RNA–Protein interactions for RNA: ENST00000604036.1

FOCAD-211, Transcript of focadhesin, humanhuman

TSL 4

Gene FOCAD, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-211ENST00000604036 CACNA1GO43497 2377 aa23.04■■□□□ 1.28
FOCAD-211ENST00000604036 ZNF37AP17032 561 aaPredicted RBP23.03■■□□□ 1.28
FOCAD-211ENST00000604036 OAS2P29728 719 aaKnown RBP23.03■■□□□ 1.28
FOCAD-211ENST00000604036 HSD17B2P37059 387 aa23.03■■□□□ 1.28
FOCAD-211ENST00000604036 PNLIPRP1P54315 467 aa23.03■■□□□ 1.28
FOCAD-211ENST00000604036 TSTA3Q13630 321 aaPredicted RBP23.03■■□□□ 1.28
FOCAD-211ENST00000604036 SLMAPQ14BN4 828 aa23.03■■□□□ 1.28
FOCAD-211ENST00000604036 ARHGAP19Q14CB8 494 aa23.03■■□□□ 1.28
FOCAD-211ENST00000604036 SF1Q15637 639 aaKnown RBP23.03■■□□□ 1.28
FOCAD-211ENST00000604036 GPR19Q15760 415 aa23.03■■□□□ 1.28
FOCAD-211ENST00000604036 NKAPQ8N5F7 415 aaKnown RBP23.03■■□□□ 1.28
FOCAD-211ENST00000604036 TSPAN17Q96FV3 270 aa23.03■■□□□ 1.28
FOCAD-211ENST00000604036 SLC12A9Q9BXP2 914 aa23.03■■□□□ 1.28
FOCAD-211ENST00000604036 RARRES3Q9UL19 164 aa23.03■■□□□ 1.28
FOCAD-211ENST00000604036 PDE10AQ9Y233 779 aa23.03■■□□□ 1.28
FOCAD-211ENST00000604036 ZNF839A8K0R7 811 aa23.02■■□□□ 1.28
FOCAD-211ENST00000604036 STMND1H3BQB6 276 aa23.02■■□□□ 1.28
FOCAD-211ENST00000604036 SLC16A5O15375 505 aa23.02■■□□□ 1.28
FOCAD-211ENST00000604036 KLK10O43240 276 aa23.02■■□□□ 1.28
FOCAD-211ENST00000604036 PRICKLE3O43900 615 aaPredicted RBP23.02■■□□□ 1.28
FOCAD-211ENST00000604036 SLC16A8O95907 504 aa23.02■■□□□ 1.28
FOCAD-211ENST00000604036 ERGP11308 486 aa23.02■■□□□ 1.28
FOCAD-211ENST00000604036 FGF5P12034 268 aa23.02■■□□□ 1.28
FOCAD-211ENST00000604036 SP140Q13342 867 aa23.02■■□□□ 1.28
FOCAD-211ENST00000604036 PPP1R3BQ86XI6 285 aa23.02■■□□□ 1.28
FOCAD-211ENST00000604036 C19orf47Q8N9M1 422 aaKnown RBP23.02■■□□□ 1.28
FOCAD-211ENST00000604036 SMPDL3AQ92484 453 aa23.02■■□□□ 1.28
FOCAD-211ENST00000604036 RNF31Q96EP0 1072 aa23.02■■□□□ 1.28
FOCAD-211ENST00000604036 PDLIM5Q96HC4 596 aaKnown RBP23.02■■□□□ 1.28
FOCAD-211ENST00000604036 DPH1Q9BZG8 443 aa23.02■■□□□ 1.28
FOCAD-211ENST00000604036 ACSS3Q9H6R3 686 aa23.02■■□□□ 1.28
FOCAD-211ENST00000604036 PARVBQ9HBI1 364 aa23.02■■□□□ 1.28
FOCAD-211ENST00000604036 POPDC3Q9HBV1 291 aa23.02■■□□□ 1.28
FOCAD-211ENST00000604036 GPAMQ9HCL2 828 aa23.02■■□□□ 1.28
FOCAD-211ENST00000604036 CFAP47Q6ZTR5 3102 aa23.02■■□□□ 1.27
FOCAD-211ENST00000604036 AHCTF1Q8WYP5 2266 aa23.01■■□□□ 1.27
FOCAD-211ENST00000604036 CHD6Q8TD26 2715 aa23.01■■□□□ 1.27
FOCAD-211ENST00000604036 A0A087WV48 116 aa23.01■■□□□ 1.27
FOCAD-211ENST00000604036 A0A1W2PPV9 198 aa23.01■■□□□ 1.27
FOCAD-211ENST00000604036 LIPCP11150 499 aa23.01■■□□□ 1.27
FOCAD-211ENST00000604036 PSMB5P28074 263 aa23.01■■□□□ 1.27
FOCAD-211ENST00000604036 TUBB4BP68371 445 aa23.01■■□□□ 1.27
FOCAD-211ENST00000604036 TGIF1Q15583 401 aa23.01■■□□□ 1.27
FOCAD-211ENST00000604036 UAP1Q16222 522 aaPredicted RBP23.01■■□□□ 1.27
FOCAD-211ENST00000604036 SUSD1Q6UWL2 747 aa23.01■■□□□ 1.27
FOCAD-211ENST00000604036 SPACA3Q8IXA5 215 aa23.01■■□□□ 1.27
FOCAD-211ENST00000604036 SYTL1Q8IYJ3 562 aa23.01■■□□□ 1.27
FOCAD-211ENST00000604036 PPFIBP2Q8ND30 876 aa23.01■■□□□ 1.27
FOCAD-211ENST00000604036 ZNF480Q8WV37 535 aa23.01■■□□□ 1.27
FOCAD-211ENST00000604036 TCTN2Q96GX1 697 aa23.01■■□□□ 1.27
FOCAD-211ENST00000604036 KLHL20Q9Y2M5 609 aa23.01■■□□□ 1.27
FOCAD-211ENST00000604036 PABPN1LA6NDY0 278 aaKnown RBP23■■□□□ 1.27
FOCAD-211ENST00000604036 PHGDHO43175 533 aaKnown RBP23■■□□□ 1.27
FOCAD-211ENST00000604036 STK17BO94768 372 aa23■■□□□ 1.27
FOCAD-211ENST00000604036 HIST1H2AGP0C0S8 130 aaPredicted RBP23■■□□□ 1.27
FOCAD-211ENST00000604036 FAM153BP0C7A2 387 aa23■■□□□ 1.27
FOCAD-211ENST00000604036 STMN1P16949 149 aa23■■□□□ 1.27
FOCAD-211ENST00000604036 HIST1H2ADP20671 130 aa23■■□□□ 1.27
FOCAD-211ENST00000604036 MAGP20916 626 aa23■■□□□ 1.27
FOCAD-211ENST00000604036 ITPKBP27987 946 aa23■■□□□ 1.27
FOCAD-211ENST00000604036 CLN3Q13286 438 aa23■■□□□ 1.27
FOCAD-211ENST00000604036 ZIC1Q15915 447 aa23■■□□□ 1.27
FOCAD-211ENST00000604036 PHKG1Q16816 387 aa23■■□□□ 1.27
FOCAD-211ENST00000604036 FAM153CQ494X1 144 aa23■■□□□ 1.27
FOCAD-211ENST00000604036 LARP7Q4G0J3 582 aaKnown RBP eCLIP23■■□□□ 1.27
FOCAD-211ENST00000604036 CDHR3Q6ZTQ4 885 aa23■■□□□ 1.27
FOCAD-211ENST00000604036 BPHLQ86WA6 291 aaPredicted RBP23■■□□□ 1.27
FOCAD-211ENST00000604036 UHMK1Q8TAS1 419 aaKnown RBP23■■□□□ 1.27
FOCAD-211ENST00000604036 ANKRD49Q8WVL7 239 aa23■■□□□ 1.27
FOCAD-211ENST00000604036 ZNF501Q96CX3 271 aaPredicted RBP23■■□□□ 1.27
FOCAD-211ENST00000604036 HIST1H2AHQ96KK5 128 aa23■■□□□ 1.27
FOCAD-211ENST00000604036 CCDC138Q96M89 665 aa23■■□□□ 1.27
FOCAD-211ENST00000604036 MIPEPQ99797 713 aa23■■□□□ 1.27
FOCAD-211ENST00000604036 HIST1H2AJQ99878 128 aa23■■□□□ 1.27
FOCAD-211ENST00000604036 H2AFJQ9BTM1 129 aa23■■□□□ 1.27
FOCAD-211ENST00000604036 ACAT2Q9BWD1 397 aa23■■□□□ 1.27
FOCAD-211ENST00000604036 FUT8Q9BYC5 575 aa23■■□□□ 1.27
FOCAD-211ENST00000604036 TRIM54Q9BYV2 358 aa23■■□□□ 1.27
FOCAD-211ENST00000604036 ULBP3Q9BZM4 244 aa23■■□□□ 1.27
FOCAD-211ENST00000604036 FANCEQ9HB96 536 aa23■■□□□ 1.27
FOCAD-211ENST00000604036 FAM60AQ9NP50 221 aa23■■□□□ 1.27
FOCAD-211ENST00000604036 ABCF3Q9NUQ8 709 aa23■■□□□ 1.27
FOCAD-211ENST00000604036 INTS7Q9NVH2 962 aaKnown RBP23■■□□□ 1.27
FOCAD-211ENST00000604036 IQCJ-SCHIP1C9J366 451 aaPredicted RBP22.99■■□□□ 1.27
FOCAD-211ENST00000604036 FKBP9O95302 570 aa22.99■■□□□ 1.27
FOCAD-211ENST00000604036 IMPA1P29218 277 aa22.99■■□□□ 1.27
FOCAD-211ENST00000604036 RPA3P35244 121 aaPredicted RBP22.99■■□□□ 1.27
FOCAD-211ENST00000604036 KIAA1614Q5VZ46 1190 aa22.99■■□□□ 1.27
FOCAD-211ENST00000604036 MBOAT1Q6ZNC8 495 aa22.99■■□□□ 1.27
FOCAD-211ENST00000604036 GSPT2Q8IYD1 628 aaKnown RBP22.99■■□□□ 1.27
FOCAD-211ENST00000604036 OR2A1Q8NGT9 310 aa22.99■■□□□ 1.27
FOCAD-211ENST00000604036 OR8K5Q8NH50 307 aa22.99■■□□□ 1.27
FOCAD-211ENST00000604036 HNRNPLLQ8WVV9 542 aaKnown RBP22.99■■□□□ 1.27
FOCAD-211ENST00000604036 N4BP2L2Q92802 583 aaPredicted RBP22.99■■□□□ 1.27
FOCAD-211ENST00000604036 SPRY4Q9C004 299 aa22.99■■□□□ 1.27
FOCAD-211ENST00000604036 PILRAQ9UKJ1 303 aa22.99■■□□□ 1.27
FOCAD-211ENST00000604036 IKZF3Q9UKT9 509 aa22.99■■□□□ 1.27
FOCAD-211ENST00000604036 SPTBP11277 2137 aa22.99■■□□□ 1.27
FOCAD-211ENST00000604036 TMEM150CB9EJG8 249 aa22.98■■□□□ 1.27
FOCAD-211ENST00000604036 E7ENX8 843 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms