RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 FZD4Q9ULV1 537 aa13.93□□□□□ -0.18
PCDHB16-201ENST00000609684 MATN4O95460 622 aa13.93□□□□□ -0.18
PCDHB16-201ENST00000609684 CBSLP0DN79 551 aa13.93□□□□□ -0.18
PCDHB16-201ENST00000609684 CPN2P22792 545 aa13.93□□□□□ -0.18
PCDHB16-201ENST00000609684 CBSP35520 551 aa13.93□□□□□ -0.18
PCDHB16-201ENST00000609684 DNAJB13P59910 316 aa13.93□□□□□ -0.18
PCDHB16-201ENST00000609684 SCARB2Q14108 478 aa13.93□□□□□ -0.18
PCDHB16-201ENST00000609684 GANABQ14697 944 aaKnown RBP13.93□□□□□ -0.18
PCDHB16-201ENST00000609684 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.93□□□□□ -0.18
PCDHB16-201ENST00000609684 MBOAT1Q6ZNC8 495 aa13.93□□□□□ -0.18
PCDHB16-201ENST00000609684 IGSF8Q969P0 613 aa13.93□□□□□ -0.18
PCDHB16-201ENST00000609684 RBM18Q96H35 190 aaKnown RBP13.93□□□□□ -0.18
PCDHB16-201ENST00000609684 ZNF347Q96SE7 839 aa13.93□□□□□ -0.18
PCDHB16-201ENST00000609684 COQ7Q99807 217 aa13.93□□□□□ -0.18
PCDHB16-201ENST00000609684 GPATCH1Q9BRR8 931 aaKnown RBP13.93□□□□□ -0.18
PCDHB16-201ENST00000609684 ABCB9Q9NP78 766 aa13.93□□□□□ -0.18
PCDHB16-201ENST00000609684 FLRT1Q9NZU1 646 aa13.93□□□□□ -0.18
PCDHB16-201ENST00000609684 PITPNM1O00562 1244 aa13.93□□□□□ -0.18
PCDHB16-201ENST00000609684 ZNF623O75123 536 aa13.93□□□□□ -0.18
PCDHB16-201ENST00000609684 TYRP14679 529 aa13.93□□□□□ -0.18
PCDHB16-201ENST00000609684 RHDQ02161 417 aa13.93□□□□□ -0.18
PCDHB16-201ENST00000609684 FOXM1Q08050 763 aa13.93□□□□□ -0.18
PCDHB16-201ENST00000609684 FAAH2Q6GMR7 532 aa13.93□□□□□ -0.18
PCDHB16-201ENST00000609684 NUDT13Q86X67 352 aa13.93□□□□□ -0.18
PCDHB16-201ENST00000609684 OR5AK3PQ8NH89 298 aa13.93□□□□□ -0.18
PCDHB16-201ENST00000609684 TMBIM1Q969X1 311 aa13.93□□□□□ -0.18
PCDHB16-201ENST00000609684 AMBNQ9NP70 447 aa13.93□□□□□ -0.18
PCDHB16-201ENST00000609684 DNAAF2Q9NVR5 837 aaKnown RBP13.93□□□□□ -0.18
PCDHB16-201ENST00000609684 ADAMTS5Q9UNA0 930 aa13.93□□□□□ -0.18
PCDHB16-201ENST00000609684 OAS3Q9Y6K5 1087 aaKnown RBP13.93□□□□□ -0.18
PCDHB16-201ENST00000609684 PLOD3O60568 738 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 PRKAR1AP10644 381 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 ZNF30P17039 623 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 ACTR1BP42025 376 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 ACTR1AP61163 376 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 FPGSQ05932 587 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 EGFLAMQ63HQ2 1017 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 OGFOD2Q6N063 350 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 THOC6Q86W42 341 aaKnown RBP13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 PDPRQ8NCN5 879 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 SLC35A5Q9BS91 424 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 C11orf49Q9H6J7 331 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 ACTR3BQ9P1U1 418 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 RNF11Q9Y3C5 154 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 MEIS3P2A8K0S8 358 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 STX16O14662 325 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 CHST10O43529 356 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 SSNA1O43805 119 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 OPN1SWP03999 348 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 ALOX5P09917 674 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 IQCF3P0C7M6 154 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 AGTR2P50052 363 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 CCR8P51685 355 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 PGGT1BP53609 377 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 RHAGQ02094 409 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 SPANXN4Q5MJ08 99 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 KRT74Q7RTS7 529 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 TP53INP2Q8IXH6 220 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 MAP10Q9P2G4 905 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 BCAS2O75934 225 aaPredicted RBP13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 C9P02748 559 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 PGRP06401 933 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 FMO3P31513 532 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 KHKP50053 298 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 NCBP2P52298 156 aaKnown RBP eCLIP13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 GPM6BQ13491 265 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 TEAD2Q15562 447 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 PPP1R3AQ16821 1122 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 CNPY1Q3B7I2 92 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 GPRC6AQ5T6X5 926 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 IGSF21Q96ID5 467 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 RAB11FIP5Q9BXF6 653 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 B4GALT6Q9UBX8 382 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 IKZF2Q9UKS7 526 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 CFAP20Q9Y6A4 193 aaKnown RBP13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 NUP98P52948 1817 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 GMFGO60234 142 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 POP7O75817 140 aaKnown RBP13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 CCL5P13501 91 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 IL7RP16871 459 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 RPL26P61254 145 aaKnown RBP13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 LRRC32Q14392 662 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 SEMA3AQ14563 771 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 SPIN4Q56A73 249 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 CXorf57Q6NSI4 855 aaKnown RBP13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 IKBIPQ70UQ0 350 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 TMEM135Q86UB9 458 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 OAFQ86UD1 273 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 TRPV3Q8NET8 790 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 ZNF354BQ96LW1 612 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 CARS2Q9HA77 564 aaKnown RBP13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 EVA1BQ9NVM1 165 aa13.92□□□□□ -0.18
PCDHB16-201ENST00000609684 RIIAD1A6NNX1 92 aa13.91□□□□□ -0.18
PCDHB16-201ENST00000609684 OR1I1O60431 355 aa13.91□□□□□ -0.18
PCDHB16-201ENST00000609684 MAFKO60675 156 aa13.91□□□□□ -0.18
PCDHB16-201ENST00000609684 LEPRP48357 1165 aaKnown RBP13.91□□□□□ -0.18
PCDHB16-201ENST00000609684 CRISP3P54108 245 aa13.91□□□□□ -0.18
PCDHB16-201ENST00000609684 TARDBPQ13148 414 aaKnown RBP eCLIP13.91□□□□□ -0.18
PCDHB16-201ENST00000609684 KRT77Q7Z794 578 aa13.91□□□□□ -0.18
PCDHB16-201ENST00000609684 RANBP3LQ86VV4 465 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms