RNA–Protein interactions for RNA: ENST00000606602.1

SNX5-219, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-219ENST00000606602 SHANK1Q9Y566 2161 aa23.35■■□□□ 1.33
SNX5-219ENST00000606602 AGPSO00116 658 aa23.34■■□□□ 1.33
SNX5-219ENST00000606602 RASGRF2O14827 1237 aa23.34■■□□□ 1.33
SNX5-219ENST00000606602 CD3EAPO15446 510 aaKnown RBP23.34■■□□□ 1.33
SNX5-219ENST00000606602 PIM1P11309 404 aaPredicted RBP23.34■■□□□ 1.33
SNX5-219ENST00000606602 ITGAXP20702 1163 aa23.34■■□□□ 1.33
SNX5-219ENST00000606602 TTPAP49638 278 aa23.34■■□□□ 1.33
SNX5-219ENST00000606602 SOX8P57073 446 aa23.34■■□□□ 1.33
SNX5-219ENST00000606602 PCID2Q5JVF3 399 aa23.34■■□□□ 1.33
SNX5-219ENST00000606602 OVCH1Q7RTY7 1134 aa23.34■■□□□ 1.33
SNX5-219ENST00000606602 SKA2Q8WVK7 121 aaPredicted RBP23.34■■□□□ 1.33
SNX5-219ENST00000606602 CUTCQ9NTM9 273 aa23.34■■□□□ 1.33
SNX5-219ENST00000606602 CDC23Q9UJX2 597 aa23.34■■□□□ 1.33
SNX5-219ENST00000606602 SPTBN1Q01082 2364 aaKnown RBP23.33■■□□□ 1.33
SNX5-219ENST00000606602 A1L4Q6 167 aa23.33■■□□□ 1.33
SNX5-219ENST00000606602 DSCR3O14972 297 aa23.33■■□□□ 1.33
SNX5-219ENST00000606602 ZSCAN5DPP0CG00 497 aa23.33■■□□□ 1.33
SNX5-219ENST00000606602 MMP11P24347 488 aa23.33■■□□□ 1.33
SNX5-219ENST00000606602 MCM3P25205 808 aa23.33■■□□□ 1.33
SNX5-219ENST00000606602 ITGA3P26006 1051 aa23.33■■□□□ 1.33
SNX5-219ENST00000606602 SESN2P58004 480 aaPredicted RBP23.33■■□□□ 1.33
SNX5-219ENST00000606602 AIMP2Q13155 320 aaKnown RBP23.33■■□□□ 1.33
SNX5-219ENST00000606602 GRM7Q14831 915 aa23.33■■□□□ 1.33
SNX5-219ENST00000606602 NACC2Q96BF6 587 aa23.33■■□□□ 1.33
SNX5-219ENST00000606602 PANX3Q96QZ0 392 aa23.33■■□□□ 1.33
SNX5-219ENST00000606602 RAB11FIP5Q9BXF6 653 aa23.33■■□□□ 1.33
SNX5-219ENST00000606602 ZBTB20Q9HC78 741 aaPredicted RBP23.33■■□□□ 1.33
SNX5-219ENST00000606602 FBXL4Q9UKA2 621 aa23.33■■□□□ 1.33
SNX5-219ENST00000606602 TTC7AQ9ULT0 858 aaPredicted RBP23.33■■□□□ 1.33
SNX5-219ENST00000606602 TEX15Q9BXT5 2789 aa23.32■■□□□ 1.32
SNX5-219ENST00000606602 DDAH2O95865 285 aa23.32■■□□□ 1.32
SNX5-219ENST00000606602 ALBP02768 609 aa23.32■■□□□ 1.32
SNX5-219ENST00000606602 RPL22P35268 128 aaKnown RBP23.32■■□□□ 1.32
SNX5-219ENST00000606602 CRADDP78560 199 aa23.32■■□□□ 1.32
SNX5-219ENST00000606602 NKG7Q16617 165 aa23.32■■□□□ 1.32
SNX5-219ENST00000606602 TCTE1Q5JU00 501 aa23.32■■□□□ 1.32
SNX5-219ENST00000606602 SPC24Q8NBT2 197 aa23.32■■□□□ 1.32
SNX5-219ENST00000606602 ZDHHC19Q8WVZ1 309 aaPredicted RBP23.32■■□□□ 1.32
SNX5-219ENST00000606602 RAD51AP1Q96B01 352 aa23.32■■□□□ 1.32
SNX5-219ENST00000606602 SELENOSQ9BQE4 189 aa23.32■■□□□ 1.32
SNX5-219ENST00000606602 P2RY12Q9H244 342 aa23.32■■□□□ 1.32
SNX5-219ENST00000606602 WDR54Q9H977 334 aa23.32■■□□□ 1.32
SNX5-219ENST00000606602 SLC6A20Q9NP91 592 aa23.32■■□□□ 1.32
SNX5-219ENST00000606602 GNPTGQ9UJJ9 305 aa23.32■■□□□ 1.32
SNX5-219ENST00000606602 GUCA1BQ9UMX6 200 aa23.32■■□□□ 1.32
SNX5-219ENST00000606602 COPG1Q9Y678 874 aaKnown RBP23.32■■□□□ 1.32
SNX5-219ENST00000606602 FER1L5A0AVI2 2057 aa23.32■■□□□ 1.32
SNX5-219ENST00000606602 NBPF19A0A087WUL8 3843 aa23.32■■□□□ 1.32
SNX5-219ENST00000606602 ALOX12BO75342 701 aa23.31■■□□□ 1.32
SNX5-219ENST00000606602 NDUFS3O75489 264 aa23.31■■□□□ 1.32
SNX5-219ENST00000606602 CBX6O95503 412 aa23.31■■□□□ 1.32
SNX5-219ENST00000606602 ONECUT2O95948 504 aa23.31■■□□□ 1.32
SNX5-219ENST00000606602 ESPL1Q14674 2120 aa23.31■■□□□ 1.32
SNX5-219ENST00000606602 YOD1Q5VVQ6 348 aaPredicted RBP23.31■■□□□ 1.32
SNX5-219ENST00000606602 Q6ZS92 163 aa23.31■■□□□ 1.32
SNX5-219ENST00000606602 SHISA6Q6ZSJ9 500 aa23.31■■□□□ 1.32
SNX5-219ENST00000606602 RAB42Q8N4Z0 105 aa23.31■■□□□ 1.32
SNX5-219ENST00000606602 TTC29Q8NA56 475 aaPredicted RBP23.31■■□□□ 1.32
SNX5-219ENST00000606602 INPP5DQ92835 1189 aa23.31■■□□□ 1.32
SNX5-219ENST00000606602 ZUFSPQ96AP4 578 aa23.31■■□□□ 1.32
SNX5-219ENST00000606602 NFS1Q9Y697 457 aa23.31■■□□□ 1.32
SNX5-219ENST00000606602 ICE1Q9Y2F5 2266 aa23.3■■□□□ 1.32
SNX5-219ENST00000606602 TARM1B6A8C7 271 aa23.3■■□□□ 1.32
SNX5-219ENST00000606602 KPNA5O15131 536 aa23.3■■□□□ 1.32
SNX5-219ENST00000606602 PRICKLE3O43900 615 aaPredicted RBP23.3■■□□□ 1.32
SNX5-219ENST00000606602 C1orf105O95561 183 aa23.3■■□□□ 1.32
SNX5-219ENST00000606602 BDKRB1P46663 353 aa23.3■■□□□ 1.32
SNX5-219ENST00000606602 GLRBP48167 497 aa23.3■■□□□ 1.32
SNX5-219ENST00000606602 CCSMST1Q4G0I0 132 aa23.3■■□□□ 1.32
SNX5-219ENST00000606602 PRAMEF13Q5VWM6 474 aa23.3■■□□□ 1.32
SNX5-219ENST00000606602 COX15Q7KZN9 410 aa23.3■■□□□ 1.32
SNX5-219ENST00000606602 OTOAQ7RTW8 1153 aa23.3■■□□□ 1.32
SNX5-219ENST00000606602 LRRC6Q86X45 466 aa23.3■■□□□ 1.32
SNX5-219ENST00000606602 METTL27Q8N6F8 245 aaPredicted RBP23.3■■□□□ 1.32
SNX5-219ENST00000606602 OTUD6BQ8N6M0 293 aa23.3■■□□□ 1.32
SNX5-219ENST00000606602 SPSB2Q99619 263 aa23.3■■□□□ 1.32
SNX5-219ENST00000606602 MIPEPQ99797 713 aa23.3■■□□□ 1.32
SNX5-219ENST00000606602 TSGA10Q9BZW7 698 aa23.3■■□□□ 1.32
SNX5-219ENST00000606602 SLC26A1Q9H2B4 701 aa23.3■■□□□ 1.32
SNX5-219ENST00000606602 SOX17Q9H6I2 414 aaPredicted RBP23.3■■□□□ 1.32
SNX5-219ENST00000606602 EIF2B3Q9NR50 452 aaKnown RBP23.3■■□□□ 1.32
SNX5-219ENST00000606602 TREX1Q9NSU2 369 aa23.3■■□□□ 1.32
SNX5-219ENST00000606602 NXT1Q9UKK6 140 aaKnown RBP23.3■■□□□ 1.32
SNX5-219ENST00000606602 RUVBL2Q9Y230 463 aaKnown RBP23.3■■□□□ 1.32
SNX5-219ENST00000606602 MRFAP1Q9Y605 127 aa23.3■■□□□ 1.32
SNX5-219ENST00000606602 SOCS6O14544 535 aa23.29■■□□□ 1.32
SNX5-219ENST00000606602 CTSVO60911 334 aa23.29■■□□□ 1.32
SNX5-219ENST00000606602 FKBP9O95302 570 aa23.29■■□□□ 1.32
SNX5-219ENST00000606602 PSMB5P28074 263 aa23.29■■□□□ 1.32
SNX5-219ENST00000606602 NMBRP28336 390 aa23.29■■□□□ 1.32
SNX5-219ENST00000606602 OR1D4P47884 311 aa23.29■■□□□ 1.32
SNX5-219ENST00000606602 VSX2P58304 361 aaPredicted RBP23.29■■□□□ 1.32
SNX5-219ENST00000606602 RPS6KA1Q15418 735 aa23.29■■□□□ 1.32
SNX5-219ENST00000606602 FAM214AQ32MH5 1076 aa23.29■■□□□ 1.32
SNX5-219ENST00000606602 IRAK1BP1Q5VVH5 260 aa23.29■■□□□ 1.32
SNX5-219ENST00000606602 CUZD1Q86UP6 607 aa23.29■■□□□ 1.32
SNX5-219ENST00000606602 MPP5Q8N3R9 675 aa23.29■■□□□ 1.32
SNX5-219ENST00000606602 UBE2Q2Q8WVN8 375 aa23.29■■□□□ 1.32
SNX5-219ENST00000606602 ZNF285Q96NJ3 590 aa23.29■■□□□ 1.32
SNX5-219ENST00000606602 IL22Q9GZX6 179 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms