RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 SERINC5Q86VE9 423 aa19.91■□□□□ 0.78
SSBP3-216ENST00000610401 PYURFQ96I23 114 aa19.91■□□□□ 0.78
SSBP3-216ENST00000610401 PANX1Q96RD7 426 aa19.91■□□□□ 0.78
SSBP3-216ENST00000610401 ACPTQ9BZG2 426 aa19.91■□□□□ 0.78
SSBP3-216ENST00000610401 ELOVL6Q9H5J4 265 aa19.91■□□□□ 0.78
SSBP3-216ENST00000610401 SCN3BQ9NY72 215 aa19.91■□□□□ 0.78
SSBP3-216ENST00000610401 PCDHB8Q9UN66 801 aa19.91■□□□□ 0.78
SSBP3-216ENST00000610401 ATP11BQ9Y2G3 1177 aa19.91■□□□□ 0.78
SSBP3-216ENST00000610401 AKR1A1P14550 325 aa19.9■□□□□ 0.78
SSBP3-216ENST00000610401 OR1E2P47887 323 aa19.9■□□□□ 0.78
SSBP3-216ENST00000610401 CRISP3P54108 245 aa19.9■□□□□ 0.78
SSBP3-216ENST00000610401 CCL23P55773 120 aa19.9■□□□□ 0.78
SSBP3-216ENST00000610401 TUBA3CQ13748 450 aa19.9■□□□□ 0.78
SSBP3-216ENST00000610401 SF3B4Q15427 424 aaKnown RBP eCLIP19.9■□□□□ 0.781e-6■■■■■ 27.4
SSBP3-216ENST00000610401 KCNA10Q16322 511 aa19.9■□□□□ 0.78
SSBP3-216ENST00000610401 TAF12Q16514 161 aa19.9■□□□□ 0.78
SSBP3-216ENST00000610401 UTP15Q8TED0 518 aaKnown RBP19.9■□□□□ 0.78
SSBP3-216ENST00000610401 FOXJ1Q92949 421 aa19.9■□□□□ 0.78
SSBP3-216ENST00000610401 APIPQ96GX9 242 aa19.9■□□□□ 0.78
SSBP3-216ENST00000610401 FAM126AQ9BYI3 521 aaPredicted RBP19.9■□□□□ 0.78
SSBP3-216ENST00000610401 KRT84Q9NSB2 600 aa19.9■□□□□ 0.78
SSBP3-216ENST00000610401 DNMT3BQ9UBC3 853 aaKnown RBP19.9■□□□□ 0.78
SSBP3-216ENST00000610401 GPC6Q9Y625 555 aaPredicted RBP19.9■□□□□ 0.78
SSBP3-216ENST00000610401 DRGXA6NNA5 263 aa19.9■□□□□ 0.78
SSBP3-216ENST00000610401 EPOP01588 193 aa19.9■□□□□ 0.78
SSBP3-216ENST00000610401 GBAP04062 536 aa19.9■□□□□ 0.78
SSBP3-216ENST00000610401 EPB42P16452 691 aa19.9■□□□□ 0.78
SSBP3-216ENST00000610401 HOXB8P17481 243 aaPredicted RBP19.9■□□□□ 0.78
SSBP3-216ENST00000610401 RPS3AP61247 264 aaKnown RBP19.9■□□□□ 0.78
SSBP3-216ENST00000610401 ADAMTSL2Q86TH1 951 aa19.9■□□□□ 0.78
SSBP3-216ENST00000610401 TSPAN33Q86UF1 283 aa19.9■□□□□ 0.78
SSBP3-216ENST00000610401 SIRT5Q9NXA8 310 aa19.9■□□□□ 0.78
SSBP3-216ENST00000610401 TESMINQ9Y4I5 508 aa19.9■□□□□ 0.78
SSBP3-216ENST00000610401 EFCAB9A8MZ26 197 aa19.89■□□□□ 0.78
SSBP3-216ENST00000610401 SERPINB1P30740 379 aa19.89■□□□□ 0.78
SSBP3-216ENST00000610401 ARHGDIAP52565 204 aa19.89■□□□□ 0.78
SSBP3-216ENST00000610401 COL9A2Q14055 689 aaPredicted RBP19.89■□□□□ 0.78
SSBP3-216ENST00000610401 BTG3Q14201 252 aaPredicted RBP19.89■□□□□ 0.78
SSBP3-216ENST00000610401 GBX1Q14549 363 aa19.89■□□□□ 0.78
SSBP3-216ENST00000610401 MORN1Q5T089 497 aa19.89■□□□□ 0.78
SSBP3-216ENST00000610401 ANKRD13BQ86YJ7 626 aa19.89■□□□□ 0.78
SSBP3-216ENST00000610401 OR8J3Q8NGG0 315 aa19.89■□□□□ 0.78
SSBP3-216ENST00000610401 GTF3C2Q8WUA4 911 aaPredicted RBP19.89■□□□□ 0.78
SSBP3-216ENST00000610401 MBD1Q9UIS9 605 aaPredicted RBP19.89■□□□□ 0.78
SSBP3-216ENST00000610401 SMAD6O43541 496 aaKnown RBP19.89■□□□□ 0.77
SSBP3-216ENST00000610401 CHRM5P08912 532 aaPredicted RBP19.89■□□□□ 0.77
SSBP3-216ENST00000610401 KRT20P35900 424 aa19.89■□□□□ 0.77
SSBP3-216ENST00000610401 ATP5C1P36542 298 aaKnown RBP19.89■□□□□ 0.77
SSBP3-216ENST00000610401 RPS14P62263 151 aaKnown RBP19.89■□□□□ 0.77
SSBP3-216ENST00000610401 KIAA0040Q15053 153 aa19.89■□□□□ 0.77
SSBP3-216ENST00000610401 RUNDC3AQ59EK9 446 aa19.89■□□□□ 0.77
SSBP3-216ENST00000610401 RTP2Q5QGT7 225 aa19.89■□□□□ 0.77
SSBP3-216ENST00000610401 CPZQ66K79 652 aa19.89■□□□□ 0.77
SSBP3-216ENST00000610401 ANKS3Q6ZW76 656 aa19.89■□□□□ 0.77
SSBP3-216ENST00000610401 NUDT4Q9NZJ9 180 aa19.89■□□□□ 0.77
SSBP3-216ENST00000610401 DHRS7Q9Y394 339 aa19.89■□□□□ 0.77
SSBP3-216ENST00000610401 NINQ8N4C6 2090 aa19.89■□□□□ 0.77
SSBP3-216ENST00000610401 ARF5P84085 180 aa19.89■□□□□ 0.77
SSBP3-216ENST00000610401 ZNF648Q5T619 568 aaPredicted RBP19.89■□□□□ 0.77
SSBP3-216ENST00000610401 SPRYD7Q5W111 196 aa19.89■□□□□ 0.77
SSBP3-216ENST00000610401 USP50Q70EL3 339 aaPredicted RBP19.89■□□□□ 0.77
SSBP3-216ENST00000610401 MRPL10Q7Z7H8 261 aaKnown RBP19.89■□□□□ 0.77
SSBP3-216ENST00000610401 GORASP2Q9H8Y8 452 aa19.89■□□□□ 0.77
SSBP3-216ENST00000610401 AKIP1Q9NQ31 210 aa19.89■□□□□ 0.77
SSBP3-216ENST00000610401 AASDHPPTQ9NRN7 309 aa19.89■□□□□ 0.77
SSBP3-216ENST00000610401 PPT2Q9UMR5 302 aa19.89■□□□□ 0.77
SSBP3-216ENST00000610401 GREB1Q4ZG55 1949 aa19.88■□□□□ 0.77
SSBP3-216ENST00000610401 PIKFYVEQ9Y2I7 2098 aa19.88■□□□□ 0.77
SSBP3-216ENST00000610401 MANBAO00462 879 aa19.88■□□□□ 0.77
SSBP3-216ENST00000610401 SPNP16150 400 aa19.88■□□□□ 0.77
SSBP3-216ENST00000610401 SLC11A2P49281 568 aa19.88■□□□□ 0.77
SSBP3-216ENST00000610401 ADNP2Q6IQ32 1131 aa19.88■□□□□ 0.77
SSBP3-216ENST00000610401 P3H2Q8IVL5 708 aa19.88■□□□□ 0.77
SSBP3-216ENST00000610401 SPPL2AQ8TCT8 520 aa19.88■□□□□ 0.77
SSBP3-216ENST00000610401 MYLIPQ8WY64 445 aa19.88■□□□□ 0.77
SSBP3-216ENST00000610401 MROQ9BYG7 248 aa19.88■□□□□ 0.77
SSBP3-216ENST00000610401 C8orf4Q9NR00 106 aa19.88■□□□□ 0.77
SSBP3-216ENST00000610401 MTMR11A4FU01 709 aa19.88■□□□□ 0.77
SSBP3-216ENST00000610401 C2orf78A6NCI8 922 aa19.88■□□□□ 0.77
SSBP3-216ENST00000610401 RGS10O43665 173 aa19.88■□□□□ 0.77
SSBP3-216ENST00000610401 ESR1P03372 595 aa19.88■□□□□ 0.77
SSBP3-216ENST00000610401 TCEA1P23193 301 aaKnown RBP19.88■□□□□ 0.77
SSBP3-216ENST00000610401 LIPAP38571 399 aa19.88■□□□□ 0.77
SSBP3-216ENST00000610401 PTGER3P43115 390 aa19.88■□□□□ 0.77
SSBP3-216ENST00000610401 CCDC103Q8IW40 242 aa19.88■□□□□ 0.77
SSBP3-216ENST00000610401 SGIP1Q9BQI5 828 aa19.88■□□□□ 0.77
SSBP3-216ENST00000610401 CHCHD6Q9BRQ6 235 aa19.88■□□□□ 0.77
SSBP3-216ENST00000610401 DCSTAMPQ9H295 470 aa19.88■□□□□ 0.77
SSBP3-216ENST00000610401 MYO7AQ13402 2215 aa19.88■□□□□ 0.77
SSBP3-216ENST00000610401 ARNTLO00327 626 aa19.87■□□□□ 0.77
SSBP3-216ENST00000610401 ENGP17813 658 aa19.87■□□□□ 0.77
SSBP3-216ENST00000610401 GRIK2Q13002 908 aa19.87■□□□□ 0.77
SSBP3-216ENST00000610401 CHRNA6Q15825 494 aa19.87■□□□□ 0.77
SSBP3-216ENST00000610401 NLGN4XQ8N0W4 816 aa19.87■□□□□ 0.77
SSBP3-216ENST00000610401 GPR156Q8NFN8 814 aa19.87■□□□□ 0.77
SSBP3-216ENST00000610401 REXO4Q9GZR2 422 aaKnown RBP19.87■□□□□ 0.77
SSBP3-216ENST00000610401 C14orf119Q9NWQ9 140 aa19.87■□□□□ 0.77
SSBP3-216ENST00000610401 DOCK4Q8N1I0 1966 aa19.87■□□□□ 0.77
SSBP3-216ENST00000610401 SSX4O60224 188 aa19.87■□□□□ 0.77
SSBP3-216ENST00000610401 KLK8O60259 260 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms