RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 PALM2Q8IXS6 379 aa13.87□□□□□ -0.19
PKNOX1-210ENST00000607049 DNAJC22Q8N4W6 341 aa13.87□□□□□ -0.19
PKNOX1-210ENST00000607049 ENDOVQ8N8Q3 282 aaKnown RBP13.87□□□□□ -0.19
PKNOX1-210ENST00000607049 LINC01555Q8NAE3 123 aa13.87□□□□□ -0.19
PKNOX1-210ENST00000607049 SLC38A9Q8NBW4 561 aa13.87□□□□□ -0.19
PKNOX1-210ENST00000607049 OR9A1PQ8NGU1 263 aa13.87□□□□□ -0.19
PKNOX1-210ENST00000607049 HMGCLL1Q8TB92 370 aa13.87□□□□□ -0.19
PKNOX1-210ENST00000607049 INPP5DQ92835 1189 aa13.87□□□□□ -0.19
PKNOX1-210ENST00000607049 PDLIM2Q96JY6 352 aa13.87□□□□□ -0.19
PKNOX1-210ENST00000607049 SIGLEC10Q96LC7 697 aa13.87□□□□□ -0.19
PKNOX1-210ENST00000607049 FAM60AQ9NP50 221 aa13.87□□□□□ -0.19
PKNOX1-210ENST00000607049 ACSS2Q9NR19 701 aa13.87□□□□□ -0.19
PKNOX1-210ENST00000607049 FBXO6Q9NRD1 293 aaPredicted RBP13.87□□□□□ -0.19
PKNOX1-210ENST00000607049 EURLQ9NYK6 297 aa13.87□□□□□ -0.19
PKNOX1-210ENST00000607049 IL1RAPL1Q9NZN1 696 aa13.87□□□□□ -0.19
PKNOX1-210ENST00000607049 IFT80Q9P2H3 777 aaPredicted RBP13.87□□□□□ -0.19
PKNOX1-210ENST00000607049 CIDEBQ9UHD4 219 aa13.87□□□□□ -0.19
PKNOX1-210ENST00000607049 TSR3Q9UJK0 312 aaKnown RBP13.87□□□□□ -0.19
PKNOX1-210ENST00000607049 FBXO5Q9UKT4 447 aa13.87□□□□□ -0.19
PKNOX1-210ENST00000607049 TCFL5Q9UL49 500 aa13.87□□□□□ -0.19
PKNOX1-210ENST00000607049 NFS1Q9Y697 457 aa13.87□□□□□ -0.19
PKNOX1-210ENST00000607049 ATMQ13315 3056 aa13.87□□□□□ -0.19
PKNOX1-210ENST00000607049 ZNF462Q96JM2 2506 aa13.86□□□□□ -0.19
PKNOX1-210ENST00000607049 PABPN1LA6NDY0 278 aaKnown RBP13.86□□□□□ -0.19
PKNOX1-210ENST00000607049 ZBTB14O43829 449 aa13.86□□□□□ -0.19
PKNOX1-210ENST00000607049 CCNDBP1O95273 360 aa13.86□□□□□ -0.19
PKNOX1-210ENST00000607049 MATN4O95460 622 aa13.86□□□□□ -0.19
PKNOX1-210ENST00000607049 ALAS2P22557 587 aa13.86□□□□□ -0.19
PKNOX1-210ENST00000607049 CMPK1P30085 196 aa13.86□□□□□ -0.19
PKNOX1-210ENST00000607049 RPA3P35244 121 aaPredicted RBP13.86□□□□□ -0.19
PKNOX1-210ENST00000607049 SKIV2L2P42285 1042 aaKnown RBP13.86□□□□□ -0.19
PKNOX1-210ENST00000607049 SLC1A2P43004 574 aa13.86□□□□□ -0.19
PKNOX1-210ENST00000607049 RGS4P49798 205 aa13.86□□□□□ -0.19
PKNOX1-210ENST00000607049 RRADP55042 308 aa13.86□□□□□ -0.19
PKNOX1-210ENST00000607049 RPS18P62269 152 aaKnown RBP13.86□□□□□ -0.19
PKNOX1-210ENST00000607049 GRB7Q14451 532 aa13.86□□□□□ -0.19
PKNOX1-210ENST00000607049 GRM7Q14831 915 aa13.86□□□□□ -0.19
PKNOX1-210ENST00000607049 ARHGAP19Q14CB8 494 aa13.86□□□□□ -0.19
PKNOX1-210ENST00000607049 NCF4Q15080 339 aa13.86□□□□□ -0.19
PKNOX1-210ENST00000607049 ZIC1Q15915 447 aa13.86□□□□□ -0.19
PKNOX1-210ENST00000607049 FAM214AQ32MH5 1076 aa13.86□□□□□ -0.19
PKNOX1-210ENST00000607049 PTCHD3Q3KNS1 767 aa13.86□□□□□ -0.19
PKNOX1-210ENST00000607049 BBS9Q3SYG4 887 aa13.86□□□□□ -0.19
PKNOX1-210ENST00000607049 ACSBG2Q5FVE4 666 aa13.86□□□□□ -0.19
PKNOX1-210ENST00000607049 YOD1Q5VVQ6 348 aaPredicted RBP13.86□□□□□ -0.19
PKNOX1-210ENST00000607049 MLIPQ5VWP3 458 aa13.86□□□□□ -0.19
PKNOX1-210ENST00000607049 FIGLAQ6QHK4 219 aa13.86□□□□□ -0.19
PKNOX1-210ENST00000607049 APLFQ8IW19 511 aaPredicted RBP13.86□□□□□ -0.19
PKNOX1-210ENST00000607049 DENND6AQ8IWF6 608 aa13.86□□□□□ -0.19
PKNOX1-210ENST00000607049 ZNF655Q8N720 491 aaPredicted RBP13.86□□□□□ -0.19
PKNOX1-210ENST00000607049 LMNTD1Q8N9Z9 388 aa13.86□□□□□ -0.19
PKNOX1-210ENST00000607049 TTC29Q8NA56 475 aaPredicted RBP13.86□□□□□ -0.19
PKNOX1-210ENST00000607049 FLVCR1-AS1Q8TAF5 88 aa13.86□□□□□ -0.19
PKNOX1-210ENST00000607049 SMPDL3AQ92484 453 aa13.86□□□□□ -0.19
PKNOX1-210ENST00000607049 ABHD17AQ96GS6 310 aa13.86□□□□□ -0.19
PKNOX1-210ENST00000607049 IP6K3Q96PC2 410 aa13.86□□□□□ -0.19
PKNOX1-210ENST00000607049 EBNA1BP2Q99848 306 aaKnown RBP13.86□□□□□ -0.19
PKNOX1-210ENST00000607049 SELENOSQ9BQE4 189 aa13.86□□□□□ -0.19
PKNOX1-210ENST00000607049 TRIM56Q9BRZ2 755 aaKnown RBP13.86□□□□□ -0.19
PKNOX1-210ENST00000607049 SPRTNQ9H040 489 aaPredicted RBP13.86□□□□□ -0.19
PKNOX1-210ENST00000607049 AKIRIN1Q9H9L7 192 aaPredicted RBP13.86□□□□□ -0.19
PKNOX1-210ENST00000607049 PPANQ9NQ55 473 aaKnown RBP13.86□□□□□ -0.19
PKNOX1-210ENST00000607049 IARS2Q9NSE4 1012 aaKnown RBP13.86□□□□□ -0.19
PKNOX1-210ENST00000607049 TRMT6Q9UJA5 497 aaKnown RBP13.86□□□□□ -0.19
PKNOX1-210ENST00000607049 ANAPC2Q9UJX6 822 aa13.86□□□□□ -0.19
PKNOX1-210ENST00000607049 USP27XA6NNY8 438 aa13.85□□□□□ -0.19
PKNOX1-210ENST00000607049 EIF3FO00303 357 aaPredicted RBP13.85□□□□□ -0.19
PKNOX1-210ENST00000607049 SRPX2O60687 465 aaPredicted RBP13.85□□□□□ -0.19
PKNOX1-210ENST00000607049 IGHEP01854 428 aa13.85□□□□□ -0.19
PKNOX1-210ENST00000607049 MPC1LP0DKB6 136 aa13.85□□□□□ -0.19
PKNOX1-210ENST00000607049 PEBP1P30086 187 aaKnown RBP13.85□□□□□ -0.19
PKNOX1-210ENST00000607049 CLCN7P51798 805 aa13.85□□□□□ -0.19
PKNOX1-210ENST00000607049 DHX9Q08211 1270 aaKnown RBP13.85□□□□□ -0.19
PKNOX1-210ENST00000607049 TSTA3Q13630 321 aaPredicted RBP13.85□□□□□ -0.19
PKNOX1-210ENST00000607049 GBX1Q14549 363 aa13.85□□□□□ -0.19
PKNOX1-210ENST00000607049 CRYMQ14894 314 aa13.85□□□□□ -0.19
PKNOX1-210ENST00000607049 CYP2A13Q16696 494 aa13.85□□□□□ -0.19
PKNOX1-210ENST00000607049 KIAA0408Q6ZU52 694 aa13.85□□□□□ -0.19
PKNOX1-210ENST00000607049 BBOF1Q8ND07 529 aa13.85□□□□□ -0.19
PKNOX1-210ENST00000607049 LRRC39Q96DD0 335 aa13.85□□□□□ -0.19
PKNOX1-210ENST00000607049 MIPEPQ99797 713 aa13.85□□□□□ -0.19
PKNOX1-210ENST00000607049 MENTQ9BUN1 341 aa13.85□□□□□ -0.19
PKNOX1-210ENST00000607049 ZNF71Q9NQZ8 489 aaPredicted RBP13.85□□□□□ -0.19
PKNOX1-210ENST00000607049 TAS2R13Q9NYV9 303 aa13.85□□□□□ -0.19
PKNOX1-210ENST00000607049 RUVBL2Q9Y230 463 aaKnown RBP13.85□□□□□ -0.19
PKNOX1-210ENST00000607049 MYO1CO00159 1063 aa13.84□□□□□ -0.19
PKNOX1-210ENST00000607049 PEX12O00623 359 aa13.84□□□□□ -0.19
PKNOX1-210ENST00000607049 SUV39H1O43463 412 aa13.84□□□□□ -0.19
PKNOX1-210ENST00000607049 PSIP1O75475 530 aaKnown RBP13.84□□□□□ -0.19
PKNOX1-210ENST00000607049 SYF2O95926 243 aaKnown RBP13.84□□□□□ -0.19
PKNOX1-210ENST00000607049 FURINP09958 794 aa13.84□□□□□ -0.19
PKNOX1-210ENST00000607049 ERVK-10P10266 1014 aa13.84□□□□□ -0.19
PKNOX1-210ENST00000607049 FOLR3P41439 243 aa13.84□□□□□ -0.19
PKNOX1-210ENST00000607049 ARL4CP56559 192 aa13.84□□□□□ -0.19
PKNOX1-210ENST00000607049 HIF1AQ16665 826 aa13.84□□□□□ -0.19
PKNOX1-210ENST00000607049 C1orf189Q5VU69 101 aa13.84□□□□□ -0.19
PKNOX1-210ENST00000607049 TCTN3Q6NUS6 607 aa13.84□□□□□ -0.19
PKNOX1-210ENST00000607049 MED25Q71SY5 747 aa13.84□□□□□ -0.19
PKNOX1-210ENST00000607049 PTRH1Q86Y79 214 aaKnown RBP13.84□□□□□ -0.19
PKNOX1-210ENST00000607049 CREG2Q8IUH2 290 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms