RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 HLA-DQA1Q5Y7H0 255 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 OR10H4Q8NGA5 316 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 SLC7A13Q8TCU3 470 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 SLC29A3Q9BZD2 475 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 OR51B5Q9H339 312 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.6□□□□□ -1.03
TTC28-208ENST00000612946 F8W036 122 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 C2P06681 752 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 CD247P20963 164 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 GADD45AP24522 165 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 MMP12P39900 470 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 ZNF614Q8N883 585 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 TXNDC5Q8NBS9 432 aaKnown RBP8.6□□□□□ -1.03
TTC28-208ENST00000612946 OR2M2Q96R28 347 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 B3GNT2Q9NY97 397 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 FLRT1Q9NZU1 646 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 BCS1LQ9Y276 419 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 NOP16Q9Y3C1 178 aaKnown RBP8.6□□□□□ -1.03
TTC28-208ENST00000612946 ARHGAP11AQ6P4F7 1023 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 ABHD11Q8NFV4 315 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 C7orf43Q8WVR3 580 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 SGTBQ96EQ0 304 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 OR14A2Q96R54 314 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 SULT4A1Q9BR01 284 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 GBA3Q9H227 469 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 PPIL3Q9H2H8 161 aaKnown RBP8.6□□□□□ -1.03
TTC28-208ENST00000612946 LYARQ9NX58 379 aaKnown RBP8.6□□□□□ -1.03
TTC28-208ENST00000612946 IRF6O14896 467 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 FMO1Q01740 532 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 CLPPQ16740 277 aaPredicted RBP8.6□□□□□ -1.03
TTC28-208ENST00000612946 FAM131BQ86XD5 332 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 CNOT9Q92600 299 aaKnown RBP8.6□□□□□ -1.03
TTC28-208ENST00000612946 TRIM43Q96BQ3 446 aaPredicted RBP8.6□□□□□ -1.03
TTC28-208ENST00000612946 ZNF700Q9H0M5 742 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 ZFP14Q9HCL3 533 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 GLYATL1P3A0A0U1RQE8 302 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 AGAP14A8MT82 685 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 SLC25A12O75746 678 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 KCNA5P22460 613 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 GRIK2Q13002 908 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 SEC23AQ15436 765 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 SLC2A7Q6PXP3 512 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 GATA6Q92908 595 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 LGALS12Q96DT0 336 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 OR4K3Q96R72 315 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 MMP19Q99542 508 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 WACQ9BTA9 647 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 OPA3Q9H6K4 179 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 RNF121Q9H920 327 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 KCNK13Q9HB14 408 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 HACL1Q9UJ83 578 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 DAPL1A0PJW8 107 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 CNTN5O94779 1100 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 MT-ND1P03886 318 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 ELAVL2Q12926 359 aaKnown RBP8.6□□□□□ -1.03
TTC28-208ENST00000612946 DENND1AQ8TEH3 1009 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 PKP2Q99959 881 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 TMEM27Q9HBJ8 222 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 SOBPA7XYQ1 873 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 MAP3K6O95382 1288 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 NAT1P18440 290 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 OR3A3P47888 321 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 OR3A2P47893 321 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 CDH12P55289 794 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 GAD2Q05329 585 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 AP5B1Q2VPB7 878 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 PSD4Q8NDX1 1056 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 OR2L3Q8NG85 312 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 GAB3Q8WWW8 586 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 IRS2Q9Y4H2 1338 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 A0A1W2PPM1 405 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 APBA3O96018 575 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 MARCKSL1P49006 195 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 SPOCK1Q08629 439 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 GNMTQ14749 295 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 ZNF598Q86UK7 904 aaKnown RBP8.6□□□□□ -1.03
TTC28-208ENST00000612946 OR10G2Q8NGC3 310 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 BRD7Q9NPI1 651 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 WASH6PQ9NQA3 447 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 AGLP35573 1532 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 TARBP1Q13395 1621 aaKnown RBP8.59□□□□□ -1.03
TTC28-208ENST00000612946 CDC7O00311 574 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 CYB5AP00167 134 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 RPL35P42766 123 aaKnown RBP8.59□□□□□ -1.03
TTC28-208ENST00000612946 RAP2BP61225 183 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 PPP3CAQ08209 521 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 XKR4Q5GH76 650 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 FBXO47Q5MNV8 452 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 ING5Q8WYH8 240 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 TNFRSF25Q93038 417 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 MALSU1Q96EH3 234 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 C16orf58Q96GQ5 468 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 A0A0G2JMP0 313 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 F5H0A9 414 aaPredicted RBP8.59□□□□□ -1.03
TTC28-208ENST00000612946 AIPO00170 330 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 SC5DO75845 299 aa8.59□□□□□ -1.03
TTC28-208ENST00000612946 DLDP09622 509 aaKnown RBP8.59□□□□□ -1.03
TTC28-208ENST00000612946 MYCLP1P12525 358 aaPredicted RBP8.59□□□□□ -1.03
TTC28-208ENST00000612946 TPT1P13693 172 aaKnown RBP8.59□□□□□ -1.03
TTC28-208ENST00000612946 POLR2CP19387 275 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms