RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 ADARP55265 1226 aaKnown RBP12.75□□□□□ -0.37
APOC1-209ENST00000592885 GRM7Q14831 915 aa12.75□□□□□ -0.37
APOC1-209ENST00000592885 CYP2A13Q16696 494 aa12.75□□□□□ -0.37
APOC1-209ENST00000592885 TYSND1Q2T9J0 566 aa12.75□□□□□ -0.37
APOC1-209ENST00000592885 LRRC8BQ6P9F7 803 aa12.75□□□□□ -0.37
APOC1-209ENST00000592885 IGFL3Q6UXB1 125 aa12.75□□□□□ -0.37
APOC1-209ENST00000592885 GSTA5Q7RTV2 222 aa12.75□□□□□ -0.37
APOC1-209ENST00000592885 OTOAQ7RTW8 1153 aa12.75□□□□□ -0.37
APOC1-209ENST00000592885 SDCCAG8Q86SQ7 713 aaPredicted RBP12.75□□□□□ -0.37
APOC1-209ENST00000592885 MCATQ8IVS2 390 aaKnown RBP12.75□□□□□ -0.37
APOC1-209ENST00000592885 KRT222Q8N1A0 295 aa12.75□□□□□ -0.37
APOC1-209ENST00000592885 GALNT16Q8N428 558 aa12.75□□□□□ -0.37
APOC1-209ENST00000592885 TTC29Q8NA56 475 aaPredicted RBP12.75□□□□□ -0.37
APOC1-209ENST00000592885 TRIM58Q8NG06 486 aa12.75□□□□□ -0.37
APOC1-209ENST00000592885 CFAP61Q8NHU2 1237 aa12.75□□□□□ -0.37
APOC1-209ENST00000592885 TM9SF4Q92544 642 aa12.75□□□□□ -0.37
APOC1-209ENST00000592885 ZUFSPQ96AP4 578 aa12.75□□□□□ -0.37
APOC1-209ENST00000592885 ZNF285Q96NJ3 590 aa12.75□□□□□ -0.37
APOC1-209ENST00000592885 TCF12Q99081 682 aa12.75□□□□□ -0.37
APOC1-209ENST00000592885 SLC26A1Q9H2B4 701 aa12.75□□□□□ -0.37
APOC1-209ENST00000592885 SLAMF7Q9NQ25 335 aa12.75□□□□□ -0.37
APOC1-209ENST00000592885 P4HTMQ9NXG6 502 aa12.75□□□□□ -0.37
APOC1-209ENST00000592885 IL1RAPL1Q9NZN1 696 aa12.75□□□□□ -0.37
APOC1-209ENST00000592885 NXT1Q9UKK6 140 aaKnown RBP12.75□□□□□ -0.37
APOC1-209ENST00000592885 SHANK1Q9Y566 2161 aa12.75□□□□□ -0.37
APOC1-209ENST00000592885 FAM169AQ9Y6X4 670 aa12.75□□□□□ -0.37
APOC1-209ENST00000592885 FITM1A5D6W6 292 aa12.74□□□□□ -0.37
APOC1-209ENST00000592885 A6NL46 340 aa12.74□□□□□ -0.37
APOC1-209ENST00000592885 CYSRT1A8MQ03 144 aa12.74□□□□□ -0.37
APOC1-209ENST00000592885 PRICKLE3O43900 615 aaPredicted RBP12.74□□□□□ -0.37
APOC1-209ENST00000592885 C1orf105O95561 183 aa12.74□□□□□ -0.37
APOC1-209ENST00000592885 ESR1P03372 595 aa12.74□□□□□ -0.37
APOC1-209ENST00000592885 UMODP07911 640 aa12.74□□□□□ -0.37
APOC1-209ENST00000592885 OGNP20774 298 aaKnown RBP12.74□□□□□ -0.37
APOC1-209ENST00000592885 SARNPP82979 210 aaKnown RBP12.74□□□□□ -0.37
APOC1-209ENST00000592885 SF1Q15637 639 aaKnown RBP12.74□□□□□ -0.37
APOC1-209ENST00000592885 INPP5JQ15735 1006 aaPredicted RBP12.74□□□□□ -0.37
APOC1-209ENST00000592885 FHL5Q5TD97 284 aa12.74□□□□□ -0.37
APOC1-209ENST00000592885 FCRL6Q6DN72 434 aa12.74□□□□□ -0.37
APOC1-209ENST00000592885 KIAA0930Q6ICG6 404 aaPredicted RBP12.74□□□□□ -0.37
APOC1-209ENST00000592885 FIGLAQ6QHK4 219 aa12.74□□□□□ -0.37
APOC1-209ENST00000592885 PPP1R32Q7Z5V6 425 aa12.74□□□□□ -0.37
APOC1-209ENST00000592885 LDB1Q86U70 411 aaPredicted RBP12.74□□□□□ -0.37
APOC1-209ENST00000592885 IQCKQ8N0W5 287 aa12.74□□□□□ -0.37
APOC1-209ENST00000592885 RBMXL3Q8N7X1 1067 aaKnown RBP12.74□□□□□ -0.37
APOC1-209ENST00000592885 LMNTD1Q8N9Z9 388 aa12.74□□□□□ -0.37
APOC1-209ENST00000592885 Q8NA96 180 aa12.74□□□□□ -0.37
APOC1-209ENST00000592885 VPS50Q96JG6 964 aa12.74□□□□□ -0.37
APOC1-209ENST00000592885 IL17FQ96PD4 163 aa12.74□□□□□ -0.37
APOC1-209ENST00000592885 PSMG3-AS1Q96PY0 264 aa12.74□□□□□ -0.37
APOC1-209ENST00000592885 SELENOSQ9BQE4 189 aa12.74□□□□□ -0.37
APOC1-209ENST00000592885 CUTCQ9NTM9 273 aa12.74□□□□□ -0.37
APOC1-209ENST00000592885 CUEDC1Q9NWM3 386 aaPredicted RBP12.74□□□□□ -0.37
APOC1-209ENST00000592885 SOX13Q9UN79 622 aa12.74□□□□□ -0.37
APOC1-209ENST00000592885 VPS9D1Q9Y2B5 631 aa12.74□□□□□ -0.37
APOC1-209ENST00000592885 NAV2Q8IVL1 2488 aa12.74□□□□□ -0.37
APOC1-209ENST00000592885 ANKRD12Q6UB98 2062 aa12.74□□□□□ -0.37
APOC1-209ENST00000592885 USP9XQ93008 2570 aaPredicted RBP12.74□□□□□ -0.37
APOC1-209ENST00000592885 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.73□□□□□ -0.37
APOC1-209ENST00000592885 AGPSO00116 658 aa12.73□□□□□ -0.37
APOC1-209ENST00000592885 SRPX2O60687 465 aaPredicted RBP12.73□□□□□ -0.37
APOC1-209ENST00000592885 PHF2O75151 1096 aa12.73□□□□□ -0.37
APOC1-209ENST00000592885 CNOT3O75175 753 aaKnown RBP12.73□□□□□ -0.37
APOC1-209ENST00000592885 CTSBP07858 339 aa12.73□□□□□ -0.37
APOC1-209ENST00000592885 PAMP19021 973 aa12.73□□□□□ -0.37
APOC1-209ENST00000592885 GNLYP22749 145 aa12.73□□□□□ -0.37
APOC1-209ENST00000592885 MMP11P24347 488 aa12.73□□□□□ -0.37
APOC1-209ENST00000592885 ARNTP27540 789 aa12.73□□□□□ -0.37
APOC1-209ENST00000592885 NMBRP28336 390 aa12.73□□□□□ -0.37
APOC1-209ENST00000592885 MAGEA6P43360 314 aa12.73□□□□□ -0.37
APOC1-209ENST00000592885 UQCRFS1P47985 274 aa12.73□□□□□ -0.37
APOC1-209ENST00000592885 EIF3BP55884 814 aaKnown RBP12.73□□□□□ -0.37
APOC1-209ENST00000592885 CRADDP78560 199 aa12.73□□□□□ -0.37
APOC1-209ENST00000592885 AIMP2Q13155 320 aaKnown RBP12.73□□□□□ -0.37
APOC1-209ENST00000592885 GBX1Q14549 363 aa12.73□□□□□ -0.37
APOC1-209ENST00000592885 SLC9A5Q14940 896 aa12.73□□□□□ -0.37
APOC1-209ENST00000592885 FAM214AQ32MH5 1076 aa12.73□□□□□ -0.37
APOC1-209ENST00000592885 CTSL3PQ5NE16 218 aa12.73□□□□□ -0.37
APOC1-209ENST00000592885 TTLL10Q6ZVT0 673 aa12.73□□□□□ -0.37
APOC1-209ENST00000592885 RNF44Q7L0R7 432 aa12.73□□□□□ -0.37
APOC1-209ENST00000592885 OVCH1Q7RTY7 1134 aa12.73□□□□□ -0.37
APOC1-209ENST00000592885 TAX1BP1Q86VP1 789 aa12.73□□□□□ -0.37
APOC1-209ENST00000592885 OTUD6BQ8N6M0 293 aa12.73□□□□□ -0.37
APOC1-209ENST00000592885 SKA2Q8WVK7 121 aaPredicted RBP12.73□□□□□ -0.37
APOC1-209ENST00000592885 LPGAT1Q92604 370 aa12.73□□□□□ -0.37
APOC1-209ENST00000592885 BIRC8Q96P09 236 aa12.73□□□□□ -0.37
APOC1-209ENST00000592885 ATP13A2Q9NQ11 1180 aa12.73□□□□□ -0.37
APOC1-209ENST00000592885 SLC22A11Q9NSA0 550 aa12.73□□□□□ -0.37
APOC1-209ENST00000592885 SYBUQ9NX95 663 aa12.73□□□□□ -0.37
APOC1-209ENST00000592885 TTC7AQ9ULT0 858 aaPredicted RBP12.73□□□□□ -0.37
APOC1-209ENST00000592885 B3GNT3Q9Y2A9 372 aa12.73□□□□□ -0.37
APOC1-209ENST00000592885 USP9YO00507 2555 aaPredicted RBP12.73□□□□□ -0.37
APOC1-209ENST00000592885 CCDC88CQ9P219 2028 aa12.72□□□□□ -0.37
APOC1-209ENST00000592885 BLACEA4D250 179 aa12.72□□□□□ -0.37
APOC1-209ENST00000592885 AGFG2O95081 481 aa12.72□□□□□ -0.37
APOC1-209ENST00000592885 VAPBO95292 243 aa12.72□□□□□ -0.37
APOC1-209ENST00000592885 MATN4O95460 622 aa12.72□□□□□ -0.37
APOC1-209ENST00000592885 ERGP11308 486 aa12.72□□□□□ -0.37
APOC1-209ENST00000592885 ITGAXP20702 1163 aa12.72□□□□□ -0.37
APOC1-209ENST00000592885 ALAS2P22557 587 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms