RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 IRF9Q00978 393 aa18.68■□□□□ 0.58
UPF1-209ENST00000600310 TAP2Q03519 686 aa18.68■□□□□ 0.58
UPF1-209ENST00000600310 FBXO38Q6PIJ6 1188 aa18.68■□□□□ 0.58
UPF1-209ENST00000600310 ISCA2Q86U28 154 aa18.68■□□□□ 0.58
UPF1-209ENST00000600310 TAX1BP1Q86VP1 789 aa18.68■□□□□ 0.58
UPF1-209ENST00000600310 LRRC56Q8IYG6 542 aaPredicted RBP18.68■□□□□ 0.58
UPF1-209ENST00000600310 SYTL1Q8IYJ3 562 aa18.68■□□□□ 0.58
UPF1-209ENST00000600310 FBXO39Q8N4B4 442 aa18.68■□□□□ 0.58
UPF1-209ENST00000600310 OR2W6PQ8NHA6 318 aa18.68■□□□□ 0.58
UPF1-209ENST00000600310 MZB1Q8WU39 189 aa18.68■□□□□ 0.58
UPF1-209ENST00000600310 KCTD4Q8WVF5 259 aa18.68■□□□□ 0.58
UPF1-209ENST00000600310 PTERQ96BW5 349 aa18.68■□□□□ 0.58
UPF1-209ENST00000600310 SLC41A2Q96JW4 573 aa18.68■□□□□ 0.58
UPF1-209ENST00000600310 VPS11Q9H270 941 aa18.68■□□□□ 0.58
UPF1-209ENST00000600310 ARL15Q9NXU5 204 aa18.68■□□□□ 0.58
UPF1-209ENST00000600310 EURLQ9NYK6 297 aa18.68■□□□□ 0.58
UPF1-209ENST00000600310 LOXL2Q9Y4K0 774 aa18.68■□□□□ 0.58
UPF1-209ENST00000600310 PCDHGA8Q9Y5G5 932 aa18.68■□□□□ 0.58
UPF1-209ENST00000600310 CACNA1BQ00975 2339 aa18.68■□□□□ 0.58
UPF1-209ENST00000600310 CCDC189A1A4V9 331 aa18.67■□□□□ 0.58
UPF1-209ENST00000600310 TRABD2BA6NFA1 517 aa18.67■□□□□ 0.58
UPF1-209ENST00000600310 PLD2O14939 933 aa18.67■□□□□ 0.58
UPF1-209ENST00000600310 CDH16O75309 829 aa18.67■□□□□ 0.58
UPF1-209ENST00000600310 ERLIN1O75477 346 aa18.67■□□□□ 0.58
UPF1-209ENST00000600310 RFPL1O75677 317 aa18.67■□□□□ 0.58
UPF1-209ENST00000600310 KLHL2O95198 593 aa18.67■□□□□ 0.58
UPF1-209ENST00000600310 FKBP9O95302 570 aa18.67■□□□□ 0.58
UPF1-209ENST00000600310 SLCO1A2P46721 670 aa18.67■□□□□ 0.58
UPF1-209ENST00000600310 SEPHS1P49903 392 aa18.67■□□□□ 0.58
UPF1-209ENST00000600310 RTP5Q14D33 572 aa18.67■□□□□ 0.58
UPF1-209ENST00000600310 OR4D1Q15615 310 aa18.67■□□□□ 0.58
UPF1-209ENST00000600310 FAM83EQ2M2I3 478 aa18.67■□□□□ 0.58
UPF1-209ENST00000600310 C3orf38Q5JPI3 329 aa18.67■□□□□ 0.58
UPF1-209ENST00000600310 AGTRAPQ6RW13 159 aa18.67■□□□□ 0.58
UPF1-209ENST00000600310 MBOAT1Q6ZNC8 495 aa18.67■□□□□ 0.58
UPF1-209ENST00000600310 STAG3L4Q8TBR4 150 aa18.67■□□□□ 0.58
UPF1-209ENST00000600310 EPS8L3Q8TE67 593 aaKnown RBP18.67■□□□□ 0.58
UPF1-209ENST00000600310 FBXL8Q96CD0 374 aa18.67■□□□□ 0.58
UPF1-209ENST00000600310 CABS1Q96KC9 395 aa18.67■□□□□ 0.58
UPF1-209ENST00000600310 POLR1BQ9H9Y6 1135 aa18.67■□□□□ 0.58
UPF1-209ENST00000600310 UTP6Q9NYH9 597 aaKnown RBP18.67■□□□□ 0.58
UPF1-209ENST00000600310 TBK1Q9UHD2 729 aa18.67■□□□□ 0.58
UPF1-209ENST00000600310 SATB2Q9UPW6 733 aa18.67■□□□□ 0.58
UPF1-209ENST00000600310 PCDHB11Q9Y5F2 797 aa18.67■□□□□ 0.58
UPF1-209ENST00000600310 A0A0J9YY10 115 aa18.66■□□□□ 0.58
UPF1-209ENST00000600310 SLC9B1P1A6NJY1 282 aa18.66■□□□□ 0.58
UPF1-209ENST00000600310 ZBTB11O95625 1053 aaPredicted RBP18.66■□□□□ 0.58
UPF1-209ENST00000600310 GUCA1CO95843 209 aa18.66■□□□□ 0.58
UPF1-209ENST00000600310 COL6A2P12110 1019 aa18.66■□□□□ 0.58
UPF1-209ENST00000600310 NELFEP18615 380 aaKnown RBP18.66■□□□□ 0.58
UPF1-209ENST00000600310 TFEBP19484 476 aa18.66■□□□□ 0.58
UPF1-209ENST00000600310 IFFO1Q0D2I5 559 aa18.66■□□□□ 0.58
UPF1-209ENST00000600310 TGFBIQ15582 683 aa18.66■□□□□ 0.58
UPF1-209ENST00000600310 SF1Q15637 639 aaKnown RBP18.66■□□□□ 0.58
UPF1-209ENST00000600310 SUSD1Q6UWL2 747 aa18.66■□□□□ 0.58
UPF1-209ENST00000600310 FRA10AC1Q70Z53 315 aa18.66■□□□□ 0.58
UPF1-209ENST00000600310 TRIM73Q86UV7 250 aa18.66■□□□□ 0.58
UPF1-209ENST00000600310 GPSM1Q86YR5 675 aa18.66■□□□□ 0.58
UPF1-209ENST00000600310 PLD6Q8N2A8 252 aaKnown RBP18.66■□□□□ 0.58
UPF1-209ENST00000600310 RIBC1Q8N443 379 aaPredicted RBP18.66■□□□□ 0.58
UPF1-209ENST00000600310 PPFIBP2Q8ND30 876 aa18.66■□□□□ 0.58
UPF1-209ENST00000600310 OR2A1Q8NGT9 310 aa18.66■□□□□ 0.58
UPF1-209ENST00000600310 ACMSDQ8TDX5 336 aa18.66■□□□□ 0.58
UPF1-209ENST00000600310 ATL1Q8WXF7 558 aa18.66■□□□□ 0.58
UPF1-209ENST00000600310 PRR11Q96HE9 360 aaPredicted RBP18.66■□□□□ 0.58
UPF1-209ENST00000600310 GPR78Q96P69 363 aa18.66■□□□□ 0.58
UPF1-209ENST00000600310 TRAPPC9Q96Q05 1148 aa18.66■□□□□ 0.58
UPF1-209ENST00000600310 ROPN1BQ9BZX4 212 aaPredicted RBP18.66■□□□□ 0.58
UPF1-209ENST00000600310 ALG9Q9H6U8 611 aa18.66■□□□□ 0.58
UPF1-209ENST00000600310 ROPN1Q9HAT0 212 aaPredicted RBP18.66■□□□□ 0.58
UPF1-209ENST00000600310 PLAAQ9Y263 795 aa18.66■□□□□ 0.58
UPF1-209ENST00000600310 BTRCQ9Y297 605 aa18.66■□□□□ 0.58
UPF1-209ENST00000600310 PMS2P1A4D2B8 440 aa18.65■□□□□ 0.58
UPF1-209ENST00000600310 SMIM23A6NLE4 172 aa18.65■□□□□ 0.58
UPF1-209ENST00000600310 EFCAB7A8K855 629 aa18.65■□□□□ 0.58
UPF1-209ENST00000600310 B4E171 279 aa18.65■□□□□ 0.58
UPF1-209ENST00000600310 AGRPO00253 132 aa18.65■□□□□ 0.58
UPF1-209ENST00000600310 ANXA5P08758 320 aa18.65■□□□□ 0.58
UPF1-209ENST00000600310 JMJD7P0C870 316 aa18.65■□□□□ 0.58
UPF1-209ENST00000600310 CCL4P13236 92 aa18.65■□□□□ 0.58
UPF1-209ENST00000600310 HGFP14210 728 aa18.65■□□□□ 0.58
UPF1-209ENST00000600310 PVRP15151 417 aa18.65■□□□□ 0.58
UPF1-209ENST00000600310 ST6GAL1P15907 406 aa18.65■□□□□ 0.58
UPF1-209ENST00000600310 RPA3P35244 121 aaPredicted RBP18.65■□□□□ 0.58
UPF1-209ENST00000600310 TSPAN7P41732 249 aa18.65■□□□□ 0.58
UPF1-209ENST00000600310 KCNC1P48547 511 aa18.65■□□□□ 0.58
UPF1-209ENST00000600310 GABREP78334 506 aa18.65■□□□□ 0.58
UPF1-209ENST00000600310 HSD11B2P80365 405 aa18.65■□□□□ 0.58
UPF1-209ENST00000600310 ACAP2Q15057 778 aa18.65■□□□□ 0.58
UPF1-209ENST00000600310 ZXDCQ2QGD7 858 aaPredicted RBP18.65■□□□□ 0.58
UPF1-209ENST00000600310 CDKL4Q5MAI5 379 aa18.65■□□□□ 0.58
UPF1-209ENST00000600310 KLC3Q6P597 504 aa18.65■□□□□ 0.58
UPF1-209ENST00000600310 CLEC14AQ86T13 490 aa18.65■□□□□ 0.58
UPF1-209ENST00000600310 FAM20CQ8IXL6 584 aa18.65■□□□□ 0.58
UPF1-209ENST00000600310 D2HGDHQ8N465 521 aa18.65■□□□□ 0.58
UPF1-209ENST00000600310 BMPERQ8N8U9 685 aa18.65■□□□□ 0.58
UPF1-209ENST00000600310 MYRIPQ8NFW9 859 aa18.65■□□□□ 0.58
UPF1-209ENST00000600310 OR2L3Q8NG85 312 aa18.65■□□□□ 0.58
UPF1-209ENST00000600310 RHEBL1Q8TAI7 183 aa18.65■□□□□ 0.58
UPF1-209ENST00000600310 ATOH8Q96SQ7 321 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms