RNA–Protein interactions for RNA: ENST00000601697.5

PSMC4-206, Transcript of proteasome 26S subunit, ATPase 4, human

TSL 2

Gene PSMC4, Length 1,623 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC4-206	ENST00000601697	CPPED1	Q9BRF8	314 aa	Predicted RBP	13.75	□□□□□ -0.21
PSMC4-206	ENST00000601697	DCUN1D5	Q9BTE7	237 aa		13.75	□□□□□ -0.21
PSMC4-206	ENST00000601697	SMG9	Q9H0W8	520 aa	Known RBP	13.75	□□□□□ -0.21
PSMC4-206	ENST00000601697	SOX17	Q9H6I2	414 aa	Predicted RBP	13.75	□□□□□ -0.21
PSMC4-206	ENST00000601697	KAT8	Q9H7Z6	458 aa	Known RBP	13.75	□□□□□ -0.21
PSMC4-206	ENST00000601697	TBC1D23	Q9NUY8	699 aa		13.75	□□□□□ -0.21
PSMC4-206	ENST00000601697	DCAF13	Q9NV06	445 aa	Known RBP	13.75	□□□□□ -0.21
PSMC4-206	ENST00000601697	FAM118A	Q9NWS6	357 aa		13.75	□□□□□ -0.21
PSMC4-206	ENST00000601697	ANKRD12	Q6UB98	2062 aa		13.75	□□□□□ -0.21
PSMC4-206	ENST00000601697	TRIM64B	A6NI03	449 aa		13.74	□□□□□ -0.21
PSMC4-206	ENST00000601697	KPNA5	O15131	536 aa		13.74	□□□□□ -0.21
PSMC4-206	ENST00000601697	SMAD6	O43541	496 aa	Known RBP	13.74	□□□□□ -0.21
PSMC4-206	ENST00000601697	E2F6	O75461	281 aa		13.74	□□□□□ -0.21
PSMC4-206	ENST00000601697	CREG1	O75629	220 aa		13.74	□□□□□ -0.21
PSMC4-206	ENST00000601697	CCNA2	P20248	432 aa		13.74	□□□□□ -0.21
PSMC4-206	ENST00000601697	DDX6	P26196	483 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
PSMC4-206	ENST00000601697	GSTM2	P28161	218 aa		13.74	□□□□□ -0.21
PSMC4-206	ENST00000601697	SHMT2	P34897	504 aa		13.74	□□□□□ -0.21
PSMC4-206	ENST00000601697	PPP2R2B	Q00005	443 aa		13.74	□□□□□ -0.21
PSMC4-206	ENST00000601697	ZNF33B	Q06732	778 aa		13.74	□□□□□ -0.21
PSMC4-206	ENST00000601697	ABHD18	Q0P651	414 aa		13.74	□□□□□ -0.21
PSMC4-206	ENST00000601697	DPY19L1	Q2PZI1	675 aa		13.74	□□□□□ -0.21
PSMC4-206	ENST00000601697	GCNT7	Q6ZNI0	430 aa		13.74	□□□□□ -0.21
PSMC4-206	ENST00000601697	TMEM26	Q6ZUK4	368 aa		13.74	□□□□□ -0.21
PSMC4-206	ENST00000601697	UBE2R2	Q712K3	238 aa	Predicted RBP	13.74	□□□□□ -0.21
PSMC4-206	ENST00000601697	CALHM3	Q86XJ0	350 aa		13.74	□□□□□ -0.21
PSMC4-206	ENST00000601697	RAB2B	Q8WUD1	216 aa		13.74	□□□□□ -0.21
PSMC4-206	ENST00000601697	POF1B	Q8WVV4	589 aa		13.74	□□□□□ -0.21
PSMC4-206	ENST00000601697	BORCS5	Q969J3	196 aa		13.74	□□□□□ -0.21
PSMC4-206	ENST00000601697	TESC	Q96BS2	214 aa		13.74	□□□□□ -0.21
PSMC4-206	ENST00000601697	CCDC97	Q96F63	343 aa	Predicted RBP	13.74	□□□□□ -0.21
PSMC4-206	ENST00000601697	REXO5	Q96IC2	774 aa	Known RBP	13.74	□□□□□ -0.21
PSMC4-206	ENST00000601697	PAIP1	Q9H074	479 aa	Known RBP	13.74	□□□□□ -0.21
PSMC4-206	ENST00000601697	ADNP	Q9H2P0	1102 aa		13.74	□□□□□ -0.21
PSMC4-206	ENST00000601697	FANCE	Q9HB96	536 aa		13.74	□□□□□ -0.21
PSMC4-206	ENST00000601697	TLR9	Q9NR96	1032 aa		13.74	□□□□□ -0.21
PSMC4-206	ENST00000601697	FARSB	Q9NSD9	589 aa	Known RBP	13.74	□□□□□ -0.21
PSMC4-206	ENST00000601697	GALNT8	Q9NY28	637 aa		13.74	□□□□□ -0.21
PSMC4-206	ENST00000601697	SLC25A37	Q9NYZ2	338 aa		13.74	□□□□□ -0.21
PSMC4-206	ENST00000601697	SNX5	Q9Y5X3	404 aa		13.74	□□□□□ -0.21
PSMC4-206	ENST00000601697	SERTM1	A2A2V5	107 aa		13.73	□□□□□ -0.21
PSMC4-206	ENST00000601697	NPIPB8	E9PQR5	432 aa		13.73	□□□□□ -0.21
PSMC4-206	ENST00000601697		H0Y858	1186 aa		13.73	□□□□□ -0.21
PSMC4-206	ENST00000601697	PER2	O15055	1255 aa		13.73	□□□□□ -0.21
PSMC4-206	ENST00000601697	SEC14L2	O76054	403 aa		13.73	□□□□□ -0.21
PSMC4-206	ENST00000601697	PRKD3	O94806	890 aa		13.73	□□□□□ -0.21
PSMC4-206	ENST00000601697	ATE1	O95260	518 aa		13.73	□□□□□ -0.21
PSMC4-206	ENST00000601697	CYP2A7	P20853	494 aa		13.73	□□□□□ -0.21
PSMC4-206	ENST00000601697	MAP4	P27816	1152 aa	Known RBP	13.73	□□□□□ -0.21
PSMC4-206	ENST00000601697	ELK4	P28324	431 aa		13.73	□□□□□ -0.21
PSMC4-206	ENST00000601697	CD70	P32970	193 aa		13.73	□□□□□ -0.21
PSMC4-206	ENST00000601697	CCR2	P41597	374 aa		13.73	□□□□□ -0.21
PSMC4-206	ENST00000601697	RANBP1	P43487	201 aa		13.73	□□□□□ -0.21
PSMC4-206	ENST00000601697	GALK1	P51570	392 aa		13.73	□□□□□ -0.21
PSMC4-206	ENST00000601697	EPHA5	P54756	1037 aa		13.73	□□□□□ -0.21
PSMC4-206	ENST00000601697	TMED1	Q13445	227 aa		13.73	□□□□□ -0.21
PSMC4-206	ENST00000601697	BOP1	Q14137	746 aa	Known RBP	13.73	□□□□□ -0.21
PSMC4-206	ENST00000601697	PON2	Q15165	354 aa		13.73	□□□□□ -0.21
PSMC4-206	ENST00000601697	PLEKHG6	Q3KR16	790 aa		13.73	□□□□□ -0.21
PSMC4-206	ENST00000601697	ARHGAP15	Q53QZ3	475 aa		13.73	□□□□□ -0.21
PSMC4-206	ENST00000601697	ZC3H12B	Q5HYM0	836 aa	Known RBP	13.73	□□□□□ -0.21
PSMC4-206	ENST00000601697	SUSD1	Q6UWL2	747 aa		13.73	□□□□□ -0.21
PSMC4-206	ENST00000601697	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	13.73	□□□□□ -0.21
PSMC4-206	ENST00000601697	RTL10	Q7L3V2	364 aa		13.73	□□□□□ -0.21
PSMC4-206	ENST00000601697	MSRB3	Q8IXL7	192 aa		13.73	□□□□□ -0.21
PSMC4-206	ENST00000601697	KRTCAP2	Q8N6L1	136 aa		13.73	□□□□□ -0.21
PSMC4-206	ENST00000601697	FNDC8	Q8TC99	324 aa		13.73	□□□□□ -0.21
PSMC4-206	ENST00000601697	CSGALNACT1	Q8TDX6	532 aa		13.73	□□□□□ -0.21
PSMC4-206	ENST00000601697	NELL1	Q92832	810 aa		13.73	□□□□□ -0.21
PSMC4-206	ENST00000601697	SCRN2	Q96FV2	425 aa		13.73	□□□□□ -0.21
PSMC4-206	ENST00000601697	TBCD	Q9BTW9	1192 aa		13.73	□□□□□ -0.21
PSMC4-206	ENST00000601697	SLC12A9	Q9BXP2	914 aa		13.73	□□□□□ -0.21
PSMC4-206	ENST00000601697	ACPT	Q9BZG2	426 aa		13.73	□□□□□ -0.21
PSMC4-206	ENST00000601697	PREB	Q9HCU5	417 aa		13.73	□□□□□ -0.21
PSMC4-206	ENST00000601697	TBCCD1	Q9NVR7	557 aa		13.73	□□□□□ -0.21
PSMC4-206	ENST00000601697	HCFC1R1	Q9NWW0	138 aa		13.73	□□□□□ -0.21
PSMC4-206	ENST00000601697	CLEC4E	Q9ULY5	219 aa		13.73	□□□□□ -0.21
PSMC4-206	ENST00000601697	SAMD4A	Q9UPU9	718 aa	Known RBP	13.73	□□□□□ -0.21
PSMC4-206	ENST00000601697	PDE10A	Q9Y233	779 aa		13.73	□□□□□ -0.21
PSMC4-206	ENST00000601697	RWDD3	Q9Y3V2	267 aa		13.73	□□□□□ -0.21
PSMC4-206	ENST00000601697	SH3PXD2B	A1X283	911 aa		13.72	□□□□□ -0.21
PSMC4-206	ENST00000601697	EVPLL	A8MZ36	301 aa		13.72	□□□□□ -0.21
PSMC4-206	ENST00000601697	NUAK1	O60285	661 aa		13.72	□□□□□ -0.21
PSMC4-206	ENST00000601697	PDYN	P01213	254 aa		13.72	□□□□□ -0.21
PSMC4-206	ENST00000601697	TCF3	P15923	654 aa		13.72	□□□□□ -0.21
PSMC4-206	ENST00000601697	CRHBP	P24387	322 aa		13.72	□□□□□ -0.21
PSMC4-206	ENST00000601697	CA5A	P35218	305 aa		13.72	□□□□□ -0.21
PSMC4-206	ENST00000601697	YAP1	P46937	504 aa	Known RBP	13.72	□□□□□ -0.21
PSMC4-206	ENST00000601697	AP1S2	P56377	157 aa		13.72	□□□□□ -0.21
PSMC4-206	ENST00000601697	VAC14	Q08AM6	782 aa		13.72	□□□□□ -0.21
PSMC4-206	ENST00000601697	ABR	Q12979	859 aa		13.72	□□□□□ -0.21
PSMC4-206	ENST00000601697	CPSF6	Q16630	551 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
PSMC4-206	ENST00000601697	PLEKHS1	Q5SXH7	462 aa		13.72	□□□□□ -0.21
PSMC4-206	ENST00000601697	CRTC1	Q6UUV9	634 aa		13.72	□□□□□ -0.21
PSMC4-206	ENST00000601697	SPESP1	Q6UW49	350 aa		13.72	□□□□□ -0.21
PSMC4-206	ENST00000601697	PLPP6	Q8IY26	295 aa		13.72	□□□□□ -0.21
PSMC4-206	ENST00000601697	BEND7	Q8N7W2	519 aa	Predicted RBP	13.72	□□□□□ -0.21
PSMC4-206	ENST00000601697	L3MBTL4	Q8NA19	623 aa		13.72	□□□□□ -0.21
PSMC4-206	ENST00000601697	GPR26	Q8NDV2	337 aa		13.72	□□□□□ -0.21
PSMC4-206	ENST00000601697	SETD9	Q8NE22	299 aa		13.72	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms