RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 FAM87AP0C7U9 286 aa14.55□□□□□ -0.08
TRIM28-205ENST00000595028 MAGP20916 626 aa14.55□□□□□ -0.08
TRIM28-205ENST00000595028 RORAP35398 523 aa14.55□□□□□ -0.08
TRIM28-205ENST00000595028 ITGA8P53708 1063 aa14.55□□□□□ -0.08
TRIM28-205ENST00000595028 KLHL38Q2WGJ6 581 aa14.55□□□□□ -0.08
TRIM28-205ENST00000595028 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.55□□□□□ -0.08
TRIM28-205ENST00000595028 ATP1A1-AS1Q5TC04 95 aa14.55□□□□□ -0.08
TRIM28-205ENST00000595028 C16orf46Q6P387 395 aa14.55□□□□□ -0.08
TRIM28-205ENST00000595028 NEK10Q6ZWH5 1172 aa14.55□□□□□ -0.08
TRIM28-205ENST00000595028 IGDCC3Q8IVU1 814 aa14.55□□□□□ -0.08
TRIM28-205ENST00000595028 CNTN4Q8IWV2 1026 aa14.55□□□□□ -0.08
TRIM28-205ENST00000595028 FAM20CQ8IXL6 584 aa14.55□□□□□ -0.08
TRIM28-205ENST00000595028 DSELQ8IZU8 1212 aa14.55□□□□□ -0.08
TRIM28-205ENST00000595028 C2orf73Q8N5S3 287 aaPredicted RBP14.55□□□□□ -0.08
TRIM28-205ENST00000595028 C2CD4AQ8NCU7 369 aaPredicted RBP14.55□□□□□ -0.08
TRIM28-205ENST00000595028 MAGEC3Q8TD91 643 aa14.55□□□□□ -0.08
TRIM28-205ENST00000595028 MR1Q95460 341 aa14.55□□□□□ -0.08
TRIM28-205ENST00000595028 SNF8Q96H20 258 aa14.55□□□□□ -0.08
TRIM28-205ENST00000595028 RUFY1Q96T51 708 aa14.55□□□□□ -0.08
TRIM28-205ENST00000595028 KRT12Q99456 494 aa14.55□□□□□ -0.08
TRIM28-205ENST00000595028 SLC30A3Q99726 388 aa14.55□□□□□ -0.08
TRIM28-205ENST00000595028 WDR83Q9BRX9 315 aaKnown RBP14.55□□□□□ -0.08
TRIM28-205ENST00000595028 PLAC1Q9HBJ0 212 aa14.55□□□□□ -0.08
TRIM28-205ENST00000595028 PCMTD2Q9NV79 361 aa14.55□□□□□ -0.08
TRIM28-205ENST00000595028 KLHL42Q9P2K6 505 aa14.55□□□□□ -0.08
TRIM28-205ENST00000595028 SERTAD3Q9UJW9 196 aa14.55□□□□□ -0.08
TRIM28-205ENST00000595028 CHMP2BQ9UQN3 213 aa14.55□□□□□ -0.08
TRIM28-205ENST00000595028 H3BMH7 237 aa14.54□□□□□ -0.08
TRIM28-205ENST00000595028 MYO1CO00159 1063 aa14.54□□□□□ -0.08
TRIM28-205ENST00000595028 MEN1O00255 615 aa14.54□□□□□ -0.08
TRIM28-205ENST00000595028 TP73O15350 636 aa14.54□□□□□ -0.08
TRIM28-205ENST00000595028 SUV39H1O43463 412 aa14.54□□□□□ -0.08
TRIM28-205ENST00000595028 HCRTR1O43613 425 aa14.54□□□□□ -0.08
TRIM28-205ENST00000595028 PSIP1O75475 530 aaKnown RBP14.54□□□□□ -0.08
TRIM28-205ENST00000595028 OR2B3O76000 313 aa14.54□□□□□ -0.08
TRIM28-205ENST00000595028 FKBP9O95302 570 aa14.54□□□□□ -0.08
TRIM28-205ENST00000595028 ERVK-10P10266 1014 aa14.54□□□□□ -0.08
TRIM28-205ENST00000595028 ENO3P13929 434 aaPredicted RBP14.54□□□□□ -0.08
TRIM28-205ENST00000595028 ELK3P41970 407 aa14.54□□□□□ -0.08
TRIM28-205ENST00000595028 CUL1Q13616 776 aa14.54□□□□□ -0.08
TRIM28-205ENST00000595028 HIF1AQ16665 826 aa14.54□□□□□ -0.08
TRIM28-205ENST00000595028 FAM199XQ6PEV8 388 aaPredicted RBP14.54□□□□□ -0.08
TRIM28-205ENST00000595028 FAM198BQ6UWH4 519 aa14.54□□□□□ -0.08
TRIM28-205ENST00000595028 SYTL1Q8IYJ3 562 aa14.54□□□□□ -0.08
TRIM28-205ENST00000595028 GPR135Q8IZ08 494 aa14.54□□□□□ -0.08
TRIM28-205ENST00000595028 GABPB2Q8TAK5 448 aaPredicted RBP14.54□□□□□ -0.08
TRIM28-205ENST00000595028 CD200R1Q8TD46 325 aa14.54□□□□□ -0.08
TRIM28-205ENST00000595028 N4BP2L2Q92802 583 aaPredicted RBP14.54□□□□□ -0.08
TRIM28-205ENST00000595028 CLIP3Q96DZ5 547 aa14.54□□□□□ -0.08
TRIM28-205ENST00000595028 CERS2Q96G23 380 aa14.54□□□□□ -0.08
TRIM28-205ENST00000595028 PWWP2AQ96N64 755 aa14.54□□□□□ -0.08
TRIM28-205ENST00000595028 GPR21Q99679 349 aa14.54□□□□□ -0.08
TRIM28-205ENST00000595028 AARSD1Q9BTE6 412 aaKnown RBP14.54□□□□□ -0.08
TRIM28-205ENST00000595028 GPR87Q9BY21 358 aa14.54□□□□□ -0.08
TRIM28-205ENST00000595028 TRIM31Q9BZY9 425 aa14.54□□□□□ -0.08
TRIM28-205ENST00000595028 CHST8Q9H2A9 424 aa14.54□□□□□ -0.08
TRIM28-205ENST00000595028 ACTL8Q9H568 366 aa14.54□□□□□ -0.08
TRIM28-205ENST00000595028 STARD5Q9NSY2 213 aa14.54□□□□□ -0.08
TRIM28-205ENST00000595028 INTS7Q9NVH2 962 aaKnown RBP14.54□□□□□ -0.08
TRIM28-205ENST00000595028 KLHL20Q9Y2M5 609 aa14.54□□□□□ -0.08
TRIM28-205ENST00000595028 HEATR5BQ9P2D3 2071 aa14.53□□□□□ -0.08
TRIM28-205ENST00000595028 EFCAB8A8MWE9 144 aa14.53□□□□□ -0.08
TRIM28-205ENST00000595028 ZNF749O43361 778 aa14.53□□□□□ -0.08
TRIM28-205ENST00000595028 PRICKLE3O43900 615 aaPredicted RBP14.53□□□□□ -0.08
TRIM28-205ENST00000595028 VPS26AO75436 327 aa14.53□□□□□ -0.08
TRIM28-205ENST00000595028 CREG1O75629 220 aa14.53□□□□□ -0.08
TRIM28-205ENST00000595028 HAUS5O94927 633 aa14.53□□□□□ -0.08
TRIM28-205ENST00000595028 RECKO95980 971 aa14.53□□□□□ -0.08
TRIM28-205ENST00000595028 CATP04040 527 aaKnown RBP14.53□□□□□ -0.08
TRIM28-205ENST00000595028 KLK3P07288 261 aaPredicted RBP14.53□□□□□ -0.08
TRIM28-205ENST00000595028 HBQ1P09105 142 aa14.53□□□□□ -0.08
TRIM28-205ENST00000595028 ERGP11308 486 aa14.53□□□□□ -0.08
TRIM28-205ENST00000595028 PSMB5P28074 263 aa14.53□□□□□ -0.08
TRIM28-205ENST00000595028 PTPN4P29074 926 aa14.53□□□□□ -0.08
TRIM28-205ENST00000595028 CCR10P46092 362 aa14.53□□□□□ -0.08
TRIM28-205ENST00000595028 POLE2P56282 527 aa14.53□□□□□ -0.08
TRIM28-205ENST00000595028 ARL4CP56559 192 aa14.53□□□□□ -0.08
TRIM28-205ENST00000595028 ETF1P62495 437 aaKnown RBP14.53□□□□□ -0.08
TRIM28-205ENST00000595028 UBAP2LQ14157 1087 aaKnown RBP14.53□□□□□ -0.08
TRIM28-205ENST00000595028 CYP2A13Q16696 494 aa14.53□□□□□ -0.08
TRIM28-205ENST00000595028 DEFB109BQ30KR1 87 aa14.53□□□□□ -0.08
TRIM28-205ENST00000595028 STEAP4Q687X5 459 aa14.53□□□□□ -0.08
TRIM28-205ENST00000595028 KIAA0408Q6ZU52 694 aa14.53□□□□□ -0.08
TRIM28-205ENST00000595028 DNAJC22Q8N4W6 341 aa14.53□□□□□ -0.08
TRIM28-205ENST00000595028 OR9A1PQ8NGU1 263 aa14.53□□□□□ -0.08
TRIM28-205ENST00000595028 INPP5DQ92835 1189 aa14.53□□□□□ -0.08
TRIM28-205ENST00000595028 LRRC39Q96DD0 335 aa14.53□□□□□ -0.08
TRIM28-205ENST00000595028 CFAP36Q96G28 342 aa14.53□□□□□ -0.08
TRIM28-205ENST00000595028 ADNPQ9H2P0 1102 aa14.53□□□□□ -0.08
TRIM28-205ENST00000595028 FAM114A2Q9NRY5 505 aa14.53□□□□□ -0.08
TRIM28-205ENST00000595028 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.53□□□□□ -0.08
TRIM28-205ENST00000595028 ZC3H7BQ9UGR2 993 aaKnown RBP14.53□□□□□ -0.08
TRIM28-205ENST00000595028 PLCL2Q9UPR0 1127 aa14.53□□□□□ -0.08
TRIM28-205ENST00000595028 DHRS7Q9Y394 339 aa14.53□□□□□ -0.08
TRIM28-205ENST00000595028 TEX264Q9Y6I9 313 aa14.53□□□□□ -0.08
TRIM28-205ENST00000595028 AP1M2Q9Y6Q5 423 aa14.53□□□□□ -0.08
TRIM28-205ENST00000595028 PCM1Q15154 2024 aa14.53□□□□□ -0.08
TRIM28-205ENST00000595028 A0A1W2PPV9 198 aa14.52□□□□□ -0.09
TRIM28-205ENST00000595028 CDC14CA4D256 554 aa14.52□□□□□ -0.09
TRIM28-205ENST00000595028 EIF3FO00303 357 aaPredicted RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms