RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 RPS14P62263 151 aaKnown RBP16.09■□□□□ 0.17
LIG1-206ENST00000594067 TAF12Q16514 161 aa16.09■□□□□ 0.17
LIG1-206ENST00000594067 BCL2A1Q16548 175 aa16.09■□□□□ 0.17
LIG1-206ENST00000594067 SMU1Q2TAY7 513 aa16.09■□□□□ 0.17
LIG1-206ENST00000594067 ATG9BQ674R7 924 aa16.09■□□□□ 0.17
LIG1-206ENST00000594067 CES5AQ6NT32 575 aa16.09■□□□□ 0.17
LIG1-206ENST00000594067 GALNT5Q7Z7M9 940 aa16.09■□□□□ 0.17
LIG1-206ENST00000594067 SAPCD2Q86UD0 394 aa16.09■□□□□ 0.17
LIG1-206ENST00000594067 DCP2Q8IU60 420 aaKnown RBP16.09■□□□□ 0.17
LIG1-206ENST00000594067 ARL10Q8N8L6 244 aa16.09■□□□□ 0.17
LIG1-206ENST00000594067 MINDY2Q8NBR6 621 aa16.09■□□□□ 0.17
LIG1-206ENST00000594067 OR7A2PQ8NGA2 310 aa16.09■□□□□ 0.17
LIG1-206ENST00000594067 USP7Q93009 1102 aa16.09■□□□□ 0.17
LIG1-206ENST00000594067 TSSK3Q96PN8 268 aa16.09■□□□□ 0.17
LIG1-206ENST00000594067 CPPED1Q9BRF8 314 aaPredicted RBP16.09■□□□□ 0.17
LIG1-206ENST00000594067 PARVBQ9HBI1 364 aa16.09■□□□□ 0.17
LIG1-206ENST00000594067 SERHLQ9NQF3 203 aa16.09■□□□□ 0.17
LIG1-206ENST00000594067 SACM1LQ9NTJ5 587 aa16.09■□□□□ 0.17
LIG1-206ENST00000594067 VNN3Q9NY84 501 aa16.09■□□□□ 0.17
LIG1-206ENST00000594067 TMEFF2Q9UIK5 374 aaPredicted RBP16.09■□□□□ 0.17
LIG1-206ENST00000594067 FBXO10Q9UK96 956 aa16.09■□□□□ 0.17
LIG1-206ENST00000594067 GLYATL1P3A0A0U1RQE8 302 aa16.08■□□□□ 0.16
LIG1-206ENST00000594067 FAM220BPB1ANY3 271 aa16.08■□□□□ 0.16
LIG1-206ENST00000594067 RETP07949 1114 aa16.08■□□□□ 0.16
LIG1-206ENST00000594067 GSTT2P0CG29 244 aa16.08■□□□□ 0.16
LIG1-206ENST00000594067 GSTT2BP0CG30 244 aa16.08■□□□□ 0.16
LIG1-206ENST00000594067 COL6A1P12109 1028 aa16.08■□□□□ 0.16
LIG1-206ENST00000594067 S100A3P33764 101 aa16.08■□□□□ 0.16
LIG1-206ENST00000594067 CDKN2CP42773 168 aa16.08■□□□□ 0.16
LIG1-206ENST00000594067 GZMMP51124 257 aa16.08■□□□□ 0.16
LIG1-206ENST00000594067 IL1RL1Q01638 556 aa16.08■□□□□ 0.16
LIG1-206ENST00000594067 INAVAQ3KP66 663 aa16.08■□□□□ 0.16
LIG1-206ENST00000594067 AGAP7PQ5VUJ5 663 aa16.08■□□□□ 0.16
LIG1-206ENST00000594067 LRRC8DQ7L1W4 858 aa16.08■□□□□ 0.16
LIG1-206ENST00000594067 CALHM3Q86XJ0 350 aa16.08■□□□□ 0.16
LIG1-206ENST00000594067 SLC22A15Q8IZD6 547 aa16.08■□□□□ 0.16
LIG1-206ENST00000594067 OR52E4Q8NGH9 312 aa16.08■□□□□ 0.16
LIG1-206ENST00000594067 OVCA2Q8WZ82 227 aa16.08■□□□□ 0.16
LIG1-206ENST00000594067 BARD1Q99728 777 aaKnown RBP16.08■□□□□ 0.16
LIG1-206ENST00000594067 HERC2P3Q9BVR0 1158 aa16.08■□□□□ 0.16
LIG1-206ENST00000594067 ALOXE3Q9BYJ1 711 aa16.08■□□□□ 0.16
LIG1-206ENST00000594067 AASSQ9UDR5 926 aa16.08■□□□□ 0.16
LIG1-206ENST00000594067 OR51B4Q9Y5P0 310 aa16.08■□□□□ 0.16
LIG1-206ENST00000594067 PMF1-BGLAPU3KQ54 211 aa16.08■□□□□ 0.16
LIG1-206ENST00000594067 LRATO95237 230 aa16.08■□□□□ 0.16
LIG1-206ENST00000594067 TRBC1P01850 177 aa16.08■□□□□ 0.16
LIG1-206ENST00000594067 SLC10A3P09131 477 aa16.08■□□□□ 0.16
LIG1-206ENST00000594067 CCDC159P0C7I6 412 aa16.08■□□□□ 0.16
LIG1-206ENST00000594067 TACR1P25103 407 aa16.08■□□□□ 0.16
LIG1-206ENST00000594067 RYKP34925 604 aa16.08■□□□□ 0.16
LIG1-206ENST00000594067 SMAD3P84022 425 aaKnown RBP16.08■□□□□ 0.16
LIG1-206ENST00000594067 IL5RAQ01344 420 aa16.08■□□□□ 0.16
LIG1-206ENST00000594067 CDK5R2Q13319 367 aa16.08■□□□□ 0.16
LIG1-206ENST00000594067 DNASE1L3Q13609 305 aa16.08■□□□□ 0.16
LIG1-206ENST00000594067 PGS1Q32NB8 556 aa16.08■□□□□ 0.16
LIG1-206ENST00000594067 PAGE2BQ5JRK9 111 aa16.08■□□□□ 0.16
LIG1-206ENST00000594067 GALNT13Q8IUC8 556 aa16.08■□□□□ 0.16
LIG1-206ENST00000594067 PLPP6Q8IY26 295 aa16.08■□□□□ 0.16
LIG1-206ENST00000594067 APCDD1Q8J025 514 aa16.08■□□□□ 0.16
LIG1-206ENST00000594067 NDNFQ8TB73 568 aa16.08■□□□□ 0.16
LIG1-206ENST00000594067 UBTD2Q8WUN7 234 aa16.08■□□□□ 0.16
LIG1-206ENST00000594067 PYURFQ96I23 114 aa16.08■□□□□ 0.16
LIG1-206ENST00000594067 TNKS2Q9H2K2 1166 aa16.08■□□□□ 0.16
LIG1-206ENST00000594067 ASIC5Q9NY37 505 aa16.08■□□□□ 0.16
LIG1-206ENST00000594067 BCKDKO14874 412 aa16.07■□□□□ 0.16
LIG1-206ENST00000594067 CA12O43570 354 aa16.07■□□□□ 0.16
LIG1-206ENST00000594067 ERN1O75460 977 aaKnown RBP16.07■□□□□ 0.16
LIG1-206ENST00000594067 CLDN9O95484 217 aa16.07■□□□□ 0.16
LIG1-206ENST00000594067 C1QCP02747 245 aa16.07■□□□□ 0.16
LIG1-206ENST00000594067 FTH1P02794 183 aa16.07■□□□□ 0.16
LIG1-206ENST00000594067 ALOX5P09917 674 aa16.07■□□□□ 0.16
LIG1-206ENST00000594067 BMP4P12644 408 aa16.07■□□□□ 0.16
LIG1-206ENST00000594067 CD6P30203 668 aa16.07■□□□□ 0.16
LIG1-206ENST00000594067 AP1S1P61966 158 aa16.07■□□□□ 0.16
LIG1-206ENST00000594067 BCL2L1Q07817 233 aa16.07■□□□□ 0.16
LIG1-206ENST00000594067 CDH18Q13634 790 aa16.07■□□□□ 0.16
LIG1-206ENST00000594067 RAPSNQ13702 412 aa16.07■□□□□ 0.16
LIG1-206ENST00000594067 INAQ16352 499 aa16.07■□□□□ 0.16
LIG1-206ENST00000594067 SLC8B1Q6J4K2 584 aa16.07■□□□□ 0.16
LIG1-206ENST00000594067 FKBP9P1Q75LS8 142 aa16.07■□□□□ 0.16
LIG1-206ENST00000594067 TSPAN33Q86UF1 283 aa16.07■□□□□ 0.16
LIG1-206ENST00000594067 SCAIQ8N9R8 606 aa16.07■□□□□ 0.16
LIG1-206ENST00000594067 FBLIM1Q8WUP2 373 aa16.07■□□□□ 0.16
LIG1-206ENST00000594067 SELENOMQ8WWX9 145 aa16.07■□□□□ 0.16
LIG1-206ENST00000594067 SLX1AQ9BQ83 275 aa16.07■□□□□ 0.16
LIG1-206ENST00000594067 YIPF2Q9BWQ6 316 aa16.07■□□□□ 0.16
LIG1-206ENST00000594067 KCNH6Q9H252 994 aa16.07■□□□□ 0.16
LIG1-206ENST00000594067 ELAC1Q9H777 363 aaKnown RBP16.07■□□□□ 0.16
LIG1-206ENST00000594067 FBXO8Q9NRD0 319 aa16.07■□□□□ 0.16
LIG1-206ENST00000594067 GPRC5BQ9NZH0 403 aa16.07■□□□□ 0.16
LIG1-206ENST00000594067 TMED5Q9Y3A6 229 aa16.07■□□□□ 0.16
LIG1-206ENST00000594067 TRBV5-4A0A0C4DH59 114 aa16.07■□□□□ 0.16
LIG1-206ENST00000594067 SLC22A1O15245 554 aa16.07■□□□□ 0.16
LIG1-206ENST00000594067 SLC16A6O15403 523 aa16.07■□□□□ 0.16
LIG1-206ENST00000594067 KRT6AP02538 564 aa16.07■□□□□ 0.16
LIG1-206ENST00000594067 KRT6BP04259 564 aa16.07■□□□□ 0.16
LIG1-206ENST00000594067 EPORP19235 508 aa16.07■□□□□ 0.16
LIG1-206ENST00000594067 KRT6CP48668 564 aa16.07■□□□□ 0.16
LIG1-206ENST00000594067 SLC14A1Q13336 389 aa16.07■□□□□ 0.16
LIG1-206ENST00000594067 ZNF362Q5T0B9 420 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms