RNA–Protein interactions for RNA: ENST00000597354.1

CAPN12-206, Transcript of calpain 12, humanhuman

TSL 3

Gene CAPN12, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-206ENST00000597354 PCDHGA7Q9Y5G6 932 aa16.17■□□□□ 0.18
CAPN12-206ENST00000597354 ANKRD12Q6UB98 2062 aa16.17■□□□□ 0.18
CAPN12-206ENST00000597354 A0A087WUV0 522 aaPredicted RBP16.16■□□□□ 0.18
CAPN12-206ENST00000597354 A0A1W2PPV9 198 aa16.16■□□□□ 0.18
CAPN12-206ENST00000597354 PRICKLE3O43900 615 aaPredicted RBP16.16■□□□□ 0.18
CAPN12-206ENST00000597354 OAS2P29728 719 aaKnown RBP16.16■□□□□ 0.18
CAPN12-206ENST00000597354 MLLT3P42568 568 aaPredicted RBP16.16■□□□□ 0.18
CAPN12-206ENST00000597354 PCBP4P57723 403 aaKnown RBP16.16■□□□□ 0.18
CAPN12-206ENST00000597354 RAB15P59190 212 aa16.16■□□□□ 0.18
CAPN12-206ENST00000597354 TUBB3Q13509 450 aa16.16■□□□□ 0.18
CAPN12-206ENST00000597354 TGIF1Q15583 401 aa16.16■□□□□ 0.18
CAPN12-206ENST00000597354 SLC5A12Q1EHB4 618 aa16.16■□□□□ 0.18
CAPN12-206ENST00000597354 TMTC4Q5T4D3 741 aa16.16■□□□□ 0.18
CAPN12-206ENST00000597354 KIAA1614Q5VZ46 1190 aa16.16■□□□□ 0.18
CAPN12-206ENST00000597354 CEACAM20Q6UY09 585 aa16.16■□□□□ 0.18
CAPN12-206ENST00000597354 RAPH1Q70E73 1250 aa16.16■□□□□ 0.18
CAPN12-206ENST00000597354 KMT5CQ86Y97 462 aa16.16■□□□□ 0.18
CAPN12-206ENST00000597354 SYTL1Q8IYJ3 562 aa16.16■□□□□ 0.18
CAPN12-206ENST00000597354 FBXO15Q8NCQ5 510 aaPredicted RBP16.16■□□□□ 0.18
CAPN12-206ENST00000597354 ALKBH8Q96BT7 664 aaKnown RBP16.16■□□□□ 0.18
CAPN12-206ENST00000597354 DDA1Q9BW61 102 aa16.16■□□□□ 0.18
CAPN12-206ENST00000597354 FUT8Q9BYC5 575 aa16.16■□□□□ 0.18
CAPN12-206ENST00000597354 TWSG1Q9GZX9 223 aa16.16■□□□□ 0.18
CAPN12-206ENST00000597354 PARVBQ9HBI1 364 aa16.16■□□□□ 0.18
CAPN12-206ENST00000597354 FAM60AQ9NP50 221 aa16.16■□□□□ 0.18
CAPN12-206ENST00000597354 PDE7BQ9NP56 450 aa16.16■□□□□ 0.18
CAPN12-206ENST00000597354 FGF21Q9NSA1 209 aa16.16■□□□□ 0.18
CAPN12-206ENST00000597354 HMX2A2RU54 273 aa16.15■□□□□ 0.18
CAPN12-206ENST00000597354 SLC16A5O15375 505 aa16.15■□□□□ 0.18
CAPN12-206ENST00000597354 RIPK2O43353 540 aa16.15■□□□□ 0.18
CAPN12-206ENST00000597354 GUCA1CO95843 209 aa16.15■□□□□ 0.18
CAPN12-206ENST00000597354 CCDC166P0CW27 439 aa16.15■□□□□ 0.18
CAPN12-206ENST00000597354 ERGP11308 486 aa16.15■□□□□ 0.18
CAPN12-206ENST00000597354 ZNF28P17035 718 aa16.15■□□□□ 0.18
CAPN12-206ENST00000597354 MAGP20916 626 aa16.15■□□□□ 0.18
CAPN12-206ENST00000597354 IMPA1P29218 277 aa16.15■□□□□ 0.18
CAPN12-206ENST00000597354 EIF2S3P41091 472 aaKnown RBP16.15■□□□□ 0.18
CAPN12-206ENST00000597354 RAB10P61026 200 aa16.15■□□□□ 0.18
CAPN12-206ENST00000597354 ACACAQ13085 2346 aa16.15■□□□□ 0.18
CAPN12-206ENST00000597354 SP140Q13342 867 aa16.15■□□□□ 0.18
CAPN12-206ENST00000597354 DEFB110Q30KQ9 67 aa16.15■□□□□ 0.18
CAPN12-206ENST00000597354 CDHR3Q6ZTQ4 885 aa16.15■□□□□ 0.18
CAPN12-206ENST00000597354 TRMT10CQ7L0Y3 403 aaKnown RBP16.15■□□□□ 0.18
CAPN12-206ENST00000597354 CARFQ8N187 725 aa16.15■□□□□ 0.18
CAPN12-206ENST00000597354 C19orf47Q8N9M1 422 aaKnown RBP16.15■□□□□ 0.18
CAPN12-206ENST00000597354 SNIP1Q8TAD8 396 aaKnown RBP16.15■□□□□ 0.18
CAPN12-206ENST00000597354 HMGCLL1Q8TB92 370 aa16.15■□□□□ 0.18
CAPN12-206ENST00000597354 SLC44A1Q8WWI5 657 aa16.15■□□□□ 0.18
CAPN12-206ENST00000597354 SMPDL3AQ92484 453 aa16.15■□□□□ 0.18
CAPN12-206ENST00000597354 SLC22A18Q96BI1 424 aa16.15■□□□□ 0.18
CAPN12-206ENST00000597354 PDLIM5Q96HC4 596 aaKnown RBP16.15■□□□□ 0.18
CAPN12-206ENST00000597354 PAFAH2Q99487 392 aa16.15■□□□□ 0.18
CAPN12-206ENST00000597354 TXLNGYQ9BZA5 131 aa16.15■□□□□ 0.18
CAPN12-206ENST00000597354 ASPSCR1Q9BZE9 553 aa16.15■□□□□ 0.18
CAPN12-206ENST00000597354 ATG10Q9H0Y0 220 aa16.15■□□□□ 0.18
CAPN12-206ENST00000597354 POPDC3Q9HBV1 291 aa16.15■□□□□ 0.18
CAPN12-206ENST00000597354 STOX2Q9P2F5 926 aaPredicted RBP16.15■□□□□ 0.18
CAPN12-206ENST00000597354 BTRCQ9Y297 605 aa16.15■□□□□ 0.18
CAPN12-206ENST00000597354 PCDHB11Q9Y5F2 797 aa16.15■□□□□ 0.18
CAPN12-206ENST00000597354 PCDHGA3Q9Y5H0 932 aa16.15■□□□□ 0.18
CAPN12-206ENST00000597354 URB1O60287 2271 aaKnown RBP16.14■□□□□ 0.17
CAPN12-206ENST00000597354 TEX51A0A1B0GUA7 166 aa16.14■□□□□ 0.17
CAPN12-206ENST00000597354 PABPN1LA6NDY0 278 aaKnown RBP16.14■□□□□ 0.17
CAPN12-206ENST00000597354 SRRM3A6NNA2 597 aaPredicted RBP16.14■□□□□ 0.17
CAPN12-206ENST00000597354 E7ENX8 843 aa16.14■□□□□ 0.17
CAPN12-206ENST00000597354 MAP3K7O43318 606 aa16.14■□□□□ 0.17
CAPN12-206ENST00000597354 HCRTR1O43613 425 aa16.14■□□□□ 0.17
CAPN12-206ENST00000597354 WISP3O95389 354 aaPredicted RBP16.14■□□□□ 0.17
CAPN12-206ENST00000597354 TIAF1O95411 115 aa16.14■□□□□ 0.17
CAPN12-206ENST00000597354 INHBAP08476 426 aa16.14■□□□□ 0.17
CAPN12-206ENST00000597354 HIST1H2AGP0C0S8 130 aaPredicted RBP16.14■□□□□ 0.17
CAPN12-206ENST00000597354 HIST1H2ADP20671 130 aa16.14■□□□□ 0.17
CAPN12-206ENST00000597354 RPA3P35244 121 aaPredicted RBP16.14■□□□□ 0.17
CAPN12-206ENST00000597354 GRIA3P42263 894 aa16.14■□□□□ 0.17
CAPN12-206ENST00000597354 MSH2P43246 934 aa16.14■□□□□ 0.17
CAPN12-206ENST00000597354 VSNL1P62760 191 aa16.14■□□□□ 0.17
CAPN12-206ENST00000597354 ACY1Q03154 408 aa16.14■□□□□ 0.17
CAPN12-206ENST00000597354 TAP2Q03519 686 aa16.14■□□□□ 0.17
CAPN12-206ENST00000597354 ILF2Q12905 390 aaKnown RBP16.14■□□□□ 0.17
CAPN12-206ENST00000597354 CSHL1Q14406 222 aa16.14■□□□□ 0.17
CAPN12-206ENST00000597354 ARHGAP19Q14CB8 494 aa16.14■□□□□ 0.17
CAPN12-206ENST00000597354 TSNQ15631 228 aaKnown RBP16.14■□□□□ 0.17
CAPN12-206ENST00000597354 ZKSCAN8Q15776 578 aaPredicted RBP16.14■□□□□ 0.17
CAPN12-206ENST00000597354 THEMIS2Q5TEJ8 643 aa16.14■□□□□ 0.17
CAPN12-206ENST00000597354 SBSNQ6UWP8 590 aa16.14■□□□□ 0.17
CAPN12-206ENST00000597354 PPP1R3BQ86XI6 285 aa16.14■□□□□ 0.17
CAPN12-206ENST00000597354 ZNF248Q8NDW4 579 aa16.14■□□□□ 0.17
CAPN12-206ENST00000597354 OR2A1Q8NGT9 310 aa16.14■□□□□ 0.17
CAPN12-206ENST00000597354 KCNE4Q8WWG9 221 aa16.14■□□□□ 0.17
CAPN12-206ENST00000597354 ZNF501Q96CX3 271 aaPredicted RBP16.14■□□□□ 0.17
CAPN12-206ENST00000597354 MED8Q96G25 268 aa16.14■□□□□ 0.17
CAPN12-206ENST00000597354 HIST1H2AHQ96KK5 128 aa16.14■□□□□ 0.17
CAPN12-206ENST00000597354 CCDC138Q96M89 665 aa16.14■□□□□ 0.17
CAPN12-206ENST00000597354 HIST1H2AJQ99878 128 aa16.14■□□□□ 0.17
CAPN12-206ENST00000597354 H2AFJQ9BTM1 129 aa16.14■□□□□ 0.17
CAPN12-206ENST00000597354 ARL15Q9NXU5 204 aa16.14■□□□□ 0.17
CAPN12-206ENST00000597354 CTNNAL1Q9UBT7 734 aa16.14■□□□□ 0.17
CAPN12-206ENST00000597354 TAC3Q9UHF0 121 aa16.14■□□□□ 0.17
CAPN12-206ENST00000597354 RARRES3Q9UL19 164 aa16.14■□□□□ 0.17
CAPN12-206ENST00000597354 IKBKGQ9Y6K9 419 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms