RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 ACTR8Q9H981 624 aa8.66□□□□□ -1.02
CCDC47-207ENST00000612558 FZD3Q9NPG1 666 aa8.66□□□□□ -1.02
CCDC47-207ENST00000612558 CD93Q9NPY3 652 aa8.66□□□□□ -1.02
CCDC47-207ENST00000612558 ACSL5Q9ULC5 683 aa8.66□□□□□ -1.02
CCDC47-207ENST00000612558 RNF11Q9Y3C5 154 aa8.66□□□□□ -1.02
CCDC47-207ENST00000612558 KANSL1LA0AUZ9 987 aa8.65□□□□□ -1.02
CCDC47-207ENST00000612558 KRT87PA6NCN2 255 aa8.65□□□□□ -1.02
CCDC47-207ENST00000612558 MSTNO14793 375 aa8.65□□□□□ -1.02
CCDC47-207ENST00000612558 GSC2O15499 205 aa8.65□□□□□ -1.02
CCDC47-207ENST00000612558 LATO43561 262 aa8.65□□□□□ -1.02
CCDC47-207ENST00000612558 UGDHO60701 494 aa8.65□□□□□ -1.02
CCDC47-207ENST00000612558 ULK1O75385 1050 aa8.65□□□□□ -1.02
CCDC47-207ENST00000612558 SEMA4FO95754 770 aa8.65□□□□□ -1.02
CCDC47-207ENST00000612558 SLC16A8O95907 504 aa8.65□□□□□ -1.02
CCDC47-207ENST00000612558 FUCA1P04066 466 aa8.65□□□□□ -1.02
CCDC47-207ENST00000612558 RPN2P04844 631 aa8.65□□□□□ -1.02
CCDC47-207ENST00000612558 KRT16P08779 473 aa8.65□□□□□ -1.02
CCDC47-207ENST00000612558 PRR35P0CG20 571 aa8.65□□□□□ -1.02
CCDC47-207ENST00000612558 EPORP19235 508 aa8.65□□□□□ -1.02
CCDC47-207ENST00000612558 KELP23276 732 aa8.65□□□□□ -1.02
CCDC47-207ENST00000612558 IMPA1P29218 277 aa8.65□□□□□ -1.02
CCDC47-207ENST00000612558 MXRA7P84157 204 aa8.65□□□□□ -1.02
CCDC47-207ENST00000612558 PCDH1Q08174 1060 aa8.65□□□□□ -1.02
CCDC47-207ENST00000612558 NAE1Q13564 534 aa8.65□□□□□ -1.02
CCDC47-207ENST00000612558 GSTA3Q16772 222 aa8.65□□□□□ -1.02
CCDC47-207ENST00000612558 PYCR3Q53H96 274 aa8.65□□□□□ -1.02
CCDC47-207ENST00000612558 TCHHL1Q5QJ38 904 aaPredicted RBP8.65□□□□□ -1.02
CCDC47-207ENST00000612558 SCIMPQ6UWF3 145 aa8.65□□□□□ -1.02
CCDC47-207ENST00000612558 Q6ZSR9 355 aa8.65□□□□□ -1.02
CCDC47-207ENST00000612558 CHST15Q7LFX5 561 aaPredicted RBP8.65□□□□□ -1.02
CCDC47-207ENST00000612558 THOC6Q86W42 341 aaKnown RBP8.65□□□□□ -1.02
CCDC47-207ENST00000612558 LONP2Q86WA8 852 aa8.65□□□□□ -1.02
CCDC47-207ENST00000612558 GALNT13Q8IUC8 556 aa8.65□□□□□ -1.02
CCDC47-207ENST00000612558 C10orf67Q8IYJ2 551 aa8.65□□□□□ -1.02
CCDC47-207ENST00000612558 L3MBTL4Q8NA19 623 aa8.65□□□□□ -1.02
CCDC47-207ENST00000612558 RBM15BQ8NDT2 890 aaKnown RBP8.65□□□□□ -1.02
CCDC47-207ENST00000612558 TSTD1Q8NFU3 115 aa8.65□□□□□ -1.02
CCDC47-207ENST00000612558 TFGQ92734 400 aaPredicted RBP8.65□□□□□ -1.02
CCDC47-207ENST00000612558 MIPEPQ99797 713 aa8.65□□□□□ -1.02
CCDC47-207ENST00000612558 RTKNQ9BST9 563 aa8.65□□□□□ -1.02
CCDC47-207ENST00000612558 CADM1Q9BY67 442 aaKnown RBP8.65□□□□□ -1.02
CCDC47-207ENST00000612558 MMADHCQ9H3L0 296 aaPredicted RBP8.65□□□□□ -1.02
CCDC47-207ENST00000612558 SLC40A1Q9NP59 571 aa8.65□□□□□ -1.02
CCDC47-207ENST00000612558 TM7SF3Q9NS93 570 aa8.65□□□□□ -1.02
CCDC47-207ENST00000612558 INTS7Q9NVH2 962 aaKnown RBP8.65□□□□□ -1.02
CCDC47-207ENST00000612558 FBXL21Q9UKT6 434 aa8.65□□□□□ -1.02
CCDC47-207ENST00000612558 ASF1AQ9Y294 204 aa8.65□□□□□ -1.02
CCDC47-207ENST00000612558 HS3ST3A1Q9Y663 406 aa8.65□□□□□ -1.02
CCDC47-207ENST00000612558 KRBA1A5PL33 1030 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 POM121BA6NF01 834 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 FAM170BA6NMN3 283 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 C10orf142B7Z368 130 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 PSMD12O00232 456 aaPredicted RBP8.65□□□□□ -1.03
CCDC47-207ENST00000612558 SLC28A1O00337 649 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 IFRD1O00458 451 aaPredicted RBP8.65□□□□□ -1.03
CCDC47-207ENST00000612558 MANBAO00462 879 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 TOR1BO14657 336 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 RGS14O43566 566 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 PEX11AO75192 247 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 RASSF9O75901 435 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 APBB3O95704 486 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 KRT6AP02538 564 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 KRT6BP04259 564 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 ALDOCP09972 364 aaKnown RBP8.65□□□□□ -1.03
CCDC47-207ENST00000612558 ACP5P13686 325 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 IDO1P14902 403 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 ITPKAP23677 461 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 HTR1BP28222 390 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 OXTRP30559 389 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 AKT2P31751 481 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 KRT6CP48668 564 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 ACADVLP49748 655 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 HTR6P50406 440 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 CCR5P51681 352 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 CLDN2P57739 230 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 ERVK-8P63133 956 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 ELF3P78545 371 aaPredicted RBP8.65□□□□□ -1.03
CCDC47-207ENST00000612558 ZP2Q05996 745 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 GRIK2Q13002 908 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 FZD5Q13467 585 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 PTK2BQ14289 1009 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 FASTKQ14296 549 aaKnown RBP8.65□□□□□ -1.03
CCDC47-207ENST00000612558 GRB7Q14451 532 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 UBXN2BQ14CS0 331 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 ABRAXAS2Q15018 415 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 MAPRE2Q15555 327 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 ZRSR2Q15696 482 aaKnown RBP8.65□□□□□ -1.03
CCDC47-207ENST00000612558 DNAL1Q4LDG9 190 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 ATP6AP1LQ52LC2 224 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 LIPJQ5W064 366 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 CAPRIN2Q6IMN6 1127 aaKnown RBP8.65□□□□□ -1.03
CCDC47-207ENST00000612558 ANO7Q6IWH7 933 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 CAPN13Q6MZZ7 669 aaPredicted RBP8.65□□□□□ -1.03
CCDC47-207ENST00000612558 SNX32Q86XE0 403 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 MYLK4Q86YV6 388 aaPredicted RBP8.65□□□□□ -1.03
CCDC47-207ENST00000612558 DCUN1D3Q8IWE4 304 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 SYTL1Q8IYJ3 562 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 ARHGAP24Q8N264 748 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 MIER2Q8N344 545 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 OR2T11Q8NH01 316 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms