
CD48-203ENST00000613788 ESAMQ96AP7 390 aa14.21□□□□□ -0.13
CD48-203ENST00000613788 PYCR2Q96C36 320 aa14.21□□□□□ -0.13
CD48-203ENST00000613788 TMEM79Q9BSE2 394 aa14.21□□□□□ -0.13
CD48-203ENST00000613788 HAUS8Q9BT25 410 aa14.21□□□□□ -0.13
CD48-203ENST00000613788 SGPP1Q9BX95 441 aa14.21□□□□□ -0.13
CD48-203ENST00000613788 ERVK-6Q9BXR3 956 aa14.21□□□□□ -0.13
CD48-203ENST00000613788 CAPS2Q9BXY5 557 aa14.21□□□□□ -0.13
CD48-203ENST00000613788 RAB33BQ9H082 229 aa14.21□□□□□ -0.13
CD48-203ENST00000613788 INTS7Q9NVH2 962 aaKnown RBP14.21□□□□□ -0.13
CD48-203ENST00000613788 OPTCQ9UBM4 332 aa14.21□□□□□ -0.13
CD48-203ENST00000613788 SLC22A14Q9Y267 594 aa14.21□□□□□ -0.13
CD48-203ENST00000613788 ZFHX2Q9C0A1 2572 aaPredicted RBP14.21□□□□□ -0.13
CD48-203ENST00000613788 COL5A1P20908 1838 aaPredicted RBP14.21□□□□□ -0.13
CD48-203ENST00000613788 GSAPA4D1B5 854 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 K7EPI3 171 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 SIX3O95343 332 aaPredicted RBP14.2□□□□□ -0.14
CD48-203ENST00000613788 CD1CP29017 333 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 PIK3CGP48736 1102 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 AGTR2P50052 363 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 WDR4P57081 412 aaKnown RBP14.2□□□□□ -0.14
CD48-203ENST00000613788 ILKQ13418 452 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 SF1Q15637 639 aaKnown RBP14.2□□□□□ -0.14
CD48-203ENST00000613788 TRIP6Q15654 476 aaKnown RBP14.2□□□□□ -0.14
CD48-203ENST00000613788 CLPPQ16740 277 aaPredicted RBP14.2□□□□□ -0.14
CD48-203ENST00000613788 ZNF678Q5SXM1 525 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 PRAMEF13Q5VWM6 474 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 LCTLQ6UWM7 567 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 LRRC70Q7Z2Q7 622 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 TAX1BP1Q86VP1 789 aa14.2□□□□□ -0.14
CD48-203ENST00000613788 THOC6Q86W42 341 aaKnown RBP14.2□□□□□ -0.14
CD48-203ENST00000613788 PLXDC1Q8IUK5 500 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms