RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 OR9A1PQ8NGU1 263 aa13.08□□□□□ -0.32
VMP1-217ENST00000593168 DNASE2BQ8WZ79 361 aa13.08□□□□□ -0.32
VMP1-217ENST00000593168 TSACCQ96A04 125 aaPredicted RBP13.08□□□□□ -0.32
VMP1-217ENST00000593168 SKA1Q96BD8 255 aa13.08□□□□□ -0.32
VMP1-217ENST00000593168 RMDN2Q96LZ7 410 aa13.08□□□□□ -0.32
VMP1-217ENST00000593168 SLC6A18Q96N87 628 aa13.08□□□□□ -0.32
VMP1-217ENST00000593168 PKP4Q99569 1192 aa13.08□□□□□ -0.32
VMP1-217ENST00000593168 SHCBP1LQ9BZQ2 653 aa13.08□□□□□ -0.32
VMP1-217ENST00000593168 SEMA4BQ9NPR2 832 aaPredicted RBP13.08□□□□□ -0.32
VMP1-217ENST00000593168 AASDHPPTQ9NRN7 309 aa13.08□□□□□ -0.32
VMP1-217ENST00000593168 STOX2Q9P2F5 926 aaPredicted RBP13.08□□□□□ -0.32
VMP1-217ENST00000593168 PCOLCE2Q9UKZ9 415 aa13.08□□□□□ -0.32
VMP1-217ENST00000593168 KCNK6Q9Y257 313 aa13.08□□□□□ -0.32
VMP1-217ENST00000593168 ASF1AQ9Y294 204 aa13.08□□□□□ -0.32
VMP1-217ENST00000593168 PLEKHM1Q9Y4G2 1056 aa13.08□□□□□ -0.32
VMP1-217ENST00000593168 ANGPTL3Q9Y5C1 460 aa13.08□□□□□ -0.32
VMP1-217ENST00000593168 ZFC3H1O60293 1989 aaKnown RBP13.08□□□□□ -0.32
VMP1-217ENST00000593168 GON4LQ3T8J9 2241 aa13.07□□□□□ -0.32
VMP1-217ENST00000593168 A0A1W2PR77 199 aa13.07□□□□□ -0.32
VMP1-217ENST00000593168 TRPC5OSA6NMA1 111 aa13.07□□□□□ -0.32
VMP1-217ENST00000593168 MEI4A8MW99 385 aa13.07□□□□□ -0.32
VMP1-217ENST00000593168 AZIN1O14977 448 aa13.07□□□□□ -0.32
VMP1-217ENST00000593168 CCNT2O60583 730 aaKnown RBP13.07□□□□□ -0.32
VMP1-217ENST00000593168 KATNA1O75449 491 aa13.07□□□□□ -0.32
VMP1-217ENST00000593168 RASGRP1O95267 797 aa13.07□□□□□ -0.32
VMP1-217ENST00000593168 OTCP00480 354 aa13.07□□□□□ -0.32
VMP1-217ENST00000593168 CFIP05156 583 aa13.07□□□□□ -0.32
VMP1-217ENST00000593168 EPB42P16452 691 aa13.07□□□□□ -0.32
VMP1-217ENST00000593168 CD38P28907 300 aa13.07□□□□□ -0.32
VMP1-217ENST00000593168 HSD17B2P37059 387 aa13.07□□□□□ -0.32
VMP1-217ENST00000593168 GDF5P43026 501 aa13.07□□□□□ -0.32
VMP1-217ENST00000593168 IDH3AP50213 366 aa13.07□□□□□ -0.32
VMP1-217ENST00000593168 BLKP51451 505 aa13.07□□□□□ -0.32
VMP1-217ENST00000593168 CTBSQ01459 385 aa13.07□□□□□ -0.32
VMP1-217ENST00000593168 EIF2B5Q13144 721 aaKnown RBP13.07□□□□□ -0.32
VMP1-217ENST00000593168 FZD2Q14332 565 aa13.07□□□□□ -0.32
VMP1-217ENST00000593168 RBBP7Q16576 425 aa13.07□□□□□ -0.32
VMP1-217ENST00000593168 PTCHD3Q3KNS1 767 aa13.07□□□□□ -0.32
VMP1-217ENST00000593168 CCSMST1Q4G0I0 132 aa13.07□□□□□ -0.32
VMP1-217ENST00000593168 AGTRAPQ6RW13 159 aa13.07□□□□□ -0.32
VMP1-217ENST00000593168 ABRAXAS1Q6UWZ7 409 aa13.07□□□□□ -0.32
VMP1-217ENST00000593168 GPRIN3Q6ZVF9 776 aa13.07□□□□□ -0.32
VMP1-217ENST00000593168 RD3Q7Z3Z2 195 aa13.07□□□□□ -0.32
VMP1-217ENST00000593168 HID1Q8IV36 788 aa13.07□□□□□ -0.32
VMP1-217ENST00000593168 TBC1D21Q8IYX1 336 aa13.07□□□□□ -0.32
VMP1-217ENST00000593168 RGL4Q8IZJ4 473 aa13.07□□□□□ -0.32
VMP1-217ENST00000593168 DEFB119Q8N690 84 aa13.07□□□□□ -0.32
VMP1-217ENST00000593168 OR2I1PQ8NGU4 316 aa13.07□□□□□ -0.32
VMP1-217ENST00000593168 OR56A3Q8NH54 315 aa13.07□□□□□ -0.32
VMP1-217ENST00000593168 OR5K2Q8NHB8 316 aa13.07□□□□□ -0.32
VMP1-217ENST00000593168 AGR3Q8TD06 166 aa13.07□□□□□ -0.32
VMP1-217ENST00000593168 INSM2Q96T92 566 aaPredicted RBP13.07□□□□□ -0.32
VMP1-217ENST00000593168 NTMT1Q9BV86 223 aa13.07□□□□□ -0.32
VMP1-217ENST00000593168 GTPBP2Q9BX10 602 aaKnown RBP13.07□□□□□ -0.32
VMP1-217ENST00000593168 OSGEPL1Q9H4B0 414 aa13.07□□□□□ -0.32
VMP1-217ENST00000593168 NOL11Q9H8H0 719 aaKnown RBP13.07□□□□□ -0.32
VMP1-217ENST00000593168 IPPKQ9H8X2 491 aa13.07□□□□□ -0.32
VMP1-217ENST00000593168 TNFRSF12AQ9NP84 129 aa13.07□□□□□ -0.32
VMP1-217ENST00000593168 PNMA8BQ9ULN7 279 aaPredicted RBP13.07□□□□□ -0.32
VMP1-217ENST00000593168 SLC6A14Q9UN76 642 aa13.07□□□□□ -0.32
VMP1-217ENST00000593168 PSMD13Q9UNM6 376 aa13.07□□□□□ -0.32
VMP1-217ENST00000593168 WDR37Q9Y2I8 494 aa13.07□□□□□ -0.32
VMP1-217ENST00000593168 SMG1Q96Q15 3661 aaKnown RBP13.06□□□□□ -0.32
VMP1-217ENST00000593168 PDZK1P1A8MUH7 402 aa13.06□□□□□ -0.32
VMP1-217ENST00000593168 OR7A17O14581 309 aa13.06□□□□□ -0.32
VMP1-217ENST00000593168 DCTN3O75935 186 aa13.06□□□□□ -0.32
VMP1-217ENST00000593168 WDR47O94967 919 aa13.06□□□□□ -0.32
VMP1-217ENST00000593168 SLC16A8O95907 504 aa13.06□□□□□ -0.32
VMP1-217ENST00000593168 RPL10P27635 214 aaKnown RBP13.06□□□□□ -0.32
VMP1-217ENST00000593168 IMPA1P29218 277 aa13.06□□□□□ -0.32
VMP1-217ENST00000593168 INHBCP55103 352 aa13.06□□□□□ -0.32
VMP1-217ENST00000593168 CDC16Q13042 620 aa13.06□□□□□ -0.32
VMP1-217ENST00000593168 GRB7Q14451 532 aa13.06□□□□□ -0.32
VMP1-217ENST00000593168 ARHGAP19Q14CB8 494 aa13.06□□□□□ -0.32
VMP1-217ENST00000593168 UGT3A2Q3SY77 523 aa13.06□□□□□ -0.32
VMP1-217ENST00000593168 WDR45BQ5MNZ6 344 aa13.06□□□□□ -0.32
VMP1-217ENST00000593168 KANK2Q63ZY3 851 aa13.06□□□□□ -0.32
VMP1-217ENST00000593168 FOXR1Q6PIV2 292 aa13.06□□□□□ -0.32
VMP1-217ENST00000593168 ZNF771Q7L3S4 317 aaPredicted RBP13.06□□□□□ -0.32
VMP1-217ENST00000593168 EFL1Q7Z2Z2 1120 aaKnown RBP13.06□□□□□ -0.32
VMP1-217ENST00000593168 SYVN1Q86TM6 617 aa13.06□□□□□ -0.32
VMP1-217ENST00000593168 PROSER1Q86XN7 944 aa13.06□□□□□ -0.32
VMP1-217ENST00000593168 PHC3Q8NDX5 983 aa13.06□□□□□ -0.32
VMP1-217ENST00000593168 C1orf216Q8TAB5 229 aa13.06□□□□□ -0.32
VMP1-217ENST00000593168 ZNF480Q8WV37 535 aa13.06□□□□□ -0.32
VMP1-217ENST00000593168 ATP6V1E2Q96A05 226 aa13.06□□□□□ -0.32
VMP1-217ENST00000593168 HSPA12BQ96MM6 686 aa13.06□□□□□ -0.32
VMP1-217ENST00000593168 EBF4Q9BQW3 602 aa13.06□□□□□ -0.32
VMP1-217ENST00000593168 TMEM168Q9H0V1 697 aa13.06□□□□□ -0.32
VMP1-217ENST00000593168 ATG10Q9H0Y0 220 aa13.06□□□□□ -0.32
VMP1-217ENST00000593168 TRIT1Q9H3H1 467 aaKnown RBP13.06□□□□□ -0.32
VMP1-217ENST00000593168 MVB12BQ9H7P6 319 aa13.06□□□□□ -0.32
VMP1-217ENST00000593168 CAPN10Q9HC96 672 aa13.06□□□□□ -0.32
VMP1-217ENST00000593168 DNAJC11Q9NVH1 559 aa13.06□□□□□ -0.32
VMP1-217ENST00000593168 HEY2Q9UBP5 337 aa13.06□□□□□ -0.32
VMP1-217ENST00000593168 ZNF225Q9UK10 706 aa13.06□□□□□ -0.32
VMP1-217ENST00000593168 ST14Q9Y5Y6 855 aa13.06□□□□□ -0.32
VMP1-217ENST00000593168 CCT8L1PA6NM43 557 aa13.05□□□□□ -0.32
VMP1-217ENST00000593168 TMEM233B4DJY2 109 aa13.05□□□□□ -0.32
VMP1-217ENST00000593168 TLR4O00206 839 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms