RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 INTS7Q9NVH2 962 aaKnown RBP19.65■□□□□ 0.74
TRIM47-207ENST00000593089 ASF1BQ9NVP2 202 aa19.65■□□□□ 0.74
TRIM47-207ENST00000593089 PAK5Q9P286 719 aa19.65■□□□□ 0.74
TRIM47-207ENST00000593089 GUCA1BQ9UMX6 200 aa19.65■□□□□ 0.74
TRIM47-207ENST00000593089 SPTBN1Q01082 2364 aaKnown RBP19.65■□□□□ 0.74
TRIM47-207ENST00000593089 PCM1Q15154 2024 aa19.64■□□□□ 0.74
TRIM47-207ENST00000593089 AGPSO00116 658 aa19.64■□□□□ 0.73
TRIM47-207ENST00000593089 KLHL41O60662 606 aa19.64■□□□□ 0.73
TRIM47-207ENST00000593089 SLCO2B1O94956 709 aa19.64■□□□□ 0.73
TRIM47-207ENST00000593089 RPL22P35268 128 aaKnown RBP19.64■□□□□ 0.73
TRIM47-207ENST00000593089 TTPAP49638 278 aa19.64■□□□□ 0.73
TRIM47-207ENST00000593089 CRADDP78560 199 aa19.64■□□□□ 0.73
TRIM47-207ENST00000593089 NR6A1Q15406 480 aa19.64■□□□□ 0.73
TRIM47-207ENST00000593089 ZC3H12BQ5HYM0 836 aaKnown RBP19.64■□□□□ 0.73
TRIM47-207ENST00000593089 GSDMBQ8TAX9 411 aa19.64■□□□□ 0.73
TRIM47-207ENST00000593089 SKA2Q8WVK7 121 aaPredicted RBP19.64■□□□□ 0.73
TRIM47-207ENST00000593089 ZBTB20Q9HC78 741 aaPredicted RBP19.64■□□□□ 0.73
TRIM47-207ENST00000593089 CUTCQ9NTM9 273 aa19.64■□□□□ 0.73
TRIM47-207ENST00000593089 CUEDC1Q9NWM3 386 aaPredicted RBP19.64■□□□□ 0.73
TRIM47-207ENST00000593089 CDC23Q9UJX2 597 aa19.64■□□□□ 0.73
TRIM47-207ENST00000593089 A1L4Q6 167 aa19.63■□□□□ 0.73
TRIM47-207ENST00000593089 DSCR3O14972 297 aa19.63■□□□□ 0.73
TRIM47-207ENST00000593089 ALOX12BO75342 701 aa19.63■□□□□ 0.73
TRIM47-207ENST00000593089 IPO13O94829 963 aaKnown RBP19.63■□□□□ 0.73
TRIM47-207ENST00000593089 PIM1P11309 404 aaPredicted RBP19.63■□□□□ 0.73
TRIM47-207ENST00000593089 ITGA3P26006 1051 aa19.63■□□□□ 0.73
TRIM47-207ENST00000593089 BDKRB1P46663 353 aa19.63■□□□□ 0.73
TRIM47-207ENST00000593089 TTC23LQ6PF05 361 aa19.63■□□□□ 0.73
TRIM47-207ENST00000593089 IGFL3Q6UXB1 125 aa19.63■□□□□ 0.73
TRIM47-207ENST00000593089 OVCH1Q7RTY7 1134 aa19.63■□□□□ 0.73
TRIM47-207ENST00000593089 GAS2L3Q86XJ1 694 aa19.63■□□□□ 0.73
TRIM47-207ENST00000593089 ZADH2Q8N4Q0 377 aa19.63■□□□□ 0.73
TRIM47-207ENST00000593089 METTL27Q8N6F8 245 aaPredicted RBP19.63■□□□□ 0.73
TRIM47-207ENST00000593089 DENND1AQ8TEH3 1009 aa19.63■□□□□ 0.73
TRIM47-207ENST00000593089 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.63■□□□□ 0.73
TRIM47-207ENST00000593089 TM9SF4Q92544 642 aa19.63■□□□□ 0.73
TRIM47-207ENST00000593089 FKBP10Q96AY3 582 aa19.63■□□□□ 0.73
TRIM47-207ENST00000593089 PANX3Q96QZ0 392 aa19.63■□□□□ 0.73
TRIM47-207ENST00000593089 SELENOSQ9BQE4 189 aa19.63■□□□□ 0.73
TRIM47-207ENST00000593089 P2RY12Q9H244 342 aa19.63■□□□□ 0.73
TRIM47-207ENST00000593089 SLC6A20Q9NP91 592 aa19.63■□□□□ 0.73
TRIM47-207ENST00000593089 GNPTGQ9UJJ9 305 aa19.63■□□□□ 0.73
TRIM47-207ENST00000593089 FBXL4Q9UKA2 621 aa19.63■□□□□ 0.73
TRIM47-207ENST00000593089 TTC7AQ9ULT0 858 aaPredicted RBP19.63■□□□□ 0.73
TRIM47-207ENST00000593089 RUVBL2Q9Y230 463 aaKnown RBP19.63■□□□□ 0.73
TRIM47-207ENST00000593089 NFS1Q9Y697 457 aa19.63■□□□□ 0.73
TRIM47-207ENST00000593089 KRT87PA6NCN2 255 aa19.62■□□□□ 0.73
TRIM47-207ENST00000593089 NDUFS3O75489 264 aa19.62■□□□□ 0.73
TRIM47-207ENST00000593089 MMP11P24347 488 aa19.62■□□□□ 0.73
TRIM47-207ENST00000593089 PSMB5P28074 263 aa19.62■□□□□ 0.73
TRIM47-207ENST00000593089 SOX8P57073 446 aa19.62■□□□□ 0.73
TRIM47-207ENST00000593089 BASP1P80723 227 aaKnown RBP19.62■□□□□ 0.73
TRIM47-207ENST00000593089 AIMP2Q13155 320 aaKnown RBP19.62■□□□□ 0.73
TRIM47-207ENST00000593089 GRM7Q14831 915 aa19.62■□□□□ 0.73
TRIM47-207ENST00000593089 NKG7Q16617 165 aa19.62■□□□□ 0.73
TRIM47-207ENST00000593089 CCSMST1Q4G0I0 132 aa19.62■□□□□ 0.73
TRIM47-207ENST00000593089 TCTE1Q5JU00 501 aa19.62■□□□□ 0.73
TRIM47-207ENST00000593089 SHISA6Q6ZSJ9 500 aa19.62■□□□□ 0.73
TRIM47-207ENST00000593089 COX15Q7KZN9 410 aa19.62■□□□□ 0.73
TRIM47-207ENST00000593089 OTUD6BQ8N6M0 293 aa19.62■□□□□ 0.73
TRIM47-207ENST00000593089 TTC29Q8NA56 475 aaPredicted RBP19.62■□□□□ 0.73
TRIM47-207ENST00000593089 INPP5DQ92835 1189 aa19.62■□□□□ 0.73
TRIM47-207ENST00000593089 RAD51AP1Q96B01 352 aa19.62■□□□□ 0.73
TRIM47-207ENST00000593089 RAB11FIP5Q9BXF6 653 aa19.62■□□□□ 0.73
TRIM47-207ENST00000593089 SOX17Q9H6I2 414 aaPredicted RBP19.62■□□□□ 0.73
TRIM47-207ENST00000593089 TREX1Q9NSU2 369 aa19.62■□□□□ 0.73
TRIM47-207ENST00000593089 PRICKLE3O43900 615 aaPredicted RBP19.61■□□□□ 0.73
TRIM47-207ENST00000593089 C1orf105O95561 183 aa19.61■□□□□ 0.73
TRIM47-207ENST00000593089 ALBP02768 609 aa19.61■□□□□ 0.73
TRIM47-207ENST00000593089 NMBRP28336 390 aa19.61■□□□□ 0.73
TRIM47-207ENST00000593089 GLRBP48167 497 aa19.61■□□□□ 0.73
TRIM47-207ENST00000593089 EIF3BP55884 814 aaKnown RBP19.61■□□□□ 0.73
TRIM47-207ENST00000593089 VSX2P58304 361 aaPredicted RBP19.61■□□□□ 0.73
TRIM47-207ENST00000593089 OTOAQ7RTW8 1153 aa19.61■□□□□ 0.73
TRIM47-207ENST00000593089 SPSB2Q99619 263 aa19.61■□□□□ 0.73
TRIM47-207ENST00000593089 MIPEPQ99797 713 aa19.61■□□□□ 0.73
TRIM47-207ENST00000593089 TSGA10Q9BZW7 698 aa19.61■□□□□ 0.73
TRIM47-207ENST00000593089 WDR54Q9H977 334 aa19.61■□□□□ 0.73
TRIM47-207ENST00000593089 EIF2B3Q9NR50 452 aaKnown RBP19.61■□□□□ 0.73
TRIM47-207ENST00000593089 TSR3Q9UJK0 312 aaKnown RBP19.61■□□□□ 0.73
TRIM47-207ENST00000593089 SOCS6O14544 535 aa19.6■□□□□ 0.73
TRIM47-207ENST00000593089 KPNA5O15131 536 aa19.6■□□□□ 0.73
TRIM47-207ENST00000593089 CTSVO60911 334 aa19.6■□□□□ 0.73
TRIM47-207ENST00000593089 CBX6O95503 412 aa19.6■□□□□ 0.73
TRIM47-207ENST00000593089 ONECUT2O95948 504 aa19.6■□□□□ 0.73
TRIM47-207ENST00000593089 CDC25BP30305 580 aa19.6■□□□□ 0.73
TRIM47-207ENST00000593089 OR1D4P47884 311 aa19.6■□□□□ 0.73
TRIM47-207ENST00000593089 RPS6KA1Q15418 735 aa19.6■□□□□ 0.73
TRIM47-207ENST00000593089 SIX1Q15475 284 aaPredicted RBP19.6■□□□□ 0.73
TRIM47-207ENST00000593089 CCNG2Q16589 344 aa19.6■□□□□ 0.73
TRIM47-207ENST00000593089 MEI1Q5TIA1 1274 aa19.6■□□□□ 0.73
TRIM47-207ENST00000593089 YOD1Q5VVQ6 348 aaPredicted RBP19.6■□□□□ 0.73
TRIM47-207ENST00000593089 PRAMEF13Q5VWM6 474 aa19.6■□□□□ 0.73
TRIM47-207ENST00000593089 CNSTQ6PJW8 725 aa19.6■□□□□ 0.73
TRIM47-207ENST00000593089 Q6ZS92 163 aa19.6■□□□□ 0.73
TRIM47-207ENST00000593089 LRRC6Q86X45 466 aa19.6■□□□□ 0.73
TRIM47-207ENST00000593089 RAB42Q8N4Z0 105 aa19.6■□□□□ 0.73
TRIM47-207ENST00000593089 DTWD1Q8N5C7 304 aa19.6■□□□□ 0.73
TRIM47-207ENST00000593089 ZUFSPQ96AP4 578 aa19.6■□□□□ 0.73
TRIM47-207ENST00000593089 NACC2Q96BF6 587 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms