RNA–Protein interactions for RNA: ENST00000599589.5

ARHGEF1-218, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-218ENST00000599589 TSPYL5Q86VY4 417 aaPredicted RBP18.86■□□□□ 0.61
ARHGEF1-218ENST00000599589 APH1BQ8WW43 257 aa18.86■□□□□ 0.61
ARHGEF1-218ENST00000599589 OR52E6Q96RD3 313 aa18.86■□□□□ 0.61
ARHGEF1-218ENST00000599589 WDR70Q9NW82 654 aa18.86■□□□□ 0.61
ARHGEF1-218ENST00000599589 BOLA1Q9Y3E2 137 aa18.86■□□□□ 0.61
ARHGEF1-218ENST00000599589 DOCK4Q8N1I0 1966 aa18.85■□□□□ 0.61
ARHGEF1-218ENST00000599589 A8MV72 311 aaPredicted RBP18.85■□□□□ 0.61
ARHGEF1-218ENST00000599589 hCG_2039718K7EN88 272 aa18.85■□□□□ 0.61
ARHGEF1-218ENST00000599589 MUSKO15146 869 aa18.85■□□□□ 0.61
ARHGEF1-218ENST00000599589 SEC22BO75396 215 aa18.85■□□□□ 0.61
ARHGEF1-218ENST00000599589 HLA-DPA1P20036 260 aa18.85■□□□□ 0.61
ARHGEF1-218ENST00000599589 MAGEA2P43356 314 aa18.85■□□□□ 0.61
ARHGEF1-218ENST00000599589 TIGD6Q17RP2 521 aa18.85■□□□□ 0.61
ARHGEF1-218ENST00000599589 PROX2Q3B8N5 592 aa18.85■□□□□ 0.61
ARHGEF1-218ENST00000599589 NXNL2Q5VZ03 156 aa18.85■□□□□ 0.61
ARHGEF1-218ENST00000599589 LIX1Q8N485 282 aa18.85■□□□□ 0.61
ARHGEF1-218ENST00000599589 CLHC1Q8NHS4 586 aa18.85■□□□□ 0.61
ARHGEF1-218ENST00000599589 SNX18Q96RF0 628 aa18.85■□□□□ 0.61
ARHGEF1-218ENST00000599589 TRIM62Q9BVG3 475 aa18.85■□□□□ 0.61
ARHGEF1-218ENST00000599589 NUAK2Q9H093 628 aa18.85■□□□□ 0.61
ARHGEF1-218ENST00000599589 SARS2Q9NP81 518 aaKnown RBP18.85■□□□□ 0.61
ARHGEF1-218ENST00000599589 ADPRHL2Q9NX46 363 aa18.85■□□□□ 0.61
ARHGEF1-218ENST00000599589 HECAQ9UBI9 543 aaPredicted RBP18.85■□□□□ 0.61
ARHGEF1-218ENST00000599589 TRMT6Q9UJA5 497 aaKnown RBP18.85■□□□□ 0.61
ARHGEF1-218ENST00000599589 AP3D1O14617 1153 aa18.85■□□□□ 0.61
ARHGEF1-218ENST00000599589 PER2O15055 1255 aa18.85■□□□□ 0.61
ARHGEF1-218ENST00000599589 OR1I1O60431 355 aa18.85■□□□□ 0.61
ARHGEF1-218ENST00000599589 ADAMTS4O75173 837 aa18.85■□□□□ 0.61
ARHGEF1-218ENST00000599589 PCSK1P29120 753 aa18.85■□□□□ 0.61
ARHGEF1-218ENST00000599589 THPOP40225 353 aa18.85■□□□□ 0.61
ARHGEF1-218ENST00000599589 GZMMP51124 257 aa18.85■□□□□ 0.61
ARHGEF1-218ENST00000599589 IL2P60568 153 aa18.85■□□□□ 0.61
ARHGEF1-218ENST00000599589 KIAA1614Q5VZ46 1190 aa18.85■□□□□ 0.61
ARHGEF1-218ENST00000599589 ATG9BQ674R7 924 aa18.85■□□□□ 0.61
ARHGEF1-218ENST00000599589 CALHM3Q86XJ0 350 aa18.85■□□□□ 0.61
ARHGEF1-218ENST00000599589 PPP3R2Q96LZ3 170 aa18.85■□□□□ 0.61
ARHGEF1-218ENST00000599589 COPS4Q9BT78 406 aa18.85■□□□□ 0.61
ARHGEF1-218ENST00000599589 KRT84Q9NSB2 600 aa18.85■□□□□ 0.61
ARHGEF1-218ENST00000599589 C14orf119Q9NWQ9 140 aa18.85■□□□□ 0.61
ARHGEF1-218ENST00000599589 KIF17Q9P2E2 1029 aa18.85■□□□□ 0.61
ARHGEF1-218ENST00000599589 PADI3Q9ULW8 664 aa18.85■□□□□ 0.61
ARHGEF1-218ENST00000599589 A3GALT2U3KPV4 340 aa18.85■□□□□ 0.61
ARHGEF1-218ENST00000599589 CASTOR2A6NHX0 329 aa18.84■□□□□ 0.61
ARHGEF1-218ENST00000599589 ZNF623O75123 536 aa18.84■□□□□ 0.61
ARHGEF1-218ENST00000599589 VPS26AO75436 327 aa18.84■□□□□ 0.61
ARHGEF1-218ENST00000599589 ASGR1P07306 291 aa18.84■□□□□ 0.61
ARHGEF1-218ENST00000599589 PRKCAP17252 672 aa18.84■□□□□ 0.61
ARHGEF1-218ENST00000599589 POLR2EP19388 210 aaKnown RBP18.84■□□□□ 0.61
ARHGEF1-218ENST00000599589 HMGCS1Q01581 520 aa18.84■□□□□ 0.61
ARHGEF1-218ENST00000599589 UPP1Q16831 310 aa18.84■□□□□ 0.61
ARHGEF1-218ENST00000599589 TTC23LQ6PF05 361 aa18.84■□□□□ 0.61
ARHGEF1-218ENST00000599589 UBQLNLQ8IYU4 475 aa18.84■□□□□ 0.61
ARHGEF1-218ENST00000599589 ENTHD1Q8IYW4 607 aa18.84■□□□□ 0.61
ARHGEF1-218ENST00000599589 OR4K2Q8NGD2 314 aa18.84■□□□□ 0.61
ARHGEF1-218ENST00000599589 DMRTB1Q96MA1 342 aa18.84■□□□□ 0.61
ARHGEF1-218ENST00000599589 PAAF1Q9BRP4 392 aa18.84■□□□□ 0.61
ARHGEF1-218ENST00000599589 NMUR1Q9HB89 426 aa18.84■□□□□ 0.61
ARHGEF1-218ENST00000599589 CCL27Q9Y4X3 112 aa18.84■□□□□ 0.61
ARHGEF1-218ENST00000599589 TRBV5-3A0A0A0MS03 114 aa18.84■□□□□ 0.61
ARHGEF1-218ENST00000599589 FFAR3O14843 346 aa18.84■□□□□ 0.61
ARHGEF1-218ENST00000599589 GPR42O15529 346 aa18.84■□□□□ 0.61
ARHGEF1-218ENST00000599589 IL6P05231 212 aa18.84■□□□□ 0.61
ARHGEF1-218ENST00000599589 IL1RNP18510 177 aa18.84■□□□□ 0.61
ARHGEF1-218ENST00000599589 CA8P35219 290 aa18.84■□□□□ 0.61
ARHGEF1-218ENST00000599589 RPP38P78345 283 aaKnown RBP18.84■□□□□ 0.61
ARHGEF1-218ENST00000599589 CACNB2Q08289 660 aaPredicted RBP18.84■□□□□ 0.61
ARHGEF1-218ENST00000599589 GTF2H2Q13888 395 aa18.84■□□□□ 0.61
ARHGEF1-218ENST00000599589 CDK10Q15131 360 aa18.84■□□□□ 0.61
ARHGEF1-218ENST00000599589 ZFP69Q49AA0 526 aa18.84■□□□□ 0.61
ARHGEF1-218ENST00000599589 CCDC58Q4VC31 144 aa18.84■□□□□ 0.61
ARHGEF1-218ENST00000599589 GTF2H2CQ6P1K8 395 aa18.84■□□□□ 0.61
ARHGEF1-218ENST00000599589 SCD5Q86SK9 330 aa18.84■□□□□ 0.61
ARHGEF1-218ENST00000599589 PLPP6Q8IY26 295 aa18.84■□□□□ 0.61
ARHGEF1-218ENST00000599589 CD200R1Q8TD46 325 aa18.84■□□□□ 0.61
ARHGEF1-218ENST00000599589 Q96MT0 163 aa18.84■□□□□ 0.61
ARHGEF1-218ENST00000599589 OR51E2Q9H255 320 aa18.84■□□□□ 0.61
ARHGEF1-218ENST00000599589 WBP11Q9Y2W2 641 aaKnown RBP18.84■□□□□ 0.61
ARHGEF1-218ENST00000599589 TBKBP1A7MCY6 615 aa18.83■□□□□ 0.61
ARHGEF1-218ENST00000599589 CD52P31358 61 aa18.83■□□□□ 0.61
ARHGEF1-218ENST00000599589 ATG16L2Q8NAA4 619 aa18.83■□□□□ 0.61
ARHGEF1-218ENST00000599589 DEPDC7Q96QD5 511 aa18.83■□□□□ 0.61
ARHGEF1-218ENST00000599589 CPPED1Q9BRF8 314 aaPredicted RBP18.83■□□□□ 0.61
ARHGEF1-218ENST00000599589 ZYG11BQ9C0D3 744 aa18.83■□□□□ 0.61
ARHGEF1-218ENST00000599589 TM9SF3Q9HD45 589 aa18.83■□□□□ 0.61
ARHGEF1-218ENST00000599589 AMBNQ9NP70 447 aa18.83■□□□□ 0.61
ARHGEF1-218ENST00000599589 FARSBQ9NSD9 589 aaKnown RBP18.83■□□□□ 0.61
ARHGEF1-218ENST00000599589 NLE1Q9NVX2 485 aaPredicted RBP18.83■□□□□ 0.61
ARHGEF1-218ENST00000599589 NPAP1Q9NZP6 1156 aa18.83■□□□□ 0.61
ARHGEF1-218ENST00000599589 FNDC3AQ9Y2H6 1198 aaKnown RBP18.83■□□□□ 0.61
ARHGEF1-218ENST00000599589 RPLP0P05388 317 aaKnown RBP18.83■□□□□ 0.6
ARHGEF1-218ENST00000599589 PKMP14618 531 aaKnown RBP18.83■□□□□ 0.6
ARHGEF1-218ENST00000599589 DNAJA1P31689 397 aaKnown RBP18.83■□□□□ 0.6
ARHGEF1-218ENST00000599589 KCNA10Q16322 511 aa18.83■□□□□ 0.6
ARHGEF1-218ENST00000599589 BCL7AQ4VC05 210 aa18.83■□□□□ 0.6
ARHGEF1-218ENST00000599589 PAN2Q504Q3 1202 aaKnown RBP18.83■□□□□ 0.6
ARHGEF1-218ENST00000599589 TIGD5Q53EQ6 642 aa18.83■□□□□ 0.6
ARHGEF1-218ENST00000599589 MILR1Q7Z6M3 343 aa18.83■□□□□ 0.6
ARHGEF1-218ENST00000599589 FCGR1BQ92637 280 aa18.83■□□□□ 0.6
ARHGEF1-218ENST00000599589 FATE1Q969F0 183 aa18.83■□□□□ 0.6
ARHGEF1-218ENST00000599589 TMEM246Q9BRR3 403 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms