RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 FKBP10Q96AY3 582 aa14.16□□□□□ -0.14
PNKP-202ENST00000593706 KCNF1Q9H3M0 494 aa14.16□□□□□ -0.14
PNKP-202ENST00000593706 SLC6A20Q9NP91 592 aa14.16□□□□□ -0.14
PNKP-202ENST00000593706 RAB6BQ9NRW1 208 aa14.16□□□□□ -0.14
PNKP-202ENST00000593706 EURLQ9NYK6 297 aa14.16□□□□□ -0.14
PNKP-202ENST00000593706 NOVA2Q9UNW9 492 aaKnown RBP14.16□□□□□ -0.14
PNKP-202ENST00000593706 DRG1Q9Y295 367 aaKnown RBP14.16□□□□□ -0.14
PNKP-202ENST00000593706 A0A1B0GX78 115 aa14.15□□□□□ -0.14
PNKP-202ENST00000593706 SLC5A10A0PJK1 596 aa14.15□□□□□ -0.14
PNKP-202ENST00000593706 GAS8O95995 478 aa14.15□□□□□ -0.14
PNKP-202ENST00000593706 RPN2P04844 631 aa14.15□□□□□ -0.14
PNKP-202ENST00000593706 TPBGLP0DKB5 382 aa14.15□□□□□ -0.14
PNKP-202ENST00000593706 PIM1P11309 404 aaPredicted RBP14.15□□□□□ -0.14
PNKP-202ENST00000593706 MMP11P24347 488 aa14.15□□□□□ -0.14
PNKP-202ENST00000593706 PKLRP30613 574 aa14.15□□□□□ -0.14
PNKP-202ENST00000593706 CXCR5P32302 372 aa14.15□□□□□ -0.14
PNKP-202ENST00000593706 RAB28P51157 221 aa14.15□□□□□ -0.14
PNKP-202ENST00000593706 ARSFP54793 590 aa14.15□□□□□ -0.14
PNKP-202ENST00000593706 CDH17Q12864 832 aa14.15□□□□□ -0.14
PNKP-202ENST00000593706 CCDC38Q502W7 563 aa14.15□□□□□ -0.14
PNKP-202ENST00000593706 PRAMEF13Q5VWM6 474 aa14.15□□□□□ -0.14
PNKP-202ENST00000593706 TAX1BP1Q86VP1 789 aa14.15□□□□□ -0.14
PNKP-202ENST00000593706 TMEM151BQ8IW70 566 aa14.15□□□□□ -0.14
PNKP-202ENST00000593706 REXO1L1PQ8IX06 675 aa14.15□□□□□ -0.14
PNKP-202ENST00000593706 FAM20CQ8IXL6 584 aa14.15□□□□□ -0.14
PNKP-202ENST00000593706 DNAJC22Q8N4W6 341 aa14.15□□□□□ -0.14
PNKP-202ENST00000593706 PRELID2Q8N945 189 aa14.15□□□□□ -0.14
PNKP-202ENST00000593706 ST6GALNAC3Q8NDV1 305 aa14.15□□□□□ -0.14
PNKP-202ENST00000593706 PPP4R1Q8TF05 950 aa14.15□□□□□ -0.14
PNKP-202ENST00000593706 CNDP1Q96KN2 507 aa14.15□□□□□ -0.14
PNKP-202ENST00000593706 TTC1Q99614 292 aa14.15□□□□□ -0.14
PNKP-202ENST00000593706 TSSK1BQ9BXA7 367 aa14.15□□□□□ -0.14
PNKP-202ENST00000593706 WDR54Q9H977 334 aa14.15□□□□□ -0.14
PNKP-202ENST00000593706 EIF2B3Q9NR50 452 aaKnown RBP14.15□□□□□ -0.14
PNKP-202ENST00000593706 INTS7Q9NVH2 962 aaKnown RBP14.15□□□□□ -0.14
PNKP-202ENST00000593706 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.15□□□□□ -0.14
PNKP-202ENST00000593706 PAK5Q9P286 719 aa14.15□□□□□ -0.14
PNKP-202ENST00000593706 RIMKLBQ9ULI2 386 aa14.15□□□□□ -0.14
PNKP-202ENST00000593706 KLHL20Q9Y2M5 609 aa14.15□□□□□ -0.14
PNKP-202ENST00000593706 CSAG2Q9Y5P2 127 aa14.15□□□□□ -0.14
PNKP-202ENST00000593706 CCDC162PA2VCL2 907 aa14.14□□□□□ -0.15
PNKP-202ENST00000593706 BHMG1C9JSJ3 638 aaPredicted RBP14.14□□□□□ -0.15
PNKP-202ENST00000593706 FOXN2P32314 431 aa14.14□□□□□ -0.15
PNKP-202ENST00000593706 PER3P56645 1201 aa14.14□□□□□ -0.15
PNKP-202ENST00000593706 CDC16Q13042 620 aa14.14□□□□□ -0.15
PNKP-202ENST00000593706 TUBB8Q3ZCM7 444 aa14.14□□□□□ -0.15
PNKP-202ENST00000593706 DNAJC21Q5F1R6 531 aaKnown RBP14.14□□□□□ -0.15
PNKP-202ENST00000593706 AGAP7PQ5VUJ5 663 aa14.14□□□□□ -0.15
PNKP-202ENST00000593706 RASGEF1CQ8N431 466 aa14.14□□□□□ -0.15
PNKP-202ENST00000593706 C2orf73Q8N5S3 287 aaPredicted RBP14.14□□□□□ -0.15
PNKP-202ENST00000593706 CCDC89Q8N998 374 aa14.14□□□□□ -0.15
PNKP-202ENST00000593706 DNAAF3Q8N9W5 541 aa14.14□□□□□ -0.15
PNKP-202ENST00000593706 CFAP61Q8NHU2 1237 aa14.14□□□□□ -0.15
PNKP-202ENST00000593706 NACC2Q96BF6 587 aa14.14□□□□□ -0.15
PNKP-202ENST00000593706 ZNF778Q96MU6 729 aa14.14□□□□□ -0.15
PNKP-202ENST00000593706 AGAP4Q96P64 663 aa14.14□□□□□ -0.15
PNKP-202ENST00000593706 EPS8L2Q9H6S3 715 aa14.14□□□□□ -0.15
PNKP-202ENST00000593706 MRM3Q9HC36 420 aaKnown RBP14.14□□□□□ -0.15
PNKP-202ENST00000593706 SLC22A11Q9NSA0 550 aa14.14□□□□□ -0.15
PNKP-202ENST00000593706 SLC2A6Q9UGQ3 507 aa14.14□□□□□ -0.15
PNKP-202ENST00000593706 CIDEBQ9UHD4 219 aa14.14□□□□□ -0.15
PNKP-202ENST00000593706 SCN2AQ99250 2005 aa14.14□□□□□ -0.15
PNKP-202ENST00000593706 CSMD2Q7Z408 3487 aa14.13□□□□□ -0.15
PNKP-202ENST00000593706 DSCR3O14972 297 aa14.13□□□□□ -0.15
PNKP-202ENST00000593706 CEP104O60308 925 aa14.13□□□□□ -0.15
PNKP-202ENST00000593706 OR1I1O60431 355 aa14.13□□□□□ -0.15
PNKP-202ENST00000593706 APRTP07741 180 aa14.13□□□□□ -0.15
PNKP-202ENST00000593706 ITGAXP20702 1163 aa14.13□□□□□ -0.15
PNKP-202ENST00000593706 HSPA14Q0VDF9 509 aa14.13□□□□□ -0.15
PNKP-202ENST00000593706 ZNF169Q14929 603 aaPredicted RBP14.13□□□□□ -0.15
PNKP-202ENST00000593706 RBBP7Q16576 425 aa14.13□□□□□ -0.15
PNKP-202ENST00000593706 NKG7Q16617 165 aa14.13□□□□□ -0.15
PNKP-202ENST00000593706 CRB2Q5IJ48 1285 aa14.13□□□□□ -0.15
PNKP-202ENST00000593706 AFTPHQ6ULP2 937 aa14.13□□□□□ -0.15
PNKP-202ENST00000593706 SHISA6Q6ZSJ9 500 aa14.13□□□□□ -0.15
PNKP-202ENST00000593706 ZNF534Q76KX8 674 aa14.13□□□□□ -0.15
PNKP-202ENST00000593706 OVCH1Q7RTY7 1134 aa14.13□□□□□ -0.15
PNKP-202ENST00000593706 MCATQ8IVS2 390 aaKnown RBP14.13□□□□□ -0.15
PNKP-202ENST00000593706 DCUN1D3Q8IWE4 304 aa14.13□□□□□ -0.15
PNKP-202ENST00000593706 SLC22A15Q8IZD6 547 aa14.13□□□□□ -0.15
PNKP-202ENST00000593706 METTL27Q8N6F8 245 aaPredicted RBP14.13□□□□□ -0.15
PNKP-202ENST00000593706 TTC29Q8NA56 475 aaPredicted RBP14.13□□□□□ -0.15
PNKP-202ENST00000593706 LINC01555Q8NAE3 123 aa14.13□□□□□ -0.15
PNKP-202ENST00000593706 DNAJB14Q8TBM8 379 aa14.13□□□□□ -0.15
PNKP-202ENST00000593706 COG1Q8WTW3 980 aa14.13□□□□□ -0.15
PNKP-202ENST00000593706 MAIP1Q8WWC4 291 aa14.13□□□□□ -0.15
PNKP-202ENST00000593706 SLC22A18Q96BI1 424 aa14.13□□□□□ -0.15
PNKP-202ENST00000593706 VPS50Q96JG6 964 aa14.13□□□□□ -0.15
PNKP-202ENST00000593706 BARD1Q99728 777 aaKnown RBP14.13□□□□□ -0.15
PNKP-202ENST00000593706 SOX17Q9H6I2 414 aaPredicted RBP14.13□□□□□ -0.15
PNKP-202ENST00000593706 CUTCQ9NTM9 273 aa14.13□□□□□ -0.15
PNKP-202ENST00000593706 CTSFQ9UBX1 484 aa14.13□□□□□ -0.15
PNKP-202ENST00000593706 NXT1Q9UKK6 140 aaKnown RBP14.13□□□□□ -0.15
PNKP-202ENST00000593706 TTC7AQ9ULT0 858 aaPredicted RBP14.13□□□□□ -0.15
PNKP-202ENST00000593706 TACC2O95359 2948 aa14.13□□□□□ -0.15
PNKP-202ENST00000593706 PCNX1Q96RV3 2341 aa14.13□□□□□ -0.15
PNKP-202ENST00000593706 HEATR9A2RTY3 570 aa14.12□□□□□ -0.15
PNKP-202ENST00000593706 SOCS6O14544 535 aa14.12□□□□□ -0.15
PNKP-202ENST00000593706 LRRTM2O43300 516 aa14.12□□□□□ -0.15
PNKP-202ENST00000593706 NRDCO43847 1150 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms