RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 CDK15Q96Q40 435 aa11.21□□□□□ -0.62
CTCFL-221ENST00000608903 TRIT1Q9H3H1 467 aaKnown RBP11.21□□□□□ -0.62
CTCFL-221ENST00000608903 SMOC1Q9H4F8 434 aa11.21□□□□□ -0.62
CTCFL-221ENST00000608903 IL21RQ9HBE5 538 aa11.21□□□□□ -0.62
CTCFL-221ENST00000608903 HAO1Q9UJM8 370 aa11.21□□□□□ -0.62
CTCFL-221ENST00000608903 SLC22A14Q9Y267 594 aa11.21□□□□□ -0.62
CTCFL-221ENST00000608903 ARID1BQ8NFD5 2236 aaPredicted RBP11.21□□□□□ -0.62
CTCFL-221ENST00000608903 A0A1W2PPV9 198 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 E7ENX8 843 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 STK16O75716 305 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 DCTN3O75935 186 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 UNC5CO95185 931 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 HSPA4LO95757 839 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 MAPK9P45984 424 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 ARFIP2P53365 341 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 ERVPABLB-1P60509 514 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 TAP2Q03519 686 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 GTF2H2Q13888 395 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 GTF2H2CQ6P1K8 395 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 SUSD1Q6UWL2 747 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 CUZD1Q86UP6 607 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 KLHDC8AQ8IYD2 350 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 FAM46DQ8NEK8 389 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 OR52E1Q8NGJ3 308 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 OR2I1PQ8NGU4 316 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 AGAP11Q8TF27 550 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 RAD51AP1Q96B01 352 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 KCNA7Q96RP8 456 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 NOL11Q9H8H0 719 aaKnown RBP11.2□□□□□ -0.62
CTCFL-221ENST00000608903 ERVMER34-1Q9H9K5 563 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 CAPN10Q9HC96 672 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 HEY2Q9UBP5 337 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 BAIAP2L1Q9UHR4 511 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 ICKQ9UPZ9 632 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 PCDH15Q96QU1 1955 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 DMDP11532 3685 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 PCM1Q15154 2024 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 GPR179Q6PRD1 2367 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 K7EPI3 171 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 WDR47O94967 919 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 CBX6O95503 412 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 JUNP05412 331 aaKnown RBP11.2□□□□□ -0.62
CTCFL-221ENST00000608903 GNSP15586 552 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 HNMTP50135 292 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 PNLIPRP1P54315 467 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 UBE2IP63279 158 aaKnown RBP11.2□□□□□ -0.62
CTCFL-221ENST00000608903 ASPHQ12797 758 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 TRAF3Q13114 568 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 TEAD4Q15561 434 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 CYP2A13Q16696 494 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 DEFB133Q30KQ1 61 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 KANSL1Q7Z3B3 1105 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 CLNKQ7Z7G1 428 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 MAPK15Q8TD08 544 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 SLC37A2Q8TED4 501 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 MIEF2Q96C03 454 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 SLC32A1Q9H598 525 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 MVB12BQ9H7P6 319 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 RAP2CQ9Y3L5 183 aa11.2□□□□□ -0.62
CTCFL-221ENST00000608903 TNPO3Q9Y5L0 923 aaKnown RBP11.2□□□□□ -0.62
CTCFL-221ENST00000608903 PRR5-ARHGAP8B1AHC4 643 aa11.19□□□□□ -0.62
CTCFL-221ENST00000608903 AQP9O43315 295 aa11.19□□□□□ -0.62
CTCFL-221ENST00000608903 NOBOXO60393 691 aa11.19□□□□□ -0.62
CTCFL-221ENST00000608903 NQO1P15559 274 aaKnown RBP11.19□□□□□ -0.62
CTCFL-221ENST00000608903 NPPBP16860 134 aa11.19□□□□□ -0.62
CTCFL-221ENST00000608903 XRCC1P18887 633 aaPredicted RBP11.19□□□□□ -0.62
CTCFL-221ENST00000608903 SERPINB3P29508 390 aa11.19□□□□□ -0.62
CTCFL-221ENST00000608903 MAZP56270 477 aaKnown RBP11.19□□□□□ -0.62
CTCFL-221ENST00000608903 GRIK2Q13002 908 aa11.19□□□□□ -0.62
CTCFL-221ENST00000608903 UGT3A2Q3SY77 523 aa11.19□□□□□ -0.62
CTCFL-221ENST00000608903 CLEC6AQ6EIG7 209 aa11.19□□□□□ -0.62
CTCFL-221ENST00000608903 LETMD1Q6P1Q0 360 aa11.19□□□□□ -0.62
CTCFL-221ENST00000608903 THOC6Q86W42 341 aaKnown RBP11.19□□□□□ -0.62
CTCFL-221ENST00000608903 TCAIMQ8N3R3 496 aa11.19□□□□□ -0.62
CTCFL-221ENST00000608903 SFRP1Q8N474 314 aa11.19□□□□□ -0.62
CTCFL-221ENST00000608903 PPP4R1Q8TF05 950 aa11.19□□□□□ -0.62
CTCFL-221ENST00000608903 ZDHHC1Q8WTX9 485 aa11.19□□□□□ -0.62
CTCFL-221ENST00000608903 SKA1Q96BD8 255 aa11.19□□□□□ -0.62
CTCFL-221ENST00000608903 ELF4Q99607 663 aaPredicted RBP11.19□□□□□ -0.62
CTCFL-221ENST00000608903 SGPP1Q9BX95 441 aa11.19□□□□□ -0.62
CTCFL-221ENST00000608903 IPPKQ9H8X2 491 aa11.19□□□□□ -0.62
CTCFL-221ENST00000608903 MID1IP1Q9NPA3 183 aa11.19□□□□□ -0.62
CTCFL-221ENST00000608903 CPNE7Q9UBL6 633 aa11.19□□□□□ -0.62
CTCFL-221ENST00000608903 OPTCQ9UBM4 332 aa11.19□□□□□ -0.62
CTCFL-221ENST00000608903 SPASTQ9UBP0 616 aa11.19□□□□□ -0.62
CTCFL-221ENST00000608903 ZFP69BQ9UJL9 534 aa11.19□□□□□ -0.62
CTCFL-221ENST00000608903 VPS13AQ96RL7 3174 aa11.18□□□□□ -0.62
CTCFL-221ENST00000608903 B4DGG1 531 aa11.18□□□□□ -0.62
CTCFL-221ENST00000608903 OR4F21O95013 312 aa11.18□□□□□ -0.62
CTCFL-221ENST00000608903 KRT16P08779 473 aa11.18□□□□□ -0.62
CTCFL-221ENST00000608903 PSMB5P28074 263 aa11.18□□□□□ -0.62
CTCFL-221ENST00000608903 PEBP1P30086 187 aaKnown RBP11.18□□□□□ -0.62
CTCFL-221ENST00000608903 PKLRP30613 574 aa11.18□□□□□ -0.62
CTCFL-221ENST00000608903 SERPINB5P36952 375 aa11.18□□□□□ -0.62
CTCFL-221ENST00000608903 HALP42357 657 aa11.18□□□□□ -0.62
CTCFL-221ENST00000608903 RXRGP48443 463 aa11.18□□□□□ -0.62
CTCFL-221ENST00000608903 HNRNPKP61978 463 aaKnown RBP eCLIP11.18□□□□□ -0.62
CTCFL-221ENST00000608903 TBPL1P62380 186 aa11.18□□□□□ -0.62
CTCFL-221ENST00000608903 GALNT1Q10472 559 aaPredicted RBP11.18□□□□□ -0.62
CTCFL-221ENST00000608903 LCP2Q13094 533 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms